Protein–RNA interactions for Protein: P61966

AP1S1, AP-1 complex subunit sigma-1A, humanhuman

Predictions only

Length 158 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP1S1P61966 AC022613.1-201ENST00000536835 2530 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
AP1S1P61966 TMEM184A-201ENST00000297477 6276 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
AP1S1P61966 CU639417.3-201ENST00000624240 1404 ntBASIC15.62■□□□□ 0.09
AP1S1P61966 SIK3-201ENST00000375300 6213 ntAPPRIS P3 TSL 2 BASIC15.62■□□□□ 0.09
AP1S1P61966 DNAAF2-201ENST00000298292 2963 ntAPPRIS P3 TSL 1 (best) BASIC15.62■□□□□ 0.09
AP1S1P61966 SHMT2-202ENST00000414700 2006 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
AP1S1P61966 API5-202ENST00000420461 2009 ntTSL 2 BASIC15.62■□□□□ 0.09
AP1S1P61966 RASA4-204ENST00000462172 2634 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
AP1S1P61966 LENG8-209ENST00000616932 2825 ntAPPRIS ALT2 TSL 5 BASIC15.62■□□□□ 0.09
AP1S1P61966 SETD1B-201ENST00000267197 5772 ntAPPRIS ALT2 TSL 5 BASIC15.62■□□□□ 0.09
AP1S1P61966 FANK1-204ENST00000368695 1296 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
AP1S1P61966 FKBP1B-201ENST00000380986 952 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
AP1S1P61966 GRAP-202ENST00000395635 834 ntTSL 2 BASIC15.62■□□□□ 0.09
AP1S1P61966 WDR45-208ENST00000396681 1146 ntTSL 5 BASIC15.62■□□□□ 0.09
AP1S1P61966 BX322559.1-201ENST00000456613 319 ntTSL 3 BASIC15.62■□□□□ 0.09
AP1S1P61966 RN7SL752P-201ENST00000463779 287 ntBASIC15.62■□□□□ 0.09
AP1S1P61966 AC078785.1-203ENST00000467342 573 ntTSL 4 BASIC15.62■□□□□ 0.09
AP1S1P61966 HHEX-203ENST00000492654 808 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
AP1S1P61966 SERF1A-205ENST00000507348 663 ntTSL 2 BASIC15.62■□□□□ 0.09
AP1S1P61966 AC136475.2-201ENST00000526612 392 ntTSL 3 BASIC15.62■□□□□ 0.09
AP1S1P61966 AP001360.1-202ENST00000526934 479 ntTSL 3 BASIC15.62■□□□□ 0.09
AP1S1P61966 AC005225.4-201ENST00000557330 545 ntBASIC15.62■□□□□ 0.09
AP1S1P61966 AC090825.1-203ENST00000558188 582 ntTSL 3 BASIC15.62■□□□□ 0.09
AP1S1P61966 SPATA8-AS1-201ENST00000558722 465 ntTSL 3 BASIC15.62■□□□□ 0.09
AP1S1P61966 AC129507.3-201ENST00000571512 913 ntTSL 2 BASIC15.62■□□□□ 0.09
AP1S1P61966 PAM16-204ENST00000571941 674 ntTSL 3 BASIC15.62■□□□□ 0.09
AP1S1P61966 AL157392.3-207ENST00000601758 744 ntTSL 5 BASIC15.62■□□□□ 0.09
AP1S1P61966 LINC01515-215ENST00000608678 854 ntTSL 5 BASIC15.62■□□□□ 0.09
AP1S1P61966 AC012645.4-201ENST00000610691 1061 ntBASIC15.62■□□□□ 0.09
AP1S1P61966 PDLIM3-213ENST00000629667 1016 ntTSL 5 BASIC15.62■□□□□ 0.09
AP1S1P61966 AL033527.5-201ENST00000641382 801 ntBASIC15.62■□□□□ 0.09
AP1S1P61966 KLK6-203ENST00000391808 1478 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
AP1S1P61966 AC020915.1-201ENST00000413518 1469 ntAPPRIS ALT2 TSL 2 BASIC15.62■□□□□ 0.09
