Protein–RNA interactions for Protein: P54709

ATP1B3, Sodium/potassium-transporting ATPase subunit beta-3, humanhuman

Predictions only

Length 279 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATP1B3P54709 KCNMA1-262ENST00000639489 4302 ntAPPRIS ALT2 TSL 5 BASIC13.59□□□□□ -0.23
ATP1B3P54709 PXDNL-201ENST00000356297 4805 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
ATP1B3P54709 SNAP47-AS1-201ENST00000413347 1708 ntTSL 2 BASIC13.59□□□□□ -0.23
ATP1B3P54709 IL11RA-202ENST00000441545 1700 ntAPPRIS P1 TSL 5 BASIC13.59□□□□□ -0.23
ATP1B3P54709 ETV5-206ENST00000434744 2213 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
ATP1B3P54709 MTFMT-201ENST00000220058 2734 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
ATP1B3P54709 NUMBL-201ENST00000252891 3561 ntAPPRIS P3 TSL 1 (best) BASIC13.59□□□□□ -0.23
ATP1B3P54709 UNC13A-202ENST00000519716 9838 ntAPPRIS P2 TSL 5 BASIC13.59□□□□□ -0.23
ATP1B3P54709 AL928654.2-201ENST00000551271 2279 ntTSL 3 BASIC13.59□□□□□ -0.23
ATP1B3P54709 FBXL19-204ENST00000471231 3641 ntTSL 2 BASIC13.59□□□□□ -0.23
ATP1B3P54709 GLIS2-201ENST00000262366 4469 ntAPPRIS P1 TSL 2 BASIC13.59□□□□□ -0.23
ATP1B3P54709 EIF4A1-201ENST00000293831 1756 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
ATP1B3P54709 TMEM41B-204ENST00000528080 3968 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
ATP1B3P54709 AC007686.3-201ENST00000619017 3487 ntBASIC13.59□□□□□ -0.23
ATP1B3P54709 KLHL7-201ENST00000322275 969 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
ATP1B3P54709 DDT-201ENST00000350608 671 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
ATP1B3P54709 MIR574-201ENST00000385209 96 ntBASIC13.59□□□□□ -0.23
ATP1B3P54709 GUK1-210ENST00000391865 990 ntAPPRIS ALT1 TSL 1 (best) BASIC13.59□□□□□ -0.23
ATP1B3P54709 NME2-201ENST00000393183 568 ntTSL 2 BASIC13.59□□□□□ -0.23
ATP1B3P54709 AL645939.2-201ENST00000427340 991 ntBASIC13.59□□□□□ -0.23
ATP1B3P54709 SNHG11-207ENST00000434729 1058 ntTSL 4 BASIC13.59□□□□□ -0.23
ATP1B3P54709 KIAA0930-215ENST00000496226 589 ntTSL 5 BASIC13.59□□□□□ -0.23
ATP1B3P54709 SEC24B-AS1-201ENST00000499359 957 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
ATP1B3P54709 SEC24B-AS1-204ENST00000510971 554 ntTSL 4 BASIC13.59□□□□□ -0.23
ATP1B3P54709 POLD2P1-201ENST00000511220 997 ntBASIC13.59□□□□□ -0.23
ATP1B3P54709 AC018653.3-201ENST00000544657 749 ntTSL 3 BASIC13.59□□□□□ -0.23
ATP1B3P54709 RARRES2P9-201ENST00000565168 469 ntBASIC13.59□□□□□ -0.23
ATP1B3P54709 AC084121.4-201ENST00000641598 221 ntBASIC13.59□□□□□ -0.23
ATP1B3P54709 AF228730.8-201ENST00000642140 221 ntBASIC13.59□□□□□ -0.23
ATP1B3P54709 TMEM86B-201ENST00000327042 1637 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
ATP1B3P54709 CAPN5-202ENST00000456580 2805 ntTSL 2 BASIC13.59□□□□□ -0.23
ATP1B3P54709 GNAO1-202ENST00000262494 5767 ntAPPRIS ALT1 TSL 1 (best) BASIC13.59□□□□□ -0.23
ATP1B3P54709 CD1E-212ENST00000368167 1458 ntAPPRIS P4 TSL 1 (best) BASIC13.59□□□□□ -0.23
