Protein–RNA interactions for Protein: P32297

CHRNA3, Neuronal acetylcholine receptor subunit alpha-3, humanhuman

Predictions only

Length 505 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA3P32297 CBX7-201ENST00000216133 4081 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
CHRNA3P32297 GCFC2-201ENST00000321027 4440 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
CHRNA3P32297 ANKRD2-203ENST00000370655 1451 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
CHRNA3P32297 CLN3-229ENST00000567963 1452 ntTSL 5 BASIC16.47■□□□□ 0.23
CHRNA3P32297 UHRF2-201ENST00000276893 3452 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
CHRNA3P32297 EIF4G1-206ENST00000392537 5229 ntTSL 2 BASIC16.47■□□□□ 0.23
CHRNA3P32297 MROH4P-201ENST00000431302 1578 ntBASIC16.47■□□□□ 0.23
CHRNA3P32297 EXD3-203ENST00000465160 1585 ntTSL 2 BASIC16.47■□□□□ 0.23
CHRNA3P32297 CNN3-207ENST00000545882 1902 ntTSL 2 BASIC16.47■□□□□ 0.23
CHRNA3P32297 COLQ-206ENST00000603808 1668 ntAPPRIS ALT1 TSL 1 (best) BASIC16.46■□□□□ 0.23
CHRNA3P32297 MED15-202ENST00000292733 3252 ntAPPRIS P3 TSL 1 (best) BASIC16.46■□□□□ 0.23
CHRNA3P32297 CLDN22-201ENST00000323319 2581 ntAPPRIS P1 BASIC16.46■□□□□ 0.23
CHRNA3P32297 TGOLN2-205ENST00000409232 2235 ntAPPRIS ALT2 TSL 1 (best) BASIC16.46■□□□□ 0.23
CHRNA3P32297 PRRG2-201ENST00000246794 1404 ntAPPRIS P1 TSL 2 BASIC16.46■□□□□ 0.23
CHRNA3P32297 PPP3CA-207ENST00000512215 4007 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
CHRNA3P32297 DUOXA1-210ENST00000559014 1965 ntTSL 2 BASIC16.46■□□□□ 0.23
CHRNA3P32297 PHRF1-203ENST00000416188 5227 ntAPPRIS P3 TSL 1 (best) BASIC16.46■□□□□ 0.23
CHRNA3P32297 DAGLA-201ENST00000257215 5757 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
CHRNA3P32297 EP400-203ENST00000333577 3092 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
CHRNA3P32297 CLPP-201ENST00000245816 1155 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
CHRNA3P32297 GPHB5-201ENST00000314140 393 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
CHRNA3P32297 PAM16-201ENST00000318059 587 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
CHRNA3P32297 CCDC84-201ENST00000334418 1202 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
CHRNA3P32297 AL365255.1-202ENST00000413887 363 ntTSL 5 BASIC16.46■□□□□ 0.23
CHRNA3P32297 AL669831.5-201ENST00000434264 844 ntTSL 5 BASIC16.46■□□□□ 0.23
CHRNA3P32297 MTND6P24-201ENST00000440466 518 ntBASIC16.46■□□□□ 0.23
CHRNA3P32297 TMEM176B-205ENST00000450753 1006 ntTSL 2 BASIC16.46■□□□□ 0.23
CHRNA3P32297 TMEM161B-AS1-202ENST00000501715 1101 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
CHRNA3P32297 FAM86HP-203ENST00000511564 521 ntTSL 2 BASIC16.46■□□□□ 0.23
CHRNA3P32297 RAB30-AS1-202ENST00000526795 567 ntTSL 5 BASIC16.46■□□□□ 0.23
CHRNA3P32297 RAB1B-202ENST00000527397 991 ntTSL 3 BASIC16.46■□□□□ 0.23
CHRNA3P32297 PPP1R14B-203ENST00000542235 920 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
