Protein–RNA interactions for Protein: P62891

RPL39, 60S ribosomal protein L39, humanhuman

Known RBP Predictions only

Length 51 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPL39P62891 R3HDML-201ENST00000217043 1377 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
RPL39P62891 CLDN6-201ENST00000328796 1369 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
RPL39P62891 PES1-201ENST00000335214 1988 ntAPPRIS ALT1 TSL 1 (best) BASIC11.07□□□□□ -0.64
RPL39P62891 MLXIPL-205ENST00000429400 3173 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
RPL39P62891 SLC35C2-204ENST00000372230 2246 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
RPL39P62891 TNIP1-214ENST00000522226 2238 ntAPPRIS P3 TSL 2 BASIC11.07□□□□□ -0.64
RPL39P62891 SEC14L4-204ENST00000381982 1603 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
RPL39P62891 TCTN1-202ENST00000397655 1879 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
RPL39P62891 DUOXA1-216ENST00000613425 1867 ntTSL 5 BASIC11.07□□□□□ -0.64
RPL39P62891 TMEM171-201ENST00000287773 1247 ntAPPRIS ALT1 TSL 5 BASIC11.07□□□□□ -0.64
RPL39P62891 OR10H5-201ENST00000308940 1132 ntAPPRIS P1 BASIC11.07□□□□□ -0.64
RPL39P62891 MED22-202ENST00000371999 987 ntTSL 3 BASIC11.07□□□□□ -0.64
RPL39P62891 TCEAL3-203ENST00000372628 1221 ntAPPRIS P1 TSL 5 BASIC11.07□□□□□ -0.64
RPL39P62891 GPN2-202ENST00000374135 4678 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
RPL39P62891 ABCG1-205ENST00000398449 2998 ntAPPRIS ALT1 TSL 1 (best) BASIC11.07□□□□□ -0.64
RPL39P62891 DANCR-201ENST00000411630 904 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
RPL39P62891 TSPY19P-201ENST00000418461 509 ntBASIC11.07□□□□□ -0.64
RPL39P62891 AC062015.1-201ENST00000423838 1134 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
RPL39P62891 TSPY18P-201ENST00000441642 509 ntBASIC11.07□□□□□ -0.64
RPL39P62891 TXNRD2-212ENST00000485358 850 ntTSL 2 BASIC11.07□□□□□ -0.64
RPL39P62891 POLD4-207ENST00000531239 584 ntTSL 2 BASIC11.07□□□□□ -0.64
RPL39P62891 TRMT112-202ENST00000535126 704 ntTSL 2 BASIC11.07□□□□□ -0.64
RPL39P62891 RPL28-209ENST00000560055 670 ntTSL 3 BASIC11.07□□□□□ -0.64
RPL39P62891 AC012640.2-201ENST00000561606 901 ntBASIC11.07□□□□□ -0.64
RPL39P62891 PAM16-215ENST00000577031 548 ntTSL 4 BASIC11.07□□□□□ -0.64
RPL39P62891 AC040963.1-202ENST00000589729 644 ntTSL 5 BASIC11.07□□□□□ -0.64
RPL39P62891 AC104581.1-203ENST00000640240 353 ntTSL 2 BASIC11.07□□□□□ -0.64
RPL39P62891 CYP4X1-201ENST00000371901 2357 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
RPL39P62891 HNF1B-201ENST00000613727 1546 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
RPL39P62891 DDN-201ENST00000421952 3749 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
RPL39P62891 GLIS2-202ENST00000433375 3705 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
RPL39P62891 SEZ6L-202ENST00000343706 2898 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
