Protein–RNA interactions for Protein: P58872

RHBDL3, Rhomboid-related protein 3, humanhuman

Predictions only

Length 404 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RHBDL3P58872 FAM153A-220ENST00000513554 1437 ntAPPRIS ALT2 TSL 5 BASIC18.18■□□□□ 0.5
RHBDL3P58872 TGFB1I1-201ENST00000361773 1773 ntAPPRIS P3 TSL 1 (best) BASIC18.18■□□□□ 0.5
RHBDL3P58872 BATF-201ENST00000286639 980 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
RHBDL3P58872 KLK8-204ENST00000391806 1051 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
RHBDL3P58872 RHOG-203ENST00000396979 1289 ntAPPRIS P1 TSL 3 BASIC18.18■□□□□ 0.5
RHBDL3P58872 AC099552.1-201ENST00000431083 744 ntTSL 5 BASIC18.18■□□□□ 0.5
RHBDL3P58872 LINC01762-204ENST00000434879 436 ntTSL 2 BASIC18.18■□□□□ 0.5
RHBDL3P58872 FAM8A4P-201ENST00000435433 1213 ntBASIC18.18■□□□□ 0.5
RHBDL3P58872 MTX1P1-201ENST00000440904 838 ntBASIC18.18■□□□□ 0.5
RHBDL3P58872 AC104306.2-201ENST00000451877 341 ntBASIC18.18■□□□□ 0.5
RHBDL3P58872 CHMP2B-205ENST00000494980 1175 ntTSL 3 BASIC18.18■□□□□ 0.5
RHBDL3P58872 ANAPC13-205ENST00000511751 896 ntAPPRIS P1 TSL 3 BASIC18.18■□□□□ 0.5
RHBDL3P58872 RHOG-204ENST00000533217 886 ntAPPRIS P1 TSL 5 BASIC18.18■□□□□ 0.5
RHBDL3P58872 ZNF720-210ENST00000534369 791 ntTSL 3 BASIC18.18■□□□□ 0.5
RHBDL3P58872 AL021546.1-201ENST00000551806 552 ntAPPRIS P1 TSL 3 BASIC18.18■□□□□ 0.5
RHBDL3P58872 ACYP1-206ENST00000555694 565 ntAPPRIS P1 TSL 3 BASIC18.18■□□□□ 0.5
RHBDL3P58872 IGHV3OR16-9-202ENST00000558425 288 ntAPPRIS ALT2 BASIC18.18■□□□□ 0.5
RHBDL3P58872 AC011447.3-204ENST00000585498 883 ntTSL 2 BASIC18.18■□□□□ 0.5
RHBDL3P58872 IRF3-223ENST00000599223 1055 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
RHBDL3P58872 OCEL1-213ENST00000601529 942 ntTSL 3 BASIC18.18■□□□□ 0.5
RHBDL3P58872 AL121944.1-201ENST00000605945 686 ntTSL 2 BASIC18.18■□□□□ 0.5
RHBDL3P58872 AL008638.5-201ENST00000623814 1298 ntBASIC18.18■□□□□ 0.5
RHBDL3P58872 AL603764.1-201ENST00000636452 321 ntBASIC18.18■□□□□ 0.5
RHBDL3P58872 FMNL3-202ENST00000352151 4006 ntAPPRIS P3 TSL 2 BASIC18.18■□□□□ 0.5
RHBDL3P58872 PTPRU-202ENST00000373779 5579 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
RHBDL3P58872 CLCNKA-203ENST00000439316 1997 ntTSL 2 BASIC18.18■□□□□ 0.5
RHBDL3P58872 AL157414.3-201ENST00000624276 1954 ntBASIC18.18■□□□□ 0.5
RHBDL3P58872 PDGFA-203ENST00000402802 2305 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
RHBDL3P58872 SLC25A19-202ENST00000375261 1486 ntTSL 5 BASIC18.18■□□□□ 0.5
RHBDL3P58872 ZBTB45P1-201ENST00000452761 1456 ntBASIC18.18■□□□□ 0.5
RHBDL3P58872 MAEL-201ENST00000367870 1831 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
RHBDL3P58872 PTK7-202ENST00000230419 4272 ntAPPRIS P3 TSL 1 (best) BASIC18.18■□□□□ 0.5
RHBDL3P58872 COQ8A-202ENST00000366778 2743 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
