Protein–RNA interactions for Protein: P55287

CDH11, Cadherin-11, humanhuman

Predictions only

Length 796 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH11P55287 CKMT1B-215ENST00000627381 1074 ntTSL 5 BASIC14.35□□□□□ -0.11
CDH11P55287 AC092811.2-201ENST00000632561 559 ntTSL 4 BASIC14.35□□□□□ -0.11
CDH11P55287 ATXN2L-202ENST00000336783 4367 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
CDH11P55287 SEPT7-201ENST00000350320 4350 ntAPPRIS P5 TSL 5 BASIC14.35□□□□□ -0.11
CDH11P55287 MCHR2-201ENST00000281806 2368 ntAPPRIS P1 TSL 2 BASIC14.35□□□□□ -0.11
CDH11P55287 AEN-201ENST00000332810 3117 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
CDH11P55287 BORCS8-203ENST00000477565 1489 ntAPPRIS ALT1 TSL 1 (best) BASIC14.35□□□□□ -0.11
CDH11P55287 PYCR2-201ENST00000343818 1689 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
CDH11P55287 AC023908.3-201ENST00000564211 3047 ntBASIC14.35□□□□□ -0.11
CDH11P55287 CORO1A-208ENST00000565497 1348 ntTSL 5 BASIC14.35□□□□□ -0.11
CDH11P55287 AC126365.1-201ENST00000578585 1514 ntBASIC14.35□□□□□ -0.11
CDH11P55287 CELF4-223ENST00000603232 1906 ntAPPRIS ALT1 TSL 1 (best) BASIC14.35□□□□□ -0.11
CDH11P55287 DCAKD-201ENST00000310604 2122 ntAPPRIS P1 TSL 5 BASIC14.35□□□□□ -0.11
CDH11P55287 MAGEA8-204ENST00000535454 2112 ntAPPRIS P1 TSL 3 BASIC14.35□□□□□ -0.11
CDH11P55287 RLF-201ENST00000372771 6246 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
CDH11P55287 DEF8-210ENST00000563594 4450 ntAPPRIS P4 TSL 1 (best) BASIC14.35□□□□□ -0.11
CDH11P55287 WDR74-206ENST00000529106 1366 ntAPPRIS P1 TSL 2 BASIC14.34□□□□□ -0.11
CDH11P55287 CD300LG-204ENST00000539718 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
CDH11P55287 KCP-203ENST00000610776 5108 ntTSL 5 BASIC14.34□□□□□ -0.11
CDH11P55287 GPI-205ENST00000586425 1799 ntTSL 5 BASIC14.34□□□□□ -0.11
CDH11P55287 KIAA0895-207ENST00000436884 1952 ntTSL 2 BASIC14.34□□□□□ -0.11
CDH11P55287 CREB3L2-204ENST00000456390 2360 ntTSL 2 BASIC14.34□□□□□ -0.11
CDH11P55287 SLC34A1-201ENST00000324417 2573 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
CDH11P55287 KIAA1468-202ENST00000398130 6178 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
CDH11P55287 COG8-206ENST00000306875 4247 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
CDH11P55287 LENG8-209ENST00000616932 2825 ntAPPRIS ALT2 TSL 5 BASIC14.34□□□□□ -0.11
CDH11P55287 CCDC40-202ENST00000374876 2010 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
CDH11P55287 SIRT6-202ENST00000337491 1641 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
CDH11P55287 AMHR2-202ENST00000379791 1437 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
CDH11P55287 AL390038.1-201ENST00000419814 2481 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
CDH11P55287 AL359258.1-201ENST00000438965 2481 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
CDH11P55287 AC018892.3-201ENST00000623986 2499 ntBASIC14.34□□□□□ -0.11
CDH11P55287 ADCY7-203ENST00000537579 2090 ntTSL 5 BASIC14.34□□□□□ -0.11