RPL39P62891 HSDL2-202ENST00000398805 3350 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
RPL39P62891 TBCE-202ENST00000406207 2012 ntAPPRIS P3 TSL 5 BASIC11.07□□□□□ -0.64
RPL39P62891 ZNF384-202ENST00000355772 2514 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
RPL39P62891 NDFIP2-205ENST00000612570 4648 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
RPL39P62891 KIAA0319-204ENST00000537886 6622 ntAPPRIS ALT2 TSL 1 (best) BASIC11.07□□□□□ -0.64
RPL39P62891 MBD6-201ENST00000355673 4282 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
RPL39P62891 MAGEA12-201ENST00000357916 1664 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
RPL39P62891 HSPB7-202ENST00000375718 2415 ntTSL 2 BASIC11.07□□□□□ -0.64
RPL39P62891 KIF1A-201ENST00000320389 8832 ntAPPRIS P1 TSL 5 BASIC11.07□□□□□ -0.64
RPL39P62891 GIPC2-201ENST00000370759 3847 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
RPL39P62891 OS9-204ENST00000389146 2091 ntTSL 2 BASIC11.07□□□□□ -0.64
RPL39P62891 TRMT10C-201ENST00000309922 1819 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
RPL39P62891 DDIAS-203ENST00000525361 1830 ntAPPRIS ALT2 TSL 2 BASIC11.07□□□□□ -0.64
RPL39P62891 MFSD4A-207ENST00000536357 1841 ntTSL 2 BASIC11.07□□□□□ -0.64
RPL39P62891 FAM131A-207ENST00000450976 1335 ntTSL 3 BASIC11.07□□□□□ -0.64
RPL39P62891 SMAD2-202ENST00000356825 10445 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
RPL39P62891 SEMA3F-202ENST00000413852 3212 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
RPL39P62891 RPL15-201ENST00000307839 2730 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
RPL39P62891 CCP110-203ENST00000396212 5549 ntAPPRIS P3 TSL 1 (best) BASIC11.07□□□□□ -0.64
RPL39P62891 DUS4L-201ENST00000265720 2220 ntAPPRIS P1 TSL 2 BASIC11.07□□□□□ -0.64
RPL39P62891 MARK3-205ENST00000429436 3371 ntAPPRIS ALT1 TSL 1 (best) BASIC11.07□□□□□ -0.64
RPL39P62891 AC097359.2-201ENST00000604992 2389 ntBASIC11.06□□□□□ -0.64
RPL39P62891 AFDN-203ENST00000366806 5962 ntTSL 1 (best) BASIC11.06□□□□□ -0.64
RPL39P62891 APBB1IP-202ENST00000376236 2771 ntAPPRIS P1 TSL 5 BASIC11.06□□□□□ -0.64
RPL39P62891 PURA-201ENST00000331327 11497 ntAPPRIS P1 BASIC11.06□□□□□ -0.64
RPL39P62891 PREP-201ENST00000369110 2905 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
RPL39P62891 UMODL1-203ENST00000400424 5516 ntAPPRIS ALT2 TSL 1 (best) BASIC11.06□□□□□ -0.64
RPL39P62891 PCDHGB5-202ENST00000621169 2670 ntAPPRIS ALT2 BASIC11.06□□□□□ -0.64
RPL39P62891 ARHGAP45-206ENST00000586866 4120 ntAPPRIS ALT2 TSL 1 (best) BASIC11.06□□□□□ -0.64
RPL39P62891 IL20RA-201ENST00000316649 3485 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
RPL39P62891 CCT3-201ENST00000295688 2150 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
RPL39P62891 EEF1AKMT3-201ENST00000300209 2563 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
RPL39P62891 AC058822.1-201ENST00000507166 2550 ntAPPRIS P1 TSL 2 BASIC11.06□□□□□ -0.64
