Protein–RNA interactions for Protein: P54852

EMP3, Epithelial membrane protein 3, humanhuman

Predictions only

Length 163 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EMP3P54852 CLN3-229ENST00000567963 1452 ntTSL 5 BASIC15.33■□□□□ 0.04
EMP3P54852 PPP3CA-201ENST00000323055 4519 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
EMP3P54852 CCHCR1-208ENST00000451521 2587 ntAPPRIS ALT2 TSL 1 (best) BASIC15.32■□□□□ 0.04
EMP3P54852 GLIDR-202ENST00000625350 2588 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
EMP3P54852 TBL2-205ENST00000432538 1573 ntTSL 2 BASIC15.32■□□□□ 0.04
EMP3P54852 LCK-206ENST00000373564 2137 ntTSL 5 BASIC15.32■□□□□ 0.04
EMP3P54852 TRIM17-203ENST00000366697 2652 ntAPPRIS P1 TSL 2 BASIC15.32■□□□□ 0.04
EMP3P54852 HSD17B4-206ENST00000504811 2740 ntTSL 2 BASIC15.32■□□□□ 0.04
EMP3P54852 NXF1-213ENST00000532297 2795 ntAPPRIS P1 TSL 5 BASIC15.32■□□□□ 0.04
EMP3P54852 RGR-202ENST00000359452 2247 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
EMP3P54852 CLEC18A-209ENST00000615430 2215 ntAPPRIS P2 TSL 5 BASIC15.32■□□□□ 0.04
EMP3P54852 CLEC18C-211ENST00000618957 2215 ntAPPRIS P2 TSL 5 BASIC15.32■□□□□ 0.04
EMP3P54852 CLEC18B-205ENST00000619275 2215 ntAPPRIS ALT2 TSL 5 BASIC15.32■□□□□ 0.04
EMP3P54852 LRFN1-201ENST00000248668 3381 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
EMP3P54852 AC005252.3-201ENST00000623855 2258 ntBASIC15.32■□□□□ 0.04
EMP3P54852 KNSTRN-201ENST00000249776 1714 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
EMP3P54852 CXCL14-202ENST00000512158 1760 ntAPPRIS ALT2 TSL 1 (best) BASIC15.32■□□□□ 0.04
EMP3P54852 ZSCAN18-208ENST00000595944 1768 ntTSL 2 BASIC15.32■□□□□ 0.04
EMP3P54852 RAB11FIP5-205ENST00000486777 6120 ntTSL 5 BASIC15.32■□□□□ 0.04
EMP3P54852 SP100-204ENST00000409341 1898 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
EMP3P54852 CLEC18A-203ENST00000449317 1875 ntAPPRIS ALT2 TSL 5 BASIC15.32■□□□□ 0.04
EMP3P54852 DIRC1-201ENST00000308100 1037 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
EMP3P54852 CHIA-203ENST00000353665 1214 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
EMP3P54852 C1orf43-203ENST00000368516 872 ntTSL 2 BASIC15.32■□□□□ 0.04
EMP3P54852 ZUFSP-201ENST00000368573 1225 ntTSL 5 BASIC15.32■□□□□ 0.04
EMP3P54852 DBNDD2-205ENST00000372717 1207 ntTSL 5 BASIC15.32■□□□□ 0.04
EMP3P54852 RNF186-201ENST00000375121 1250 ntAPPRIS P1 BASIC15.32■□□□□ 0.04
EMP3P54852 CENPM-205ENST00000404067 905 ntTSL 3 BASIC15.32■□□□□ 0.04
EMP3P54852 FO393414.2-201ENST00000405153 598 ntBASIC15.32■□□□□ 0.04
EMP3P54852 LINC01273-201ENST00000411453 685 ntTSL 2 BASIC15.32■□□□□ 0.04
EMP3P54852 RPL37AP1-201ENST00000412502 279 ntBASIC15.32■□□□□ 0.04
EMP3P54852 AL080243.2-201ENST00000418783 582 ntBASIC15.32■□□□□ 0.04