AP1S1P61966 ZNF789-201ENST00000331410 1654 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
AP1S1P61966 AL138799.1-201ENST00000448213 1675 ntBASIC15.62■□□□□ 0.09
AP1S1P61966 GFAP-225ENST00000638281 2099 ntTSL 5 BASIC15.62■□□□□ 0.09
AP1S1P61966 AC007495.1-201ENST00000501259 2678 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
AP1S1P61966 ZNF713-202ENST00000429591 4339 ntAPPRIS P2 TSL 5 BASIC15.62■□□□□ 0.09
AP1S1P61966 CPD-201ENST00000225719 9394 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
AP1S1P61966 LCK-206ENST00000373564 2137 ntTSL 5 BASIC15.62■□□□□ 0.09
AP1S1P61966 FBXO44-204ENST00000376762 1734 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
AP1S1P61966 DPEP1-202ENST00000393092 1734 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
AP1S1P61966 AP1M1-211ENST00000590756 1705 ntTSL 5 BASIC15.62■□□□□ 0.09
AP1S1P61966 PIAS4-201ENST00000262971 3159 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
AP1S1P61966 ASNS-201ENST00000175506 2356 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
AP1S1P61966 SLC29A1-209ENST00000427851 2171 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
AP1S1P61966 MGAT4B-202ENST00000337755 3027 ntTSL 2 BASIC15.62■□□□□ 0.09
AP1S1P61966 RUNDC3B-202ENST00000338056 4099 ntTSL 2 BASIC15.62■□□□□ 0.09
AP1S1P61966 NSUN5P1-204ENST00000428392 1562 ntTSL 2 BASIC15.62■□□□□ 0.09
AP1S1P61966 BCAR1-206ENST00000535626 2894 ntTSL 2 BASIC15.61■□□□□ 0.09
AP1S1P61966 HCFC1-201ENST00000310441 8869 ntAPPRIS P2 TSL 1 (best) BASIC15.61■□□□□ 0.09
AP1S1P61966 GRSF1-208ENST00000545193 2682 ntTSL 2 BASIC15.61■□□□□ 0.09
AP1S1P61966 SLITRK4-201ENST00000338017 3357 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
AP1S1P61966 JADE2-201ENST00000282605 2748 ntAPPRIS P1 TSL 2 BASIC15.61■□□□□ 0.09
AP1S1P61966 TIRAP-203ENST00000392680 2068 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
AP1S1P61966 MKS1-204ENST00000537529 2083 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
AP1S1P61966 PIP4K2A-206ENST00000545335 1436 ntTSL 2 BASIC15.61■□□□□ 0.09
AP1S1P61966 RASD2-201ENST00000216127 3412 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
AP1S1P61966 ELMSAN1-201ENST00000286523 8091 ntAPPRIS P2 TSL 1 (best) BASIC15.61■□□□□ 0.09
AP1S1P61966 EFR3B-203ENST00000402191 3685 ntTSL 5 BASIC15.61■□□□□ 0.09
AP1S1P61966 LAP3-211ENST00000618908 2100 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
AP1S1P61966 CNP-201ENST00000393888 2583 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
AP1S1P61966 ISLR-201ENST00000249842 2371 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
AP1S1P61966 CREB3L2-204ENST00000456390 2360 ntTSL 2 BASIC15.61■□□□□ 0.09
AP1S1P61966 ST6GALNAC6-216ENST00000622357 2396 ntAPPRIS ALT1 TSL 1 (best) BASIC15.61■□□□□ 0.09
AP1S1P61966 FLJ42969-201ENST00000514926 1948 ntTSL 2 BASIC15.61■□□□□ 0.09
AP1S1P61966 RNF168-201ENST00000318037 5347 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
