Protein–RNA interactions for Protein: P35251

RFC1, Replication factor C subunit 1, humanhuman

Predicted RBP Predictions only

Length 1,148 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFC1P35251 AKIP1-204ENST00000396648 1084 ntAPPRIS ALT2 TSL 2 BASIC16.45■□□□□ 0.22
RFC1P35251 GGCT-205ENST00000409436 954 ntTSL 3 BASIC16.45■□□□□ 0.22
RFC1P35251 AC124067.4-202ENST00000522471 397 ntTSL 3 BASIC16.45■□□□□ 0.22
RFC1P35251 MTFR1L-218ENST00000526894 733 ntTSL 4 BASIC16.45■□□□□ 0.22
RFC1P35251 ZNF890P-202ENST00000530367 1156 ntBASIC16.45■□□□□ 0.22
RFC1P35251 WDR25-203ENST00000542471 1214 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
RFC1P35251 TMEM101-204ENST00000587529 965 ntTSL 2 BASIC16.45■□□□□ 0.22
RFC1P35251 AL390955.2-201ENST00000603032 514 ntBASIC16.45■□□□□ 0.22
RFC1P35251 AL390754.1-201ENST00000619088 582 ntBASIC16.45■□□□□ 0.22
RFC1P35251 PCSK6-221ENST00000632686 1210 ntTSL 5 BASIC16.45■□□□□ 0.22
RFC1P35251 HMBOX1-212ENST00000558662 1765 ntTSL 5 BASIC16.45■□□□□ 0.22
RFC1P35251 NR6A1-205ENST00000487099 7031 ntAPPRIS P3 TSL 1 (best) BASIC16.45■□□□□ 0.22
RFC1P35251 PLPP3-201ENST00000371250 3292 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
RFC1P35251 DAAM2-211ENST00000633794 3871 ntTSL 5 BASIC16.45■□□□□ 0.22
RFC1P35251 POLR3D-202ENST00000397802 5494 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
RFC1P35251 KRT15-201ENST00000254043 5237 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
RFC1P35251 ZXDC-202ENST00000389709 3405 ntAPPRIS P4 TSL 1 (best) BASIC16.45■□□□□ 0.22
RFC1P35251 RGL3-201ENST00000380456 2542 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
RFC1P35251 PAK6-203ENST00000542403 2540 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
RFC1P35251 OGFOD2-202ENST00000397389 2308 ntTSL 2 BASIC16.45■□□□□ 0.22
RFC1P35251 TSSC2-204ENST00000529482 2337 ntTSL 2 BASIC16.45■□□□□ 0.22
RFC1P35251 NR2E3-204ENST00000621736 2032 ntTSL 2 BASIC16.45■□□□□ 0.22
RFC1P35251 ZKSCAN2-201ENST00000328086 7523 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
RFC1P35251 DEK-201ENST00000244776 1441 ntTSL 2 BASIC16.45■□□□□ 0.22
RFC1P35251 AMBP-201ENST00000265132 1434 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
RFC1P35251 CBWD2-204ENST00000433343 1411 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
RFC1P35251 MCFD2-201ENST00000319466 4182 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
RFC1P35251 AKR7L-202ENST00000429712 1313 ntAPPRIS P5 TSL 1 (best) BASIC16.45■□□□□ 0.22
RFC1P35251 LINC02268-202ENST00000515444 1328 ntTSL 2 BASIC16.45■□□□□ 0.22
RFC1P35251 EIF2S2-201ENST00000374980 2656 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
RFC1P35251 KIAA1211-201ENST00000264229 4109 ntAPPRIS P2 TSL 2 BASIC16.44■□□□□ 0.22
RFC1P35251 AC091951.1-201ENST00000512854 2465 ntBASIC16.44■□□□□ 0.22
