Protein–RNA interactions for Protein: P30260

CDC27, Cell division cycle protein 27 homolog, humanhuman

Predictions only

Length 824 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDC27P30260 SHOX2-202ENST00000425436 1513 ntTSL 5 BASIC18■□□□□ 0.47
CDC27P30260 ZC2HC1C-202ENST00000439583 1509 ntTSL 1 (best) BASIC18■□□□□ 0.47
CDC27P30260 ZCCHC17-206ENST00000616393 1534 ntTSL 5 BASIC18■□□□□ 0.47
CDC27P30260 SLC9A2-201ENST00000233969 5410 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
CDC27P30260 SLC8B1-201ENST00000202831 2975 ntAPPRIS P1 TSL 5 BASIC18■□□□□ 0.47
CDC27P30260 YBEY-202ENST00000339195 890 ntTSL 1 (best) BASIC18■□□□□ 0.47
CDC27P30260 GJB6-202ENST00000356192 2131 ntAPPRIS P1 TSL 2 BASIC18■□□□□ 0.47
CDC27P30260 LCE3E-201ENST00000368789 611 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
CDC27P30260 SDHB-201ENST00000375499 1153 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
CDC27P30260 MAP9-202ENST00000379248 1165 ntTSL 1 (best) BASIC18■□□□□ 0.47
CDC27P30260 PDGFB-202ENST00000381551 1125 ntTSL 5 BASIC18■□□□□ 0.47
CDC27P30260 YBEY-203ENST00000397691 764 ntAPPRIS P1 TSL 3 BASIC18■□□□□ 0.47
CDC27P30260 AC104457.1-201ENST00000401024 814 ntBASIC18■□□□□ 0.47
CDC27P30260 AC073133.1-201ENST00000426187 432 ntTSL 3 BASIC18■□□□□ 0.47
CDC27P30260 AL691459.1-201ENST00000438589 407 ntTSL 3 BASIC18■□□□□ 0.47
CDC27P30260 GALT-202ENST00000450095 1280 ntTSL 2 BASIC18■□□□□ 0.47
CDC27P30260 LINC02242-201ENST00000507298 641 ntTSL 5 BASIC18■□□□□ 0.47
CDC27P30260 AC026410.3-201ENST00000514280 936 ntBASIC18■□□□□ 0.47
CDC27P30260 WASH4P-201ENST00000564273 1246 ntBASIC18■□□□□ 0.47
CDC27P30260 AP000845.1-201ENST00000581677 2131 ntBASIC18■□□□□ 0.47
CDC27P30260 AP001033.1-201ENST00000584509 466 ntTSL 3 BASIC18■□□□□ 0.47
CDC27P30260 Metazoa_SRP.112-201ENST00000613101 279 ntBASIC18■□□□□ 0.47
CDC27P30260 AC243829.4-204ENST00000616926 1115 ntTSL 5 BASIC18■□□□□ 0.47
CDC27P30260 AL645728.2-202ENST00000641679 227 ntBASIC18■□□□□ 0.47
CDC27P30260 HOGA1-202ENST00000370646 2488 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
CDC27P30260 ARMC6-206ENST00000535612 2488 ntTSL 1 (best) BASIC18■□□□□ 0.47
CDC27P30260 MTA2-201ENST00000278823 3058 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
CDC27P30260 TAF3-201ENST00000344293 4872 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
CDC27P30260 PTBP1-204ENST00000394601 3185 ntTSL 1 (best) BASIC18■□□□□ 0.47
CDC27P30260 PDLIM5-202ENST00000318007 1960 ntTSL 1 (best) BASIC18■□□□□ 0.47
CDC27P30260 GLUL-201ENST00000311223 4719 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
CDC27P30260 SYT5-207ENST00000590851 3619 ntTSL 2 BASIC18■□□□□ 0.47
CDC27P30260 AFAP1L2-202ENST00000369271 3964 ntAPPRIS ALT2 TSL 1 (best) BASIC18■□□□□ 0.47