ATP1B3P54709 CD300A-205ENST00000577511 1459 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
ATP1B3P54709 CNN1-210ENST00000592923 1848 ntTSL 2 BASIC13.59□□□□□ -0.23
ATP1B3P54709 AC005885.1-204ENST00000637885 2885 ntAPPRIS P1 TSL 5 BASIC13.59□□□□□ -0.23
ATP1B3P54709 PHAX-201ENST00000297540 4288 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
ATP1B3P54709 CYP4X1-201ENST00000371901 2357 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
ATP1B3P54709 MAP3K12-201ENST00000267079 4319 ntAPPRIS P3 TSL 1 (best) BASIC13.59□□□□□ -0.23
ATP1B3P54709 AKT1S1-205ENST00000391833 3640 ntAPPRIS P1 TSL 2 BASIC13.59□□□□□ -0.23
ATP1B3P54709 FAM186B-201ENST00000257894 2944 ntAPPRIS P2 TSL 1 (best) BASIC13.59□□□□□ -0.23
ATP1B3P54709 TBRG4-201ENST00000258770 2243 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
ATP1B3P54709 SEPT7-201ENST00000350320 4350 ntAPPRIS P5 TSL 5 BASIC13.59□□□□□ -0.23
ATP1B3P54709 STEAP3-202ENST00000393107 1871 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
ATP1B3P54709 ATP6AP2-226ENST00000637526 1862 ntAPPRIS ALT2 TSL 5 BASIC13.59□□□□□ -0.23
ATP1B3P54709 TPGS2-201ENST00000334295 4030 ntAPPRIS P3 TSL 1 (best) BASIC13.59□□□□□ -0.23
ATP1B3P54709 C21orf33-202ENST00000348499 1506 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
ATP1B3P54709 ABCA1-203ENST00000423487 1540 ntTSL 2 BASIC13.59□□□□□ -0.23
ATP1B3P54709 GATB-209ENST00000512306 1519 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
ATP1B3P54709 MTMR6-201ENST00000381801 5659 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
ATP1B3P54709 CHN2-201ENST00000222792 3530 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
ATP1B3P54709 AC112484.1-201ENST00000508239 2291 ntAPPRIS P5 TSL 2 BASIC13.59□□□□□ -0.23
ATP1B3P54709 USP19-205ENST00000398898 4474 ntAPPRIS ALT2 TSL 5 BASIC13.58□□□□□ -0.23
ATP1B3P54709 FAM46C-201ENST00000369448 5751 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.23
ATP1B3P54709 LLGL2-209ENST00000578363 1393 ntTSL 1 (best) BASIC13.58□□□□□ -0.23
ATP1B3P54709 KHNYN-201ENST00000251343 6725 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.23
ATP1B3P54709 SLC22A15-202ENST00000369503 4720 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.23
ATP1B3P54709 UBR2-201ENST00000372899 7857 ntAPPRIS P2 TSL 1 (best) BASIC13.58□□□□□ -0.23
ATP1B3P54709 UBR2-202ENST00000372901 7857 ntAPPRIS ALT1 TSL 5 BASIC13.58□□□□□ -0.23
ATP1B3P54709 CERCAM-213ENST00000612334 1554 ntAPPRIS ALT2 TSL 5 BASIC13.58□□□□□ -0.23
ATP1B3P54709 UCKL1-AS1-201ENST00000623569 3602 ntBASIC13.58□□□□□ -0.23
ATP1B3P54709 KCP-203ENST00000610776 5108 ntTSL 5 BASIC13.58□□□□□ -0.23
ATP1B3P54709 POLR2J4-203ENST00000326391 1422 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
ATP1B3P54709 CLDN22-201ENST00000323319 2581 ntAPPRIS P1 BASIC13.58□□□□□ -0.24
ATP1B3P54709 ZNF74-209ENST00000611540 3714 ntAPPRIS P2 TSL 2 BASIC13.58□□□□□ -0.24
