Protein–RNA interactions for Protein: P35527

KRT9, Keratin, type I cytoskeletal 9, humanhuman

Predictions only

Length 623 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRT9P35527 LYSMD4-204ENST00000409796 2672 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
KRT9P35527 SLC26A11-203ENST00000546047 2807 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
KRT9P35527 DIP2A-201ENST00000400274 7023 ntAPPRIS ALT2 TSL 5 BASIC17.1■□□□□ 0.33
KRT9P35527 PIGT-246ENST00000639499 2021 ntTSL 5 BASIC17.09■□□□□ 0.33
KRT9P35527 CNTNAP3-202ENST00000358144 4885 ntTSL 5 BASIC17.09■□□□□ 0.33
KRT9P35527 PITPNM2-202ENST00000320201 6736 ntAPPRIS P3 TSL 5 BASIC17.09■□□□□ 0.33
KRT9P35527 DUOX1-201ENST00000321429 5738 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
KRT9P35527 PSMG3-AS1-201ENST00000437621 5701 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
KRT9P35527 CASC3-201ENST00000264645 4116 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
KRT9P35527 RPH3AL-201ENST00000323434 2809 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
KRT9P35527 MRPL55-208ENST00000366734 990 ntAPPRIS P1 TSL 2 BASIC17.09■□□□□ 0.33
KRT9P35527 MRPL55-217ENST00000366746 565 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
KRT9P35527 PARK7-203ENST00000377491 977 ntAPPRIS P1 TSL 3 BASIC17.09■□□□□ 0.33
KRT9P35527 MRPS12-203ENST00000407800 1220 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
KRT9P35527 CAPG-205ENST00000409921 1195 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
KRT9P35527 AL353705.2-201ENST00000428243 662 ntBASIC17.09■□□□□ 0.33
KRT9P35527 ELP6-209ENST00000446787 894 ntTSL 3 BASIC17.09■□□□□ 0.33
KRT9P35527 RIMS4-202ENST00000541604 1036 ntAPPRIS ALT1 TSL 1 (best) BASIC17.09■□□□□ 0.33
KRT9P35527 SNHG9-202ENST00000564014 471 ntBASIC17.09■□□□□ 0.33
KRT9P35527 DM1-AS-201ENST00000586251 483 ntTSL 2 BASIC17.09■□□□□ 0.33
KRT9P35527 KLK3-204ENST00000593997 1035 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
KRT9P35527 AC018529.1-201ENST00000613063 361 ntBASIC17.09■□□□□ 0.33
KRT9P35527 AC243571.2-201ENST00000615265 628 ntTSL 3 BASIC17.09■□□□□ 0.33
KRT9P35527 AL732314.4-201ENST00000627627 515 ntTSL 4 BASIC17.09■□□□□ 0.33
KRT9P35527 IER5-201ENST00000367577 4188 ntAPPRIS P1 BASIC17.09■□□□□ 0.33
KRT9P35527 TOM1L2-209ENST00000540946 1420 ntTSL 2 BASIC17.09■□□□□ 0.33
KRT9P35527 CYP2R1-207ENST00000532378 1746 ntTSL 5 BASIC17.09■□□□□ 0.33
KRT9P35527 DIS3-202ENST00000377780 5232 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
KRT9P35527 CIAPIN1-207ENST00000565961 1814 ntTSL 3 BASIC17.09■□□□□ 0.33
KRT9P35527 ATF7-205ENST00000548446 1892 ntAPPRIS ALT1 TSL 2 BASIC17.09■□□□□ 0.33
KRT9P35527 KRAS-202ENST00000311936 5765 ntAPPRIS ALT1 TSL 1 (best) BASIC17.09■□□□□ 0.33
KRT9P35527 ST3GAL3-209ENST00000361400 2195 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
KRT9P35527 SLC2A13-201ENST00000280871 7003 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
KRT9P35527 RABIF-201ENST00000367262 2430 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
KRT9P35527 AC009961.1-203ENST00000607836 2520 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
KRT9P35527 PCDHGB1-202ENST00000611598 2592 ntAPPRIS ALT2 BASIC17.09■□□□□ 0.33
KRT9P35527 PKN2-201ENST00000316005 2632 ntTSL 5 BASIC17.09■□□□□ 0.33
KRT9P35527 GRK6-203ENST00000393576 2792 ntTSL 5 BASIC17.09■□□□□ 0.33
KRT9P35527 SLCO5A1-201ENST00000260126 9076 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
KRT9P35527 ZNF324-201ENST00000196482 3000 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
KRT9P35527 MPP6-201ENST00000222644 8452 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
KRT9P35527 LIMK2-204ENST00000406516 2657 ntTSL 5 BASIC17.08■□□□□ 0.33
KRT9P35527 THUMPD3-210ENST00000515662 2390 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
KRT9P35527 AC005089.1-201ENST00000619486 2241 ntBASIC17.08■□□□□ 0.33
KRT9P35527 CIAPIN1-201ENST00000394391 2182 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
KRT9P35527 AC018755.2-201ENST00000599649 1837 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
KRT9P35527 DNAJC7-202ENST00000426588 1774 ntTSL 2 BASIC17.08■□□□□ 0.33
KRT9P35527 CSNK1G2-AS1-201ENST00000314315 1252 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
KRT9P35527 LCE1A-201ENST00000335123 422 ntAPPRIS P1 BASIC17.08■□□□□ 0.32