CHRNA3P32297 AP006333.1-201ENST00000543817 575 ntTSL 4 BASIC16.46■□□□□ 0.23
CHRNA3P32297 RNF24-204ENST00000545616 1128 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
CHRNA3P32297 HCFC1R1-203ENST00000572355 610 ntTSL 3 BASIC16.46■□□□□ 0.23
CHRNA3P32297 AC004771.3-201ENST00000574260 551 ntTSL 4 BASIC16.46■□□□□ 0.23
CHRNA3P32297 AC016168.1-201ENST00000591422 722 ntTSL 3 BASIC16.46■□□□□ 0.23
CHRNA3P32297 AL450472.2-201ENST00000603663 1156 ntBASIC16.46■□□□□ 0.23
CHRNA3P32297 RN7SL828P-201ENST00000607615 303 ntBASIC16.46■□□□□ 0.23
CHRNA3P32297 GPER1-207ENST00000619052 571 ntTSL 2 BASIC16.46■□□□□ 0.23
CHRNA3P32297 AJ011932.1-201ENST00000621707 465 ntBASIC16.46■□□□□ 0.23
CHRNA3P32297 NEK7-202ENST00000367385 4149 ntAPPRIS P1 TSL 5 BASIC16.46■□□□□ 0.23
CHRNA3P32297 DRC3-202ENST00000399182 1923 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
CHRNA3P32297 WDR6-222ENST00000615452 1949 ntTSL 5 BASIC16.46■□□□□ 0.23
CHRNA3P32297 ELMSAN1-201ENST00000286523 8091 ntAPPRIS P2 TSL 1 (best) BASIC16.46■□□□□ 0.23
CHRNA3P32297 ALK-201ENST00000389048 6220 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
CHRNA3P32297 DUSP11-201ENST00000272444 1653 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
CHRNA3P32297 LMNA-203ENST00000368297 1679 ntTSL 2 BASIC16.46■□□□□ 0.23
CHRNA3P32297 HCFC1-201ENST00000310441 8869 ntAPPRIS P2 TSL 1 (best) BASIC16.46■□□□□ 0.22
CHRNA3P32297 INTS14-204ENST00000442903 1863 ntTSL 2 BASIC16.46■□□□□ 0.22
CHRNA3P32297 KIAA1211-206ENST00000541073 4117 ntAPPRIS ALT2 TSL 1 (best) BASIC16.46■□□□□ 0.22
CHRNA3P32297 CERNA1-202ENST00000560518 1972 ntTSL 2 BASIC16.46■□□□□ 0.22
CHRNA3P32297 AC023024.2-201ENST00000623561 1993 ntBASIC16.46■□□□□ 0.22
CHRNA3P32297 SBF1-201ENST00000348911 6045 ntAPPRIS ALT2 TSL 5 BASIC16.46■□□□□ 0.22
CHRNA3P32297 DHRS4L2-205ENST00000543805 1334 ntTSL 5 BASIC16.45■□□□□ 0.22
CHRNA3P32297 OGFRL1-201ENST00000370435 8391 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
CHRNA3P32297 INPP5B-202ENST00000373023 4694 ntAPPRIS ALT2 TSL 5 BASIC16.45■□□□□ 0.22
CHRNA3P32297 RASGRF1-203ENST00000558480 6237 ntAPPRIS P1 TSL 2 BASIC16.45■□□□□ 0.22
CHRNA3P32297 IRF3-217ENST00000597198 1741 ntAPPRIS P1 TSL 2 BASIC16.45■□□□□ 0.22
CHRNA3P32297 NPHP3-AS1-201ENST00000489343 2957 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
CHRNA3P32297 JAKMIP1-205ENST00000410077 1835 ntTSL 2 BASIC16.45■□□□□ 0.22
CHRNA3P32297 TEN1-CDK3-202ENST00000569284 3287 ntAPPRIS P1 TSL 2 BASIC16.45■□□□□ 0.22
CHRNA3P32297 IRF2BP2-202ENST00000366610 4615 ntAPPRIS ALT2 TSL 1 (best) BASIC16.45■□□□□ 0.22
CHRNA3P32297 AL390755.1-201ENST00000623716 2027 ntBASIC16.45■□□□□ 0.22
CHRNA3P32297 KLF5-201ENST00000377687 3566 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
CHRNA3P32297 SYNGR2-207ENST00000590201 2239 ntTSL 5 BASIC16.45■□□□□ 0.22
CHRNA3P32297 COCH-202ENST00000396618 2536 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