RFC1P35251 DMTN-204ENST00000415253 2394 ntTSL 5 BASIC16.44■□□□□ 0.22
RFC1P35251 AC112484.1-201ENST00000508239 2291 ntAPPRIS P5 TSL 2 BASIC16.44■□□□□ 0.22
RFC1P35251 STBD1-201ENST00000237642 3420 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
RFC1P35251 SF3A2-201ENST00000221494 1963 ntAPPRIS P2 TSL 1 (best) BASIC16.44■□□□□ 0.22
RFC1P35251 NWD2-201ENST00000309447 8325 ntAPPRIS P1 TSL 5 BASIC16.44■□□□□ 0.22
RFC1P35251 SLC2A4-202ENST00000424875 1852 ntTSL 2 BASIC16.44■□□□□ 0.22
RFC1P35251 SYP-207ENST00000479808 1850 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
RFC1P35251 FADS2-210ENST00000522056 1689 ntTSL 2 BASIC16.44■□□□□ 0.22
RFC1P35251 PHACTR3-204ENST00000371015 2728 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
RFC1P35251 MFN2-203ENST00000444836 4531 ntAPPRIS P1 TSL 2 BASIC16.44■□□□□ 0.22
RFC1P35251 KRT8P44-201ENST00000441609 1350 ntBASIC16.44■□□□□ 0.22
RFC1P35251 AC007326.5-201ENST00000640084 1382 ntTSL 5 BASIC16.44■□□□□ 0.22
RFC1P35251 CHIA-203ENST00000353665 1214 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
RFC1P35251 POP5-202ENST00000357500 801 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
RFC1P35251 WFDC3-204ENST00000372632 704 ntTSL 3 BASIC16.44■□□□□ 0.22
RFC1P35251 AGER-204ENST00000375067 1250 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
RFC1P35251 PNMT-202ENST00000394246 821 ntTSL 2 BASIC16.44■□□□□ 0.22
RFC1P35251 ZC3H12D-202ENST00000409948 753 ntTSL 3 BASIC16.44■□□□□ 0.22
RFC1P35251 ESPNP-202ENST00000414828 571 ntTSL 3 BASIC16.44■□□□□ 0.22
RFC1P35251 AC015922.1-201ENST00000421102 1152 ntBASIC16.44■□□□□ 0.22
RFC1P35251 AC092809.2-202ENST00000436706 790 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
RFC1P35251 TEX48-201ENST00000436752 708 ntAPPRIS P1 TSL 5 BASIC16.44■□□□□ 0.22
RFC1P35251 AC009477.1-201ENST00000452936 217 ntBASIC16.44■□□□□ 0.22
RFC1P35251 AC009407.1-201ENST00000568958 598 ntBASIC16.44■□□□□ 0.22
RFC1P35251 SSH2-210ENST00000582084 560 ntTSL 3 BASIC16.44■□□□□ 0.22
RFC1P35251 C1QTNF1-212ENST00000583904 1129 ntAPPRIS P1 TSL 4 BASIC16.44■□□□□ 0.22
RFC1P35251 AC087645.2-202ENST00000586583 643 ntTSL 4 BASIC16.44■□□□□ 0.22
RFC1P35251 TEX48-202ENST00000612244 662 ntTSL 3 BASIC16.44■□□□□ 0.22
RFC1P35251 FAM49B-201ENST00000401979 2024 ntAPPRIS P1 TSL 2 BASIC16.44■□□□□ 0.22
RFC1P35251 ANKS6-202ENST00000375019 2586 ntTSL 5 BASIC16.44■□□□□ 0.22
RFC1P35251 MRI1-202ENST00000319545 3027 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
RFC1P35251 MAGI1-216ENST00000497477 3555 ntTSL 5 BASIC16.44■□□□□ 0.22
RFC1P35251 CD40-207ENST00000620709 1522 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
RFC1P35251 RCOR1-201ENST00000262241 5754 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
RFC1P35251 RUNX1T1-246ENST00000523629 7537 ntAPPRIS P3 TSL 5 BASIC16.44■□□□□ 0.22