CDC27P30260 AGAP7P-201ENST00000582299 2062 ntBASIC18■□□□□ 0.47
CDC27P30260 AGAP14-201ENST00000624701 2060 ntBASIC18■□□□□ 0.47
CDC27P30260 LINC00094-205ENST00000603928 5722 ntAPPRIS ALT2 TSL 2 BASIC18■□□□□ 0.47
CDC27P30260 KRT9-202ENST00000588431 1493 ntTSL 1 (best) BASIC18■□□□□ 0.47
CDC27P30260 LINC00221-202ENST00000619530 1499 ntTSL 2 BASIC18■□□□□ 0.47
CDC27P30260 BRAP-201ENST00000327551 1947 ntTSL 1 (best) BASIC18■□□□□ 0.47
CDC27P30260 ACTL6A-202ENST00000429709 1901 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
CDC27P30260 APBB1-217ENST00000608645 1925 ntTSL 5 BASIC18■□□□□ 0.47
CDC27P30260 TAOK2-202ENST00000308893 5169 ntAPPRIS P4 TSL 1 (best) BASIC18■□□□□ 0.47
CDC27P30260 CYP2E1-201ENST00000252945 1667 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
CDC27P30260 MEOX1-202ENST00000329168 2129 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
CDC27P30260 UCK1-203ENST00000372211 2114 ntTSL 3 BASIC17.99■□□□□ 0.47
CDC27P30260 SP140L-204ENST00000444636 1781 ntTSL 5 BASIC17.99■□□□□ 0.47
CDC27P30260 TBP-207ENST00000616883 1750 ntAPPRIS ALT2 TSL 5 BASIC17.99■□□□□ 0.47
CDC27P30260 TJAP1-207ENST00000436109 2572 ntAPPRIS P1 TSL 5 BASIC17.99■□□□□ 0.47
CDC27P30260 LINC00884-202ENST00000448892 2680 ntTSL 5 BASIC17.99■□□□□ 0.47
CDC27P30260 ATE1-209ENST00000543447 4826 ntTSL 2 BASIC17.99■□□□□ 0.47
CDC27P30260 POM121C-206ENST00000607367 3690 ntAPPRIS ALT2 TSL 5 BASIC17.99■□□□□ 0.47
CDC27P30260 MAX-204ENST00000358402 1973 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
CDC27P30260 SLC25A32-201ENST00000297578 2891 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
CDC27P30260 MKNK2-201ENST00000250896 3774 ntAPPRIS P4 TSL 5 BASIC17.99■□□□□ 0.47
CDC27P30260 ITSN2-201ENST00000355123 6300 ntAPPRIS P4 TSL 1 (best) BASIC17.99■□□□□ 0.47
CDC27P30260 LRCH3-202ENST00000414675 2299 ntAPPRIS ALT2 TSL 2 BASIC17.99■□□□□ 0.47
CDC27P30260 ZSCAN2-203ENST00000334141 993 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
CDC27P30260 AL353779.1-201ENST00000434793 351 ntBASIC17.99■□□□□ 0.47
CDC27P30260 AC087294.1-202ENST00000439136 487 ntTSL 3 BASIC17.99■□□□□ 0.47
CDC27P30260 KCNQ1DN-201ENST00000441418 1093 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
CDC27P30260 AC087294.1-201ENST00000580291 1152 ntTSL 2 BASIC17.99■□□□□ 0.47
CDC27P30260 AC092364.2-202ENST00000597012 1073 ntBASIC17.99■□□□□ 0.47
CDC27P30260 AC093726.1-201ENST00000608064 963 ntBASIC17.99■□□□□ 0.47
CDC27P30260 PRF1-203ENST00000638674 1080 ntTSL 5 BASIC17.99■□□□□ 0.47
CDC27P30260 EPHA8-201ENST00000166244 4943 ntAPPRIS P1 TSL 2 BASIC17.99■□□□□ 0.47
CDC27P30260 ASB10-201ENST00000275838 1820 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
CDC27P30260 TMTC2-201ENST00000321196 5681 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