RHBDL3P58872 FGR-202ENST00000374004 2350 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
RHBDL3P58872 RGS6-218ENST00000556437 1689 ntAPPRIS ALT1 TSL 1 (best) BASIC18.18■□□□□ 0.5
RHBDL3P58872 CAMLG-201ENST00000297156 2221 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
RHBDL3P58872 AC018735.1-201ENST00000437208 1502 ntBASIC18.18■□□□□ 0.5
RHBDL3P58872 SSH1-201ENST00000326470 2432 ntAPPRIS ALT2 TSL 2 BASIC18.18■□□□□ 0.5
RHBDL3P58872 AP001122.1-202ENST00000501648 1916 ntTSL 2 BASIC18.17■□□□□ 0.5
RHBDL3P58872 ZNF711-201ENST00000276123 2887 ntAPPRIS P3 TSL 1 (best) BASIC18.17■□□□□ 0.5
RHBDL3P58872 MAPKAP1-202ENST00000350766 3256 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
RHBDL3P58872 SUCLA2-201ENST00000378654 2192 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
RHBDL3P58872 AP5B1-201ENST00000532090 4811 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
RHBDL3P58872 AP4M1-201ENST00000359593 1817 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
RHBDL3P58872 AP4M1-206ENST00000429084 1836 ntTSL 5 BASIC18.17■□□□□ 0.5
RHBDL3P58872 RPS3-201ENST00000278572 907 ntTSL 3 BASIC18.17■□□□□ 0.5
RHBDL3P58872 FAM27C-201ENST00000377542 616 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
RHBDL3P58872 AC099552.2-201ENST00000418523 456 ntTSL 3 BASIC18.17■□□□□ 0.5
RHBDL3P58872 LINC01840-201ENST00000421870 571 ntTSL 4 BASIC18.17■□□□□ 0.5
RHBDL3P58872 RPL27A-202ENST00000524496 558 ntTSL 3 BASIC18.17■□□□□ 0.5
RHBDL3P58872 AC046168.2-201ENST00000560590 875 ntTSL 3 BASIC18.17■□□□□ 0.5
RHBDL3P58872 AC103810.3-201ENST00000583567 96 ntBASIC18.17■□□□□ 0.5
RHBDL3P58872 AC073413.1-201ENST00000603927 732 ntBASIC18.17■□□□□ 0.5
RHBDL3P58872 FDPS-221ENST00000612683 1198 ntAPPRIS ALT1 TSL 5 BASIC18.17■□□□□ 0.5
RHBDL3P58872 AC044839.1-204ENST00000634777 1058 ntTSL 5 BASIC18.17■□□□□ 0.5
RHBDL3P58872 CCDC140-201ENST00000295226 1699 ntAPPRIS P2 TSL 1 (best) BASIC18.17■□□□□ 0.5
RHBDL3P58872 SPDYE6-201ENST00000563237 1691 ntAPPRIS P1 TSL 5 BASIC18.17■□□□□ 0.5
RHBDL3P58872 NRSN2-210ENST00000621012 1852 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
RHBDL3P58872 SLC6A2-209ENST00000568943 2471 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
RHBDL3P58872 KCNB1-203ENST00000635465 4114 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
RHBDL3P58872 PLD3-201ENST00000356508 1906 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
RHBDL3P58872 PCCB-204ENST00000462637 1715 ntAPPRIS ALT2 TSL 3 BASIC18.17■□□□□ 0.5
RHBDL3P58872 AL360270.3-201ENST00000609118 1348 ntBASIC18.17■□□□□ 0.5
RHBDL3P58872 LONRF3-201ENST00000304778 2989 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
RHBDL3P58872 SHANK1-202ENST00000359082 6459 ntTSL 5 BASIC18.17■□□□□ 0.5
RHBDL3P58872 SMARCA4-215ENST00000590574 5282 ntAPPRIS ALT1 TSL 5 BASIC18.17■□□□□ 0.5