EMP3P54852 AL591848.2-201ENST00000442712 522 ntTSL 3 BASIC15.32■□□□□ 0.04
EMP3P54852 AL135787.1-201ENST00000450154 302 ntTSL 3 BASIC15.32■□□□□ 0.04
EMP3P54852 AC093214.1-201ENST00000511688 1107 ntBASIC15.32■□□□□ 0.04
EMP3P54852 MTUS1-215ENST00000519066 567 ntTSL 4 BASIC15.32■□□□□ 0.04
EMP3P54852 IGHV3-42-201ENST00000520410 361 ntBASIC15.32■□□□□ 0.04
EMP3P54852 AC025437.4-201ENST00000522975 681 ntTSL 3 BASIC15.32■□□□□ 0.04
EMP3P54852 AP003041.2-201ENST00000525666 1180 ntBASIC15.32■□□□□ 0.04
EMP3P54852 RAB1B-202ENST00000527397 991 ntTSL 3 BASIC15.32■□□□□ 0.04
EMP3P54852 DRAM1-202ENST00000544152 1048 ntTSL 2 BASIC15.32■□□□□ 0.04
EMP3P54852 LMO7-AS1-202ENST00000568735 467 ntTSL 3 BASIC15.32■□□□□ 0.04
EMP3P54852 AC067852.1-201ENST00000585572 594 ntTSL 4 BASIC15.32■□□□□ 0.04
EMP3P54852 AF230666.2-201ENST00000602328 725 ntBASIC15.32■□□□□ 0.04
EMP3P54852 TEX28P1-201ENST00000613479 1221 ntBASIC15.32■□□□□ 0.04
EMP3P54852 TEX28P2-201ENST00000617764 1221 ntBASIC15.32■□□□□ 0.04
EMP3P54852 AC120349.3-201ENST00000624377 529 ntBASIC15.32■□□□□ 0.04
EMP3P54852 CLN3-246ENST00000636228 1224 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
EMP3P54852 OR6C71P-202ENST00000641886 1107 ntBASIC15.32■□□□□ 0.04
EMP3P54852 ANKMY2-201ENST00000306999 2555 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
EMP3P54852 TMEM140-201ENST00000275767 1997 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
EMP3P54852 GFOD2-203ENST00000602377 1991 ntTSL 4 BASIC15.32■□□□□ 0.04
EMP3P54852 AATK-201ENST00000326724 5257 ntAPPRIS P3 TSL 5 BASIC15.32■□□□□ 0.04
EMP3P54852 GLYCTK-207ENST00000477382 1304 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
EMP3P54852 AC007920.1-201ENST00000356133 2674 ntTSL 2 BASIC15.32■□□□□ 0.04
EMP3P54852 TBC1D17-202ENST00000535102 2025 ntTSL 2 BASIC15.32■□□□□ 0.04
EMP3P54852 USP13-201ENST00000263966 8323 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
EMP3P54852 CROCCP1-201ENST00000426910 5675 ntBASIC15.32■□□□□ 0.04
EMP3P54852 DTD2-202ENST00000356180 1400 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
EMP3P54852 AL691432.1-201ENST00000596308 1422 ntBASIC15.32■□□□□ 0.04
EMP3P54852 CYB561D1-205ENST00000430195 5077 ntTSL 2 BASIC15.32■□□□□ 0.04
EMP3P54852 ACOX3-203ENST00000503233 2253 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
EMP3P54852 TMEM222-210ENST00000608611 1511 ntAPPRIS ALT1 TSL 1 (best) BASIC15.32■□□□□ 0.04
EMP3P54852 CLCNKB-204ENST00000619181 1544 ntTSL 5 BASIC15.32■□□□□ 0.04
EMP3P54852 TJP3-207ENST00000589378 3068 ntAPPRIS ALT2 TSL 2 BASIC15.32■□□□□ 0.04
EMP3P54852 OASL-204ENST00000620239 1695 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
EMP3P54852 SCRIB-202ENST00000356994 5218 ntAPPRIS P4 TSL 2 BASIC15.31■□□□□ 0.04