CDH11P55287 LINC01660-203ENST00000618517 1859 ntTSL 2 BASIC14.34□□□□□ -0.11
CDH11P55287 SHISA5-219ENST00000612611 1677 ntTSL 5 BASIC14.34□□□□□ -0.11
CDH11P55287 BCAR1-204ENST00000418647 3387 ntAPPRIS ALT2 TSL 2 BASIC14.34□□□□□ -0.11
CDH11P55287 FAM210A-202ENST00000402563 4240 ntAPPRIS P1 TSL 3 BASIC14.34□□□□□ -0.11
CDH11P55287 RASAL2-AS1-202ENST00000421505 2329 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
CDH11P55287 POLR3GL-202ENST00000369314 1165 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
CDH11P55287 METTL21A-202ENST00000406927 1103 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
CDH11P55287 CRIP1-203ENST00000409393 677 ntAPPRIS P1 TSL 3 BASIC14.34□□□□□ -0.11
CDH11P55287 DBH-AS1-201ENST00000425189 2139 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
CDH11P55287 IQSEC2-204ENST00000485377 835 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
CDH11P55287 DCUN1D5-209ENST00000531543 1030 ntTSL 5 BASIC14.34□□□□□ -0.11
CDH11P55287 AC138304.1-201ENST00000563841 424 ntTSL 3 BASIC14.34□□□□□ -0.11
CDH11P55287 INTS4P1-202ENST00000587624 2985 ntTSL 5 BASIC14.34□□□□□ -0.11
CDH11P55287 SBK3-202ENST00000612221 1270 ntAPPRIS P1 TSL 5 BASIC14.34□□□□□ -0.11
CDH11P55287 NEK5-204ENST00000617045 2127 ntAPPRIS P1 TSL 2 BASIC14.34□□□□□ -0.11
CDH11P55287 GOLGA2-215ENST00000639983 1038 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
CDH11P55287 YTHDC1-202ENST00000355665 3244 ntAPPRIS P3 TSL 1 (best) BASIC14.34□□□□□ -0.11
CDH11P55287 MAP7D1-203ENST00000373150 3238 ntAPPRIS ALT2 TSL 2 BASIC14.34□□□□□ -0.11
CDH11P55287 ATP6V0D1-201ENST00000290949 1716 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
CDH11P55287 ODF2-202ENST00000372791 2375 ntAPPRIS P3 TSL 1 (best) BASIC14.34□□□□□ -0.11
CDH11P55287 NRCAM-217ENST00000613830 3025 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
CDH11P55287 RASGRF2-206ENST00000638442 2842 ntTSL 5 BASIC14.34□□□□□ -0.11
CDH11P55287 OSR2-209ENST00000522510 1528 ntAPPRIS P1 TSL 2 BASIC14.34□□□□□ -0.11
CDH11P55287 PTHLH-209ENST00000545234 1544 ntAPPRIS ALT1 TSL 5 BASIC14.34□□□□□ -0.11
CDH11P55287 FOXRED1-201ENST00000263578 1970 ntAPPRIS P2 TSL 1 (best) BASIC14.34□□□□□ -0.11
CDH11P55287 DUOXA1-202ENST00000430224 1317 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
CDH11P55287 ERICH5-201ENST00000318528 1761 ntAPPRIS P3 TSL 1 (best) BASIC14.34□□□□□ -0.11
CDH11P55287 EXOC6B-202ENST00000410104 5795 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
CDH11P55287 NCOR2-203ENST00000404621 8520 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
CDH11P55287 RUNDC1-201ENST00000361677 3828 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
CDH11P55287 HPSE-206ENST00000512196 1571 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
CDH11P55287 PAX6-276ENST00000640684 1557 ntTSL 5 BASIC14.34□□□□□ -0.11
CDH11P55287 NIPA1-201ENST00000337435 6567 ntAPPRIS P4 TSL 1 (best) BASIC14.34□□□□□ -0.11