RFC1P35251 RTN1-209ENST00000611068 2647 ntTSL 5 BASIC16.44■□□□□ 0.22
RFC1P35251 KCNC1-201ENST00000265969 4295 ntAPPRIS P1 TSL 5 BASIC16.44■□□□□ 0.22
RFC1P35251 SPIB-201ENST00000270632 1443 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
RFC1P35251 EIF1B-AS1-201ENST00000625390 1958 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
RFC1P35251 TNFRSF14-AS1-201ENST00000416860 3522 ntTSL 2 BASIC16.44■□□□□ 0.22
RFC1P35251 SEMA3B-212ENST00000616701 2958 ntAPPRIS P3 TSL 1 (best) BASIC16.44■□□□□ 0.22
RFC1P35251 RAB1A-203ENST00000409784 2447 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
RFC1P35251 AL035460.1-201ENST00000380593 1866 ntAPPRIS P1 TSL 2 BASIC16.44■□□□□ 0.22
RFC1P35251 PRMT2-202ENST00000334494 1334 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
RFC1P35251 ETV2-204ENST00000403402 1335 ntAPPRIS P3 TSL 1 (best) BASIC16.44■□□□□ 0.22
RFC1P35251 ARL10-201ENST00000310389 10845 ntAPPRIS P1 TSL 2 BASIC16.44■□□□□ 0.22
RFC1P35251 EEPD1-205ENST00000534978 2769 ntAPPRIS P1 TSL 2 BASIC16.43■□□□□ 0.22
RFC1P35251 TMEM50A-201ENST00000374358 2683 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
RFC1P35251 LCOR-202ENST00000356016 4834 ntAPPRIS P3 TSL 2 BASIC16.43■□□□□ 0.22
RFC1P35251 DDX55-203ENST00000421670 1574 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
RFC1P35251 AC084364.1-201ENST00000551967 1556 ntBASIC16.43■□□□□ 0.22
RFC1P35251 KANK2-201ENST00000586659 5162 ntAPPRIS P3 TSL 1 (best) BASIC16.43■□□□□ 0.22
RFC1P35251 PRLHR-201ENST00000239032 5446 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
RFC1P35251 APBB1-218ENST00000608655 1920 ntTSL 5 BASIC16.43■□□□□ 0.22
RFC1P35251 MAPK7-204ENST00000395604 3077 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
RFC1P35251 APBA1-201ENST00000265381 6534 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
RFC1P35251 NMRAL1-201ENST00000283429 1376 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
RFC1P35251 RBPMS2-202ENST00000560606 1746 ntTSL 2 BASIC16.43■□□□□ 0.22
RFC1P35251 CCL25-201ENST00000253451 953 ntAPPRIS ALT2 TSL 2 BASIC16.43■□□□□ 0.22
RFC1P35251 HIST2H3D-201ENST00000331491 411 ntAPPRIS P1 BASIC16.43■□□□□ 0.22
RFC1P35251 POLR3GL-202ENST00000369314 1165 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
RFC1P35251 HIST2H3PS2-201ENST00000392948 411 ntAPPRIS P1 BASIC16.43■□□□□ 0.22
RFC1P35251 NME2-201ENST00000393183 568 ntTSL 2 BASIC16.43■□□□□ 0.22
RFC1P35251 AL133481.1-201ENST00000438554 511 ntTSL 5 BASIC16.43■□□□□ 0.22
RFC1P35251 AL356441.1-201ENST00000452618 492 ntTSL 3 BASIC16.43■□□□□ 0.22
RFC1P35251 RNASEK-C17orf49-201ENST00000547302 900 ntAPPRIS P1 TSL 5 BASIC16.43■□□□□ 0.22
RFC1P35251 AC005306.1-201ENST00000587498 661 ntTSL 3 BASIC16.43■□□□□ 0.22
RFC1P35251 AC243964.2-202ENST00000591312 752 ntTSL 2 BASIC16.43■□□□□ 0.22
Retrieved 100 of 98,524 protein–RNA pairs in 70.7 ms