AP1S1P61966 PRDM1-203ENST00000369096 5164 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
AP1S1P61966 NTRK2-205ENST00000376208 8178 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
AP1S1P61966 TSFM-201ENST00000323833 1218 ntAPPRIS ALT2 TSL 1 (best) BASIC15.61■□□□□ 0.09
AP1S1P61966 TNFRSF12A-202ENST00000341627 881 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
AP1S1P61966 STK40-202ENST00000373129 3846 ntAPPRIS P3 TSL 1 (best) BASIC15.61■□□□□ 0.09
AP1S1P61966 TEX26-AS1-201ENST00000411835 1203 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
AP1S1P61966 GHSR-202ENST00000427970 912 ntBASIC15.61■□□□□ 0.09
AP1S1P61966 LNCPRESS1-201ENST00000429254 756 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
AP1S1P61966 KRBOX4-207ENST00000487081 1247 ntAPPRIS ALT2 TSL 1 (best) BASIC15.61■□□□□ 0.09
AP1S1P61966 AC004066.1-201ENST00000502488 802 ntBASIC15.61■□□□□ 0.09
AP1S1P61966 AC005342.2-201ENST00000544163 315 ntTSL 3 BASIC15.61■□□□□ 0.09
AP1S1P61966 LINC02298-201ENST00000546968 965 ntTSL 5 BASIC15.61■□□□□ 0.09
AP1S1P61966 POLE2-203ENST00000553805 496 ntTSL 2 BASIC15.61■□□□□ 0.09
AP1S1P61966 AC105339.1-202ENST00000559535 1283 ntTSL 5 BASIC15.61■□□□□ 0.09
AP1S1P61966 GABARAPL2-202ENST00000563744 791 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
AP1S1P61966 AC005262.2-201ENST00000587701 452 ntTSL 5 BASIC15.61■□□□□ 0.09
AP1S1P61966 CU634019.7-201ENST00000624153 1185 ntBASIC15.61■□□□□ 0.09
AP1S1P61966 FP236241.2-201ENST00000624906 1185 ntBASIC15.61■□□□□ 0.09
AP1S1P61966 AC112693.3-201ENST00000624819 1983 ntBASIC15.61■□□□□ 0.09
AP1S1P61966 JRK-203ENST00000571961 2687 ntAPPRIS ALT2 TSL 1 (best) BASIC15.61■□□□□ 0.09
AP1S1P61966 CARMIL3-201ENST00000342740 4597 ntAPPRIS P1 TSL 5 BASIC15.61■□□□□ 0.09
AP1S1P61966 FAF1-202ENST00000396153 6817 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
AP1S1P61966 C18orf15-201ENST00000623680 2534 ntBASIC15.61■□□□□ 0.09
AP1S1P61966 RGR-201ENST00000358110 1349 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
AP1S1P61966 BPIFB2-201ENST00000170150 1898 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
AP1S1P61966 UCP2-201ENST00000310473 2113 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
AP1S1P61966 MRPL11-201ENST00000310999 1605 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
AP1S1P61966 GOLGA6L2-201ENST00000312015 1379 ntAPPRIS ALT2 TSL 2 BASIC15.61■□□□□ 0.09
AP1S1P61966 PLEKHA4-202ENST00000355496 2614 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
AP1S1P61966 SPRY1-207ENST00000610581 2608 ntAPPRIS P1 TSL 3 BASIC15.61■□□□□ 0.09
AP1S1P61966 SRCIN1-215ENST00000621492 4644 ntAPPRIS ALT2 TSL 5 BASIC15.61■□□□□ 0.09
AP1S1P61966 CYP4F22-202ENST00000601005 2445 ntAPPRIS P1 TSL 5 BASIC15.6■□□□□ 0.09
AP1S1P61966 FOXE1-201ENST00000375123 3462 ntAPPRIS P1 BASIC15.6■□□□□ 0.09
Retrieved 100 of 98,524 protein–RNA pairs in 49.9 ms