Protein–RNA interactions for Protein: P61073

CXCR4, C-X-C chemokine receptor type 4, humanhuman

Predictions only

Length 352 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CXCR4P61073 PRYP6-201ENST00000514804 343 ntBASIC14.23□□□□□ -0.13
CXCR4P61073 CNOT8-225ENST00000524105 904 ntTSL 2 BASIC14.23□□□□□ -0.13
CXCR4P61073 AF131215.3-201ENST00000532453 639 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
CXCR4P61073 GABARAP-204ENST00000571253 837 ntTSL 2 BASIC14.23□□□□□ -0.13
CXCR4P61073 FOSB-211ENST00000592436 1057 ntTSL 5 BASIC14.23□□□□□ -0.13
CXCR4P61073 SBK3-202ENST00000612221 1270 ntAPPRIS P1 TSL 5 BASIC14.23□□□□□ -0.13
CXCR4P61073 PGLYRP1-201ENST00000008938 720 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
CXCR4P61073 DPM2-201ENST00000314392 1542 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
CXCR4P61073 AP000550.1-201ENST00000420508 4833 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
CXCR4P61073 SLC17A3-202ENST00000360657 1750 ntTSL 2 BASIC14.23□□□□□ -0.13
CXCR4P61073 AC097376.2-205ENST00000610159 5334 ntBASIC14.23□□□□□ -0.13
CXCR4P61073 MAPT-213ENST00000571987 2277 ntAPPRIS P4 TSL 5 BASIC14.23□□□□□ -0.13
CXCR4P61073 TSPAN12-201ENST00000222747 2798 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
CXCR4P61073 NOP14-203ENST00000416614 3538 ntAPPRIS P3 TSL 1 (best) BASIC14.23□□□□□ -0.13
CXCR4P61073 DIS3-202ENST00000377780 5232 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
CXCR4P61073 UHRF1BP1-202ENST00000452449 4706 ntAPPRIS ALT2 TSL 5 BASIC14.23□□□□□ -0.13
CXCR4P61073 MPZL1-203ENST00000392121 3421 ntTSL 2 BASIC14.23□□□□□ -0.13
CXCR4P61073 SLC38A9-202ENST00000396865 2927 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
CXCR4P61073 ERC1-219ENST00000546231 4390 ntTSL 5 BASIC14.23□□□□□ -0.13
CXCR4P61073 RRP1B-201ENST00000340648 5090 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
CXCR4P61073 DNAJC21-202ENST00000382021 6208 ntTSL 2 BASIC14.23□□□□□ -0.13
CXCR4P61073 NFE2-201ENST00000312156 1658 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
CXCR4P61073 SAPCD2-201ENST00000409687 3848 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
CXCR4P61073 S1PR2-201ENST00000590320 3582 ntAPPRIS P1 TSL 3 BASIC14.23□□□□□ -0.13
CXCR4P61073 UGT3A2-201ENST00000282507 2355 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
CXCR4P61073 RER1-202ENST00000378512 1404 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
CXCR4P61073 GAL3ST4-202ENST00000411994 1404 ntTSL 2 BASIC14.23□□□□□ -0.13
CXCR4P61073 AC015802.1-201ENST00000588104 1449 ntBASIC14.23□□□□□ -0.13
CXCR4P61073 AC097359.2-201ENST00000604992 2389 ntBASIC14.23□□□□□ -0.13
CXCR4P61073 ZNF800-201ENST00000265827 4203 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
CXCR4P61073 LIMS1-202ENST00000338045 1876 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
CXCR4P61073 CYB561-201ENST00000360793 3001 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
CXCR4P61073 MED12L-203ENST00000422248 2757 ntAPPRIS ALT2 TSL 2 BASIC14.22□□□□□ -0.13
CXCR4P61073 TCOF1-201ENST00000323668 4832 ntAPPRIS P3 TSL 1 (best) BASIC14.22□□□□□ -0.13
CXCR4P61073 LINC00475-202ENST00000416438 2506 ntTSL 2 BASIC14.22□□□□□ -0.13
CXCR4P61073 PRNP-203ENST00000430350 2539 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
CXCR4P61073 STXBP6-201ENST00000323944 4132 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
CXCR4P61073 APBB3-201ENST00000354402 1810 ntTSL 5 BASIC14.22□□□□□ -0.13
CXCR4P61073 TMEM230-202ENST00000342308 1562 ntTSL 2 BASIC14.22□□□□□ -0.13
CXCR4P61073 DEF8-210ENST00000563594 4450 ntAPPRIS P4 TSL 1 (best) BASIC14.22□□□□□ -0.13
CXCR4P61073 SLC9A7-205ENST00000616978 10024 ntAPPRIS ALT2 TSL 1 (best) BASIC14.22□□□□□ -0.13
CXCR4P61073 SLC9A7P1-202ENST00000556476 2239 ntBASIC14.22□□□□□ -0.13
CXCR4P61073 EIF1B-AS1-206ENST00000631175 1303 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
CXCR4P61073 MINPP1-202ENST00000371996 2415 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
CXCR4P61073 SRD5A3-201ENST00000264228 4190 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
CXCR4P61073 CUL1-201ENST00000325222 3064 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
CXCR4P61073 MAP3K1-201ENST00000399503 7011 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
CXCR4P61073 CSAD-203ENST00000379846 1962 ntTSL 5 BASIC14.22□□□□□ -0.13
CXCR4P61073 CEACAM19-202ENST00000403660 1982 ntAPPRIS P3 TSL 1 (best) BASIC14.22□□□□□ -0.13