KRT9P35527 RFXANK-202ENST00000392324 1059 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
KRT9P35527 CNN2P11-201ENST00000429351 262 ntBASIC17.08■□□□□ 0.32
KRT9P35527 AP006288.1-201ENST00000446065 395 ntBASIC17.08■□□□□ 0.32
KRT9P35527 AC099552.3-201ENST00000454149 367 ntTSL 3 BASIC17.08■□□□□ 0.32
KRT9P35527 AC023141.5-201ENST00000458585 616 ntBASIC17.08■□□□□ 0.32
KRT9P35527 NDUFB2-202ENST00000460088 420 ntTSL 3 BASIC17.08■□□□□ 0.32
KRT9P35527 NT5C3B-215ENST00000521789 993 ntTSL 3 BASIC17.08■□□□□ 0.32
KRT9P35527 GATD1-206ENST00000526325 756 ntTSL 5 BASIC17.08■□□□□ 0.32
KRT9P35527 ZNF576-206ENST00000533118 867 ntAPPRIS P1 TSL 2 BASIC17.08■□□□□ 0.32
KRT9P35527 PPP1R14B-203ENST00000542235 920 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
KRT9P35527 ZNF586-205ENST00000598885 578 ntTSL 4 BASIC17.08■□□□□ 0.32
KRT9P35527 LAMTOR5-208ENST00000614544 846 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
KRT9P35527 AC009093.7-201ENST00000623853 1223 ntBASIC17.08■□□□□ 0.32
KRT9P35527 JPH4-205ENST00000622501 3489 ntAPPRIS ALT1 TSL 5 BASIC17.08■□□□□ 0.32
KRT9P35527 B4GALNT1-201ENST00000341156 3036 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
KRT9P35527 KIAA1191-201ENST00000298569 2991 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
KRT9P35527 AC007191.1-201ENST00000623179 2995 ntBASIC17.08■□□□□ 0.32
KRT9P35527 PRR23C-201ENST00000413199 2791 ntAPPRIS P1 BASIC17.08■□□□□ 0.32
KRT9P35527 PTGFRN-201ENST00000393203 6178 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
KRT9P35527 CYP4F3-203ENST00000586182 2338 ntAPPRIS ALT1 TSL 2 BASIC17.08■□□□□ 0.32
KRT9P35527 ABCC1-201ENST00000399408 6594 ntTSL 5 BASIC17.08■□□□□ 0.32
KRT9P35527 ABCC1-202ENST00000399410 6552 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
KRT9P35527 RNF145-212ENST00000611185 3624 ntAPPRIS P1 TSL 5 BASIC17.08■□□□□ 0.32
KRT9P35527 MYO15B-237ENST00000642007 4893 ntBASIC17.08■□□□□ 0.32
KRT9P35527 TRPM2-AS-202ENST00000456880 2056 ntTSL 2 BASIC17.08■□□□□ 0.32
KRT9P35527 EFNB1-201ENST00000204961 3314 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
KRT9P35527 CYB561-219ENST00000584031 3200 ntTSL 2 BASIC17.08■□□□□ 0.32
KRT9P35527 GRB2-201ENST00000316615 3181 ntTSL 5 BASIC17.08■□□□□ 0.32
KRT9P35527 TRMT10C-201ENST00000309922 1819 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
KRT9P35527 SEPT9-208ENST00000541152 3026 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
KRT9P35527 NRP2-203ENST00000357785 2926 ntAPPRIS P4 TSL 1 (best) BASIC17.07■□□□□ 0.32
KRT9P35527 GPKOW-201ENST00000156109 1742 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
KRT9P35527 KCTD1-203ENST00000417602 1705 ntAPPRIS P1 TSL 5 BASIC17.07■□□□□ 0.32
KRT9P35527 TXNDC2-204ENST00000536353 1703 ntTSL 5 BASIC17.07■□□□□ 0.32
KRT9P35527 EIF4G1-216ENST00000427845 5038 ntTSL 5 BASIC17.07■□□□□ 0.32
KRT9P35527 LIMK2-203ENST00000340552 2789 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
KRT9P35527 GPR137C-201ENST00000321662 3888 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
KRT9P35527 AMPD2-218ENST00000528454 2728 ntTSL 2 BASIC17.07■□□□□ 0.32
KRT9P35527 MIR600HG-201ENST00000449175 5984 ntBASIC17.07■□□□□ 0.32
KRT9P35527 HEATR3-201ENST00000299192 3560 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
KRT9P35527 RALGDS-201ENST00000372047 3598 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
KRT9P35527 TSC1-202ENST00000403810 1507 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
KRT9P35527 CUL3-202ENST00000344951 6592 ntTSL 2 BASIC17.07■□□□□ 0.32
KRT9P35527 COL11A2-201ENST00000341947 6425 ntAPPRIS ALT2 TSL 5 BASIC17.07■□□□□ 0.32
KRT9P35527 BCS1L-212ENST00000439945 1483 ntAPPRIS P1 TSL 5 BASIC17.07■□□□□ 0.32
KRT9P35527 DIAPH2-204ENST00000373054 3376 ntAPPRIS ALT2 TSL 5 BASIC17.07■□□□□ 0.32
KRT9P35527 MAP2K7-201ENST00000397979 3361 ntAPPRIS P3 TSL 1 (best) BASIC17.07■□□□□ 0.32
KRT9P35527 CAMKK2-211ENST00000538733 5175 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
KRT9P35527 PXN-221ENST00000637617 3246 ntAPPRIS ALT2 TSL 5 BASIC17.07■□□□□ 0.32
KRT9P35527 LSS-202ENST00000397728 4936 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
KRT9P35527 MBD1-211ENST00000585595 2179 ntAPPRIS ALT2 TSL 2 BASIC17.07■□□□□ 0.32
Retrieved 100 of 98,524 protein–RNA pairs in 40.8 ms