CDC27P30260 CLYBL-203ENST00000376355 6771 ntAPPRIS P1 TSL 2 BASIC17.99■□□□□ 0.47
CDC27P30260 COX11-201ENST00000299335 2497 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
CDC27P30260 ZFP3-201ENST00000318833 5206 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
CDC27P30260 SNHG15-202ENST00000577700 3116 ntTSL 2 BASIC17.99■□□□□ 0.47
CDC27P30260 ABLIM2-201ENST00000341937 2589 ntAPPRIS ALT2 TSL 1 (best) BASIC17.99■□□□□ 0.47
CDC27P30260 NTRK2-207ENST00000376214 5608 ntAPPRIS P3 TSL 5 BASIC17.99■□□□□ 0.47
CDC27P30260 CNOT6-207ENST00000618123 6250 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
CDC27P30260 DGAT2L6-201ENST00000333026 1553 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
CDC27P30260 HNRNPR-204ENST00000427764 1788 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
CDC27P30260 LINC01136-203ENST00000457348 2539 ntTSL 2 BASIC17.99■□□□□ 0.47
CDC27P30260 CNTNAP3-201ENST00000297668 5064 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
CDC27P30260 SCLT1-208ENST00000506368 2096 ntAPPRIS ALT2 TSL 1 (best) BASIC17.99■□□□□ 0.47
CDC27P30260 JAKMIP1-205ENST00000410077 1835 ntTSL 2 BASIC17.98■□□□□ 0.47
CDC27P30260 TPRX1-201ENST00000322175 1924 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
CDC27P30260 DPP9-210ENST00000597849 2025 ntTSL 5 BASIC17.98■□□□□ 0.47
CDC27P30260 FAN1-207ENST00000565466 2304 ntTSL 2 BASIC17.98■□□□□ 0.47
CDC27P30260 TNFRSF14-AS1-201ENST00000416860 3522 ntTSL 2 BASIC17.98■□□□□ 0.47
CDC27P30260 B9D2-201ENST00000243578 1027 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
CDC27P30260 SFT2D1-201ENST00000361731 1079 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
CDC27P30260 ATP1A1-AS1-202ENST00000369492 1011 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
CDC27P30260 PIN1P1-201ENST00000412108 996 ntBASIC17.98■□□□□ 0.47
CDC27P30260 AC093459.1-202ENST00000438963 768 ntTSL 3 BASIC17.98■□□□□ 0.47
CDC27P30260 ELK1P1-201ENST00000485699 580 ntBASIC17.98■□□□□ 0.47
CDC27P30260 TERF1P3-201ENST00000505638 1227 ntBASIC17.98■□□□□ 0.47
CDC27P30260 AC009686.1-201ENST00000522494 364 ntTSL 3 BASIC17.98■□□□□ 0.47
CDC27P30260 POLD4-211ENST00000539074 714 ntTSL 3 BASIC17.98■□□□□ 0.47
CDC27P30260 AC090825.1-203ENST00000558188 582 ntTSL 3 BASIC17.98■□□□□ 0.47
CDC27P30260 SECTM1-202ENST00000580437 1030 ntAPPRIS ALT2 TSL 2 BASIC17.98■□□□□ 0.47
CDC27P30260 AC124287.1-201ENST00000582249 838 ntTSL 3 BASIC17.98■□□□□ 0.47
CDC27P30260 CTBP2P3-201ENST00000585629 1255 ntBASIC17.98■□□□□ 0.47
CDC27P30260 YIF1B-214ENST00000591784 940 ntTSL 5 BASIC17.98■□□□□ 0.47
CDC27P30260 AC008758.5-201ENST00000595562 617 ntAPPRIS P1 TSL 4 BASIC17.98■□□□□ 0.47
CDC27P30260 AC005785.1-202ENST00000597164 237 ntTSL 3 BASIC17.98■□□□□ 0.47
Retrieved 100 of 98,524 protein–RNA pairs in 47.7 ms