RPL39P62891 FHL2-205ENST00000393353 1531 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
RPL39P62891 SGSH-203ENST00000570923 1546 ntTSL 2 BASIC11.06□□□□□ -0.64
RPL39P62891 BX640514.1-201ENST00000583223 1918 ntBASIC11.06□□□□□ -0.64
RPL39P62891 APBB1-218ENST00000608655 1920 ntTSL 5 BASIC11.06□□□□□ -0.64
RPL39P62891 AC068946.1-202ENST00000318673 2745 ntAPPRIS P1 TSL 2 BASIC11.06□□□□□ -0.64
RPL39P62891 PDPR-202ENST00000398122 2734 ntTSL 2 BASIC11.06□□□□□ -0.64
RPL39P62891 ZNF663P-201ENST00000400371 2722 ntTSL 1 (best) BASIC11.06□□□□□ -0.64
RPL39P62891 KIAA1211L-201ENST00000397899 3907 ntAPPRIS P2 TSL 1 (best) BASIC11.06□□□□□ -0.64
RPL39P62891 AC027601.5-201ENST00000624065 2482 ntBASIC11.06□□□□□ -0.64
RPL39P62891 GUK1-203ENST00000366718 1275 ntAPPRIS P3 TSL 3 BASIC11.06□□□□□ -0.64
RPL39P62891 IGKV4-1-201ENST00000390243 538 ntAPPRIS P1 BASIC11.06□□□□□ -0.64
RPL39P62891 FAM3A-205ENST00000393572 1041 ntTSL 2 BASIC11.06□□□□□ -0.64
RPL39P62891 KRTCAP3-202ENST00000407293 942 ntTSL 2 BASIC11.06□□□□□ -0.64
RPL39P62891 LINC01273-201ENST00000411453 685 ntTSL 2 BASIC11.06□□□□□ -0.64
RPL39P62891 MYCNOS-201ENST00000419083 770 ntTSL 1 (best) BASIC11.06□□□□□ -0.64
RPL39P62891 AC092474.2-201ENST00000424288 719 ntBASIC11.06□□□□□ -0.64
RPL39P62891 AC051649.1-201ENST00000509204 330 ntTSL 3 BASIC11.06□□□□□ -0.64
RPL39P62891 THTPA-204ENST00000554970 569 ntTSL 4 BASIC11.06□□□□□ -0.64
RPL39P62891 THTPA-206ENST00000556015 535 ntTSL 3 BASIC11.06□□□□□ -0.64
RPL39P62891 BRICD5-202ENST00000562360 783 ntTSL 2 BASIC11.06□□□□□ -0.64
RPL39P62891 FAM220A-205ENST00000578372 207 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
RPL39P62891 TXNDC12-205ENST00000610127 806 ntTSL 2 BASIC11.06□□□□□ -0.64
RPL39P62891 LILRA2-208ENST00000629481 661 ntTSL 2 BASIC11.06□□□□□ -0.64
RPL39P62891 CEACAM3-208ENST00000630848 1110 ntAPPRIS ALT2 TSL 5 BASIC11.06□□□□□ -0.64
RPL39P62891 NUBPL-201ENST00000281081 3049 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
RPL39P62891 CRCP-203ENST00000395326 3009 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
RPL39P62891 ADAMTS7P1-201ENST00000613213 4793 ntBASIC11.06□□□□□ -0.64
RPL39P62891 SEPT6-204ENST00000360156 2609 ntAPPRIS ALT1 TSL 1 (best) BASIC11.06□□□□□ -0.64
RPL39P62891 AFDN-205ENST00000392108 6812 ntTSL 1 (best) BASIC11.06□□□□□ -0.64
RPL39P62891 DDX49-201ENST00000247003 1830 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
RPL39P62891 CGN-201ENST00000271636 5091 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
RPL39P62891 PLTP-204ENST00000420868 1420 ntTSL 2 BASIC11.06□□□□□ -0.64
RPL39P62891 SIGLEC9-202ENST00000440804 1960 ntAPPRIS ALT2 TSL 2 BASIC11.06□□□□□ -0.64
RPL39P62891 CXorf36-201ENST00000377934 2513 ntTSL 1 (best) BASIC11.06□□□□□ -0.64
RPL39P62891 GGT1-202ENST00000400380 2540 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Retrieved 100 of 98,524 protein–RNA pairs in 69.3 ms