CHRNA3P32297 SLC26A11-203ENST00000546047 2807 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
CHRNA3P32297 AC023908.3-201ENST00000564211 3047 ntBASIC16.45■□□□□ 0.22
CHRNA3P32297 POLR1C-201ENST00000304004 1280 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
CHRNA3P32297 OR52W1-201ENST00000311352 1114 ntAPPRIS P1 BASIC16.45■□□□□ 0.22
CHRNA3P32297 ASMT-201ENST00000381229 1087 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
CHRNA3P32297 AL512638.1-201ENST00000457493 794 ntBASIC16.45■□□□□ 0.22
CHRNA3P32297 CALML4-206ENST00000467889 987 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
CHRNA3P32297 MTFR1L-218ENST00000526894 733 ntTSL 4 BASIC16.45■□□□□ 0.22
CHRNA3P32297 AKIP1-211ENST00000534506 576 ntTSL 3 BASIC16.45■□□□□ 0.22
CHRNA3P32297 BANF1P1-201ENST00000553684 263 ntBASIC16.45■□□□□ 0.22
CHRNA3P32297 COMMD4-207ENST00000562789 746 ntTSL 2 BASIC16.45■□□□□ 0.22
CHRNA3P32297 AC010336.3-201ENST00000597156 667 ntTSL 2 BASIC16.45■□□□□ 0.22
CHRNA3P32297 ALKBH7-203ENST00000599849 556 ntTSL 3 BASIC16.45■□□□□ 0.22
CHRNA3P32297 SPDYE12P-201ENST00000618416 771 ntBASIC16.45■□□□□ 0.22
CHRNA3P32297 RCAN3-211ENST00000630217 658 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
CHRNA3P32297 H2AFY-202ENST00000312469 1859 ntTSL 5 BASIC16.45■□□□□ 0.22
CHRNA3P32297 CRHBP-201ENST00000274368 1980 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
CHRNA3P32297 PRKRIP1-201ENST00000397912 2159 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
CHRNA3P32297 TGM6-201ENST00000202625 2292 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
CHRNA3P32297 GLIDR-202ENST00000625350 2588 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
CHRNA3P32297 RBPJ-205ENST00000355476 5990 ntAPPRIS P3 TSL 1 (best) BASIC16.45■□□□□ 0.22
CHRNA3P32297 ZSWIM8-201ENST00000398706 6062 ntTSL 2 BASIC16.45■□□□□ 0.22
CHRNA3P32297 AKAP12-201ENST00000253332 6597 ntAPPRIS P4 TSL 1 (best) BASIC16.45■□□□□ 0.22
CHRNA3P32297 ANKHD1-EIF4EBP3-203ENST00000532219 8246 ntAPPRIS P1 TSL 2 BASIC16.45■□□□□ 0.22
CHRNA3P32297 MFN2-203ENST00000444836 4531 ntAPPRIS P1 TSL 2 BASIC16.45■□□□□ 0.22
CHRNA3P32297 CARNMT1-202ENST00000376834 4130 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
CHRNA3P32297 APBB1-217ENST00000608645 1925 ntTSL 5 BASIC16.45■□□□□ 0.22
CHRNA3P32297 ZNF286A-218ENST00000583566 1806 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
CHRNA3P32297 HAUS2-208ENST00000568876 1702 ntTSL 4 BASIC16.45■□□□□ 0.22
CHRNA3P32297 KREMEN1-203ENST00000407188 1422 ntAPPRIS ALT2 TSL 1 (best) BASIC16.45■□□□□ 0.22
CHRNA3P32297 PTOV1-219ENST00000601638 1413 ntTSL 5 BASIC16.45■□□□□ 0.22
CHRNA3P32297 SESN1-202ENST00000356644 2676 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
CHRNA3P32297 BRF1-203ENST00000379937 3314 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
Retrieved 100 of 98,524 protein–RNA pairs in 39.9 ms