EMP3P54852 PPP1R26P4-201ENST00000619065 3527 ntBASIC15.31■□□□□ 0.04
EMP3P54852 TUBG2-201ENST00000251412 1761 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
EMP3P54852 NEIL2-201ENST00000284503 2671 ntAPPRIS P1 TSL 2 BASIC15.31■□□□□ 0.04
EMP3P54852 MSH5-203ENST00000375750 2775 ntAPPRIS P3 TSL 1 (best) BASIC15.31■□□□□ 0.04
EMP3P54852 GPANK1-205ENST00000375906 2793 ntAPPRIS P1 TSL 2 BASIC15.31■□□□□ 0.04
EMP3P54852 MOCS1-205ENST00000373195 2852 ntTSL 2 BASIC15.31■□□□□ 0.04
EMP3P54852 GRM7-203ENST00000389336 2901 ntAPPRIS ALT1 TSL 1 (best) BASIC15.31■□□□□ 0.04
EMP3P54852 PRSS50-201ENST00000460241 2960 ntAPPRIS P1 TSL 2 BASIC15.31■□□□□ 0.04
EMP3P54852 SLC25A48-203ENST00000425402 2062 ntTSL 5 BASIC15.31■□□□□ 0.04
EMP3P54852 PPP1R37-201ENST00000221462 3163 ntAPPRIS P1 TSL 5 BASIC15.31■□□□□ 0.04
EMP3P54852 DNAJC14-201ENST00000317269 3330 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
EMP3P54852 TSC22D3-201ENST00000315660 2213 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
EMP3P54852 VWA1-203ENST00000476993 4511 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
EMP3P54852 ZNF557-201ENST00000252840 2268 ntAPPRIS P3 TSL 1 (best) BASIC15.31■□□□□ 0.04
EMP3P54852 AC006449.6-201ENST00000612330 2296 ntBASIC15.31■□□□□ 0.04
EMP3P54852 ROBO3-201ENST00000397801 4569 ntAPPRIS P2 TSL 1 (best) BASIC15.31■□□□□ 0.04
EMP3P54852 ROBO3-220ENST00000538940 4551 ntAPPRIS ALT2 TSL 5 BASIC15.31■□□□□ 0.04
EMP3P54852 LRRC3-201ENST00000291592 5869 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
EMP3P54852 PATZ1-204ENST00000405309 3711 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
EMP3P54852 FLYWCH1-203ENST00000416288 4963 ntAPPRIS P3 TSL 1 (best) BASIC15.31■□□□□ 0.04
EMP3P54852 WARS-232ENST00000556645 2508 ntTSL 5 BASIC15.31■□□□□ 0.04
EMP3P54852 MCEE-201ENST00000244217 835 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
EMP3P54852 CLEC1B-201ENST00000298527 952 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
EMP3P54852 LRRC28-202ENST00000331450 752 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
EMP3P54852 MIR648-201ENST00000385046 94 ntBASIC15.31■□□□□ 0.04
EMP3P54852 AL365255.1-202ENST00000413887 363 ntTSL 5 BASIC15.31■□□□□ 0.04
EMP3P54852 ZDHHC20-IT1-201ENST00000417513 440 ntTSL 3 BASIC15.31■□□□□ 0.04
EMP3P54852 TSSK5P-201ENST00000423978 907 ntBASIC15.31■□□□□ 0.04
EMP3P54852 AC015971.1-204ENST00000424788 1147 ntTSL 5 BASIC15.31■□□□□ 0.04
EMP3P54852 AL589923.1-201ENST00000441473 316 ntTSL 5 BASIC15.31■□□□□ 0.04
EMP3P54852 PIGZ-204ENST00000443835 675 ntTSL 4 BASIC15.31■□□□□ 0.04
EMP3P54852 EEF1DP4-201ENST00000446006 880 ntBASIC15.31■□□□□ 0.04
EMP3P54852 TMEM176B-205ENST00000450753 1006 ntTSL 2 BASIC15.31■□□□□ 0.04
Retrieved 100 of 98,524 protein–RNA pairs in 30.5 ms