CXCR4P61073 FBRS-201ENST00000287468 2811 ntAPPRIS P1 TSL 5 BASIC14.22□□□□□ -0.13
CXCR4P61073 BRD1-205ENST00000457780 4997 ntTSL 5 BASIC14.22□□□□□ -0.13
CXCR4P61073 ACVR1B-206ENST00000542485 2362 ntTSL 2 BASIC14.22□□□□□ -0.13
CXCR4P61073 IL1RN-203ENST00000361779 1922 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
CXCR4P61073 ELK1-202ENST00000343894 736 ntAPPRIS ALT2 TSL 1 (best) BASIC14.22□□□□□ -0.13
CXCR4P61073 SDR39U1-201ENST00000399395 1233 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
CXCR4P61073 WWOX-204ENST00000408984 1227 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
CXCR4P61073 COPS7B-207ENST00000410024 1103 ntAPPRIS P1 TSL 2 BASIC14.22□□□□□ -0.13
CXCR4P61073 AL160408.2-201ENST00000436039 693 ntTSL 3 BASIC14.22□□□□□ -0.13
CXCR4P61073 PIGBOS1-201ENST00000436697 866 ntAPPRIS P2 TSL 2 BASIC14.22□□□□□ -0.13
CXCR4P61073 PHKG1P2-201ENST00000457537 863 ntBASIC14.22□□□□□ -0.13
CXCR4P61073 PPIE-208ENST00000470213 927 ntTSL 3 BASIC14.22□□□□□ -0.13
CXCR4P61073 AC093909.1-201ENST00000504731 1122 ntBASIC14.22□□□□□ -0.13
CXCR4P61073 ARSK-202ENST00000504763 1088 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
CXCR4P61073 RNA5SP415-201ENST00000517246 115 ntBASIC14.22□□□□□ -0.13
CXCR4P61073 NCAM1-AS1-202ENST00000533638 618 ntTSL 4 BASIC14.22□□□□□ -0.13
CXCR4P61073 PMF1-BGLAP-204ENST00000567140 655 ntTSL 3 BASIC14.22□□□□□ -0.13
CXCR4P61073 TMEM220-AS1-206ENST00000583343 876 ntTSL 3 BASIC14.22□□□□□ -0.13
CXCR4P61073 AQP6-205ENST00000618286 829 ntTSL 5 BASIC14.22□□□□□ -0.13
CXCR4P61073 AL031008.1-201ENST00000619963 541 ntBASIC14.22□□□□□ -0.13
CXCR4P61073 AC244517.5-205ENST00000623615 575 ntTSL 4 BASIC14.22□□□□□ -0.13
CXCR4P61073 BNIP2-201ENST00000267859 6325 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
CXCR4P61073 IDH3G-203ENST00000370093 1662 ntTSL 2 BASIC14.22□□□□□ -0.13
CXCR4P61073 SEPT9-220ENST00000588690 2919 ntTSL 5 BASIC14.22□□□□□ -0.13
CXCR4P61073 B4GALNT3-201ENST00000266383 5068 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
CXCR4P61073 AC087521.1-201ENST00000501541 2045 ntTSL 2 BASIC14.22□□□□□ -0.13
CXCR4P61073 AL365209.1-201ENST00000624418 6473 ntBASIC14.22□□□□□ -0.13
CXCR4P61073 CEP19-202ENST00000409690 2201 ntAPPRIS P2 TSL 1 (best) BASIC14.22□□□□□ -0.13
CXCR4P61073 ADAM15-206ENST00000368412 2804 ntAPPRIS ALT2 TSL 1 (best) BASIC14.22□□□□□ -0.13
CXCR4P61073 GRIN3A-201ENST00000361820 7770 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
CXCR4P61073 STRN3-201ENST00000355683 3970 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
CXCR4P61073 VIPAS39-202ENST00000343765 2761 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
CXCR4P61073 ZSCAN32-215ENST00000618425 2788 ntTSL 2 BASIC14.22□□□□□ -0.13
CXCR4P61073 AC058822.1-201ENST00000507166 2550 ntAPPRIS P1 TSL 2 BASIC14.22□□□□□ -0.13
CXCR4P61073 WFIKKN2-202ENST00000426127 2193 ntTSL 2 BASIC14.22□□□□□ -0.13
CXCR4P61073 A1CF-202ENST00000373993 1997 ntAPPRIS P4 TSL 1 (best) BASIC14.22□□□□□ -0.13
CXCR4P61073 AC011462.1-202ENST00000540732 1960 ntAPPRIS P1 TSL 2 BASIC14.22□□□□□ -0.13
CXCR4P61073 EIF1B-AS1-201ENST00000625390 1958 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
CXCR4P61073 HLF-201ENST00000226067 5547 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
CXCR4P61073 CETN1-201ENST00000327228 1758 ntAPPRIS P1 BASIC14.22□□□□□ -0.13
CXCR4P61073 IRAK1-203ENST00000369980 3666 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
CXCR4P61073 PER2-201ENST00000254657 6385 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
CXCR4P61073 NR1H3-221ENST00000481889 1704 ntTSL 5 BASIC14.21□□□□□ -0.13
CXCR4P61073 TBC1D10C-203ENST00000526387 1520 ntTSL 2 BASIC14.21□□□□□ -0.13
CXCR4P61073 CD40-207ENST00000620709 1522 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
CXCR4P61073 PLXDC1-201ENST00000315392 6252 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
CXCR4P61073 IMPACT-201ENST00000284202 3792 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
CXCR4P61073 GABRA1-201ENST00000023897 2083 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
CXCR4P61073 ZNF354B-201ENST00000322434 2802 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
CXCR4P61073 CNOT10-201ENST00000328834 2815 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
CXCR4P61073 AC015656.1-201ENST00000624209 3578 ntBASIC14.21□□□□□ -0.13
Retrieved 100 of 98,524 protein–RNA pairs in 34.5 ms