CDH11P55287 AC013726.1-201ENST00000563747 2285 ntBASIC14.34□□□□□ -0.11
CDH11P55287 AC127383.1-201ENST00000444697 1800 ntBASIC14.34□□□□□ -0.11
CDH11P55287 NUP62-212ENST00000597723 1824 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
CDH11P55287 ZEB1-AS1-208ENST00000607166 2503 ntBASIC14.34□□□□□ -0.11
CDH11P55287 ALMS1P1-202ENST00000450720 1601 ntTSL 1 (best) BASIC14.33□□□□□ -0.11
CDH11P55287 IRF2BP2-201ENST00000366609 4663 ntAPPRIS P3 TSL 1 (best) BASIC14.33□□□□□ -0.11
CDH11P55287 TMEM41B-204ENST00000528080 3968 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
CDH11P55287 SLC2A9-202ENST00000309065 1866 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.11
CDH11P55287 NPHP4-201ENST00000378156 4994 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
CDH11P55287 NUMBL-201ENST00000252891 3561 ntAPPRIS P3 TSL 1 (best) BASIC14.33□□□□□ -0.11
CDH11P55287 SAPCD2-201ENST00000409687 3848 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
CDH11P55287 SNX18-202ENST00000343017 3140 ntBASIC14.33□□□□□ -0.11
CDH11P55287 CLEC18A-201ENST00000288040 2155 ntAPPRIS P2 TSL 1 (best) BASIC14.33□□□□□ -0.11
CDH11P55287 GUCD1-206ENST00000435822 3613 ntAPPRIS ALT1 TSL 1 (best) BASIC14.33□□□□□ -0.11
CDH11P55287 GPR137C-201ENST00000321662 3888 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
CDH11P55287 PTBP1-204ENST00000394601 3185 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
CDH11P55287 PCCB-204ENST00000462637 1715 ntAPPRIS ALT2 TSL 3 BASIC14.33□□□□□ -0.12
CDH11P55287 TONSL-203ENST00000613741 1713 ntTSL 5 BASIC14.33□□□□□ -0.12
CDH11P55287 TMEM189-203ENST00000371656 1973 ntTSL 2 BASIC14.33□□□□□ -0.12
CDH11P55287 JPH4-201ENST00000356300 4278 ntAPPRIS P2 TSL 1 (best) BASIC14.33□□□□□ -0.12
CDH11P55287 C21orf33-202ENST00000348499 1506 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
CDH11P55287 MRPS22-212ENST00000495075 1547 ntAPPRIS P2 TSL 1 (best) BASIC14.33□□□□□ -0.12
CDH11P55287 LIM2-201ENST00000221973 983 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
CDH11P55287 CLEC1B-201ENST00000298527 952 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
CDH11P55287 C16orf92-201ENST00000300575 895 ntAPPRIS P2 TSL 1 (best) BASIC14.33□□□□□ -0.12
CDH11P55287 PENK-201ENST00000314922 1199 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
CDH11P55287 SIVA1-202ENST00000347067 550 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
CDH11P55287 PTMS-202ENST00000389462 773 ntTSL 2 BASIC14.33□□□□□ -0.12
CDH11P55287 TMEM191A-202ENST00000419950 663 ntTSL 3 BASIC14.33□□□□□ -0.12
CDH11P55287 AC021188.1-201ENST00000421534 740 ntTSL 3 BASIC14.33□□□□□ -0.12
CDH11P55287 AC062015.1-201ENST00000423838 1134 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
CDH11P55287 AC108047.1-201ENST00000457407 404 ntTSL 2 BASIC14.33□□□□□ -0.12
CDH11P55287 FAM72B-205ENST00000471903 676 ntTSL 5 BASIC14.33□□□□□ -0.12
CDH11P55287 AC125807.1-201ENST00000483097 614 ntBASIC14.33□□□□□ -0.12
Retrieved 100 of 98,524 protein–RNA pairs in 61.7 ms