RHBDL3P58872 AC055811.4-201ENST00000624039 1754 ntBASIC18.17■□□□□ 0.5
RHBDL3P58872 CALCOCO2-211ENST00000508679 1396 ntTSL 2 BASIC18.17■□□□□ 0.5
RHBDL3P58872 ZC2HC1C-201ENST00000238686 2249 ntTSL 5 BASIC18.17■□□□□ 0.5
RHBDL3P58872 MAP4K4-204ENST00000350198 7316 ntTSL 5 BASIC18.17■□□□□ 0.5
RHBDL3P58872 ADCYAP1-203ENST00000579794 3346 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
RHBDL3P58872 ASAH1-221ENST00000636128 1608 ntTSL 5 BASIC18.16■□□□□ 0.5
RHBDL3P58872 C3orf58-201ENST00000315691 4346 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
RHBDL3P58872 NIPA2-201ENST00000337451 3233 ntAPPRIS P1 TSL 5 BASIC18.16■□□□□ 0.5
RHBDL3P58872 SYT3-202ENST00000593901 2836 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
RHBDL3P58872 TMEM127-202ENST00000432959 3099 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
RHBDL3P58872 RSPH3-201ENST00000252655 2175 ntAPPRIS P2 TSL 1 (best) BASIC18.16■□□□□ 0.5
RHBDL3P58872 SELPLG-201ENST00000228463 1704 ntAPPRIS ALT2 TSL 2 BASIC18.16■□□□□ 0.5
RHBDL3P58872 EIF3G-201ENST00000253108 1103 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
RHBDL3P58872 GHSR-202ENST00000427970 912 ntBASIC18.16■□□□□ 0.5
RHBDL3P58872 AL355994.3-201ENST00000437156 466 ntTSL 2 BASIC18.16■□□□□ 0.5
RHBDL3P58872 AL450003.2-201ENST00000450445 428 ntTSL 5 BASIC18.16■□□□□ 0.5
RHBDL3P58872 KRT8P13-201ENST00000463294 1010 ntBASIC18.16■□□□□ 0.5
RHBDL3P58872 GDNF-AS1-201ENST00000503382 604 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
RHBDL3P58872 AL391280.1-201ENST00000506969 1062 ntBASIC18.16■□□□□ 0.5
RHBDL3P58872 COX5BP1-201ENST00000507622 393 ntBASIC18.16■□□□□ 0.5
RHBDL3P58872 GTF2H2-204ENST00000517900 659 ntTSL 5 BASIC18.16■□□□□ 0.5
RHBDL3P58872 AC106820.3-201ENST00000561653 397 ntBASIC18.16■□□□□ 0.5
RHBDL3P58872 AC120498.1-201ENST00000563593 476 ntTSL 4 BASIC18.16■□□□□ 0.5
RHBDL3P58872 AC012645.3-203ENST00000567153 520 ntTSL 2 BASIC18.16■□□□□ 0.5
RHBDL3P58872 CYBA-208ENST00000567174 1085 ntTSL 2 BASIC18.16■□□□□ 0.5
RHBDL3P58872 CEACAM19-202ENST00000403660 1982 ntAPPRIS P3 TSL 1 (best) BASIC18.16■□□□□ 0.5
RHBDL3P58872 MAP4K1-208ENST00000589130 2654 ntTSL 5 BASIC18.16■□□□□ 0.5
RHBDL3P58872 PHKG1-205ENST00000452681 2226 ntTSL 2 BASIC18.16■□□□□ 0.5
RHBDL3P58872 GFRA2-204ENST00000518077 1503 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
RHBDL3P58872 NTRK1-202ENST00000368196 2701 ntAPPRIS ALT2 TSL 1 (best) BASIC18.16■□□□□ 0.5
RHBDL3P58872 SOWAHB-201ENST00000334306 3220 ntAPPRIS P1 BASIC18.16■□□□□ 0.5
RHBDL3P58872 ANKRD9-201ENST00000286918 6727 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
RHBDL3P58872 TDRD7-201ENST00000355295 3834 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
RHBDL3P58872 WNK2-202ENST00000395477 6834 ntAPPRIS ALT2 TSL 5 BASIC18.16■□□□□ 0.5
Retrieved 100 of 98,524 protein–RNA pairs in 46.6 ms