ATP1B3P54709 AC127383.1-201ENST00000444697 1800 ntBASIC13.58□□□□□ -0.24
ATP1B3P54709 MLPH-203ENST00000409373 2031 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
ATP1B3P54709 ZC2HC1C-201ENST00000238686 2249 ntTSL 5 BASIC13.58□□□□□ -0.24
ATP1B3P54709 ZFPM2-206ENST00000520492 3960 ntTSL 2 BASIC13.58□□□□□ -0.24
ATP1B3P54709 SRD5A3-201ENST00000264228 4190 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
ATP1B3P54709 PACSIN2-201ENST00000263246 3249 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
ATP1B3P54709 NKX2-6-201ENST00000325017 906 ntAPPRIS P1 TSL 2 BASIC13.58□□□□□ -0.24
ATP1B3P54709 CD82-202ENST00000342935 967 ntTSL 5 BASIC13.58□□□□□ -0.24
ATP1B3P54709 Metazoa_SRP.28-201ENST00000366402 260 ntBASIC13.58□□□□□ -0.24
ATP1B3P54709 PNRC2-202ENST00000374468 814 ntAPPRIS P1 TSL 2 BASIC13.58□□□□□ -0.24
ATP1B3P54709 SELENOM-202ENST00000402395 1054 ntAPPRIS P2 TSL 1 (best) BASIC13.58□□□□□ -0.24
ATP1B3P54709 AC005237.2-201ENST00000434368 219 ntBASIC13.58□□□□□ -0.24
ATP1B3P54709 CEND1P1-201ENST00000451006 455 ntBASIC13.58□□□□□ -0.24
ATP1B3P54709 PAEP-208ENST00000479141 990 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
ATP1B3P54709 AHSA2-208ENST00000489653 1197 ntAPPRIS P1 TSL 5 BASIC13.58□□□□□ -0.24
ATP1B3P54709 AC069335.1-201ENST00000489972 472 ntBASIC13.58□□□□□ -0.24
ATP1B3P54709 FAM153C-206ENST00000507848 1071 ntAPPRIS ALT2 TSL 2 BASIC13.58□□□□□ -0.24
ATP1B3P54709 FAM86HP-203ENST00000511564 521 ntTSL 2 BASIC13.58□□□□□ -0.24
ATP1B3P54709 PGAM5P1-201ENST00000518923 814 ntBASIC13.58□□□□□ -0.24
ATP1B3P54709 CPSF1-207ENST00000531727 704 ntTSL 3 BASIC13.58□□□□□ -0.24
ATP1B3P54709 TSFM-210ENST00000550559 897 ntTSL 5 BASIC13.58□□□□□ -0.24
ATP1B3P54709 COQ9-214ENST00000567933 882 ntTSL 3 BASIC13.58□□□□□ -0.24
ATP1B3P54709 SNHG15-206ENST00000580528 1073 ntTSL 2 BASIC13.58□□□□□ -0.24
ATP1B3P54709 ARHGDIA-208ENST00000581876 709 ntTSL 3 BASIC13.58□□□□□ -0.24
ATP1B3P54709 TNNT1-211ENST00000588426 683 ntTSL 5 BASIC13.58□□□□□ -0.24
ATP1B3P54709 AC098484.3-202ENST00000603943 1011 ntAPPRIS P5 TSL 5 BASIC13.58□□□□□ -0.24
ATP1B3P54709 ARMCX4-202ENST00000423738 7424 ntAPPRIS P1 TSL 5 BASIC13.58□□□□□ -0.24
ATP1B3P54709 PLPP3-201ENST00000371250 3292 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
ATP1B3P54709 CSRNP2-201ENST00000228515 4471 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
ATP1B3P54709 KCTD3-201ENST00000259154 3931 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
ATP1B3P54709 PPP1R16A-201ENST00000292539 2722 ntAPPRIS P1 TSL 2 BASIC13.58□□□□□ -0.24
ATP1B3P54709 TSNARE1-201ENST00000307180 1907 ntAPPRIS ALT2 TSL 5 BASIC13.58□□□□□ -0.24
ATP1B3P54709 SELENOV-201ENST00000335426 1704 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
ATP1B3P54709 SELENOV-205ENST00000622070 1704 ntTSL 5 BASIC13.58□□□□□ -0.24
ATP1B3P54709 TBC1D24-205ENST00000567020 6673 ntAPPRIS P3 TSL 1 (best) BASIC13.58□□□□□ -0.24
Retrieved 100 of 98,524 protein–RNA pairs in 32.4 ms