Protein–RNA interactions for Protein: P28290

SSFA2, Sperm-specific antigen 2, humanhuman

Predictions only

Length 1,259 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSFA2P28290 TCOF1-206ENST00000445265 4825 ntAPPRIS ALT2 TSL 5 BASIC19.97■□□□□ 0.79
SSFA2P28290 VILL-207ENST00000465644 1857 ntTSL 5 BASIC19.97■□□□□ 0.79
SSFA2P28290 EXT2-210ENST00000533608 3136 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
SSFA2P28290 STT3B-201ENST00000295770 4248 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
SSFA2P28290 AP4B1-204ENST00000369569 2818 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
SSFA2P28290 ZNF418-208ENST00000599852 2501 ntTSL 2 BASIC19.97■□□□□ 0.79
SSFA2P28290 CACNG5-201ENST00000307139 926 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
SSFA2P28290 ZNF248-202ENST00000374648 1286 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
SSFA2P28290 TPT1-AS1-203ENST00000412946 744 ntTSL 3 BASIC19.97■□□□□ 0.79
SSFA2P28290 AP000350.4-201ENST00000433835 788 ntAPPRIS P1 TSL 5 BASIC19.97■□□□□ 0.79
SSFA2P28290 HOMER2P2-201ENST00000451621 847 ntBASIC19.97■□□□□ 0.79
SSFA2P28290 CHL1-AS2-203ENST00000452919 726 ntTSL 2 BASIC19.97■□□□□ 0.79
SSFA2P28290 CENPBD1P1-203ENST00000479047 569 ntTSL 3 BASIC19.97■□□□□ 0.79
SSFA2P28290 AP001582.1-201ENST00000525856 295 ntBASIC19.97■□□□□ 0.79
SSFA2P28290 RERG-205ENST00000537647 935 ntTSL 2 BASIC19.97■□□□□ 0.79
SSFA2P28290 AC104982.3-201ENST00000581995 514 ntBASIC19.97■□□□□ 0.79
SSFA2P28290 EEF1DP1-201ENST00000585891 896 ntBASIC19.97■□□□□ 0.79
SSFA2P28290 PRCD-204ENST00000586148 630 ntAPPRIS P1 TSL 5 BASIC19.97■□□□□ 0.79
SSFA2P28290 PRCD-210ENST00000592014 462 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
SSFA2P28290 AC008403.1-201ENST00000595676 443 ntAPPRIS P1 TSL 2 BASIC19.97■□□□□ 0.79
SSFA2P28290 AC132938.4-201ENST00000623835 848 ntBASIC19.97■□□□□ 0.79
SSFA2P28290 BTNL9-201ENST00000327705 3500 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
SSFA2P28290 POTEE-204ENST00000613282 1926 ntTSL 5 BASIC19.97■□□□□ 0.79
SSFA2P28290 POTEI-202ENST00000615053 1926 ntTSL 5 BASIC19.97■□□□□ 0.79
SSFA2P28290 AKTIP-202ENST00000394657 2426 ntAPPRIS P3 TSL 2 BASIC19.97■□□□□ 0.79
SSFA2P28290 SNAPC3-202ENST00000380821 5680 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
SSFA2P28290 AK5-203ENST00000354567 3251 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
SSFA2P28290 USP27X-201ENST00000621775 2618 ntAPPRIS P1 BASIC19.97■□□□□ 0.79
SSFA2P28290 RUSC1-203ENST00000368349 1968 ntAPPRIS P3 TSL 1 (best) BASIC19.97■□□□□ 0.79
SSFA2P28290 CES1-202ENST00000361503 1835 ntAPPRIS ALT1 TSL 1 (best) BASIC19.97■□□□□ 0.79
SSFA2P28290 SLC6A9-204ENST00000372307 2162 ntTSL 2 BASIC19.97■□□□□ 0.79
SSFA2P28290 SHANK1-201ENST00000293441 6643 ntAPPRIS P2 TSL 1 (best) BASIC19.97■□□□□ 0.79
SSFA2P28290 TLE6-202ENST00000452088 1883 ntAPPRIS P3 TSL 1 (best) BASIC19.96■□□□□ 0.79
SSFA2P28290 LY9-204ENST00000368039 1364 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
SSFA2P28290 EML3-202ENST00000394773 3256 ntAPPRIS P2 TSL 1 (best) BASIC19.96■□□□□ 0.79
SSFA2P28290 CYP4F3-202ENST00000585846 2056 ntAPPRIS ALT1 TSL 1 (best) BASIC19.96■□□□□ 0.79
SSFA2P28290 LARP4-219ENST00000614335 1949 ntTSL 5 BASIC19.96■□□□□ 0.79
SSFA2P28290 MYCBPAP-201ENST00000323776 3186 ntAPPRIS P2 TSL 1 (best) BASIC19.96■□□□□ 0.79
SSFA2P28290 MGME1-201ENST00000377704 1781 ntTSL 3 BASIC19.96■□□□□ 0.79
SSFA2P28290 CACFD1-201ENST00000291722 2688 ntTSL 2 BASIC19.96■□□□□ 0.79
SSFA2P28290 KIFC1-211ENST00000428849 2706 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
SSFA2P28290 CBY1-201ENST00000216029 1133 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
SSFA2P28290 BEX5-201ENST00000333643 857 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
SSFA2P28290 AL445430.1-201ENST00000419796 699 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
SSFA2P28290 FNTAP2-201ENST00000430308 634 ntBASIC19.96■□□□□ 0.79
SSFA2P28290 AL157392.3-216ENST00000437446 462 ntTSL 3 BASIC19.96■□□□□ 0.79
SSFA2P28290 AL450003.2-201ENST00000450445 428 ntTSL 5 BASIC19.96■□□□□ 0.79
SSFA2P28290 REEP1-202ENST00000453231 940 ntTSL 2 BASIC19.96■□□□□ 0.79
SSFA2P28290 APOA2-204ENST00000464492 530 ntTSL 3 BASIC19.96■□□□□ 0.79
SSFA2P28290 FHIT-208ENST00000492590 1081 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
SSFA2P28290 TPO-215ENST00000539820 1157 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
SSFA2P28290 AC015910.1-201ENST00000579400 975 ntBASIC19.96■□□□□ 0.79
SSFA2P28290 YIF1B-215ENST00000592246 936 ntTSL 3 BASIC19.96■□□□□ 0.79
SSFA2P28290 SMCO4-206ENST00000596676 180 ntAPPRIS P1 BASIC19.96■□□□□ 0.79
SSFA2P28290 AL450472.2-201ENST00000603663 1156 ntBASIC19.96■□□□□ 0.79
SSFA2P28290 NKPD1-201ENST00000317951 4233 ntAPPRIS P1 TSL 2 BASIC19.96■□□□□ 0.79
SSFA2P28290 KRT9-202ENST00000588431 1493 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
SSFA2P28290 NFIX-210ENST00000588228 1692 ntTSL 2 BASIC19.96■□□□□ 0.79
SSFA2P28290 HIP1R-201ENST00000253083 4539 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
SSFA2P28290 PCMTD2-207ENST00000609372 1321 ntTSL 4 BASIC19.96■□□□□ 0.79
SSFA2P28290 AC015818.8-201ENST00000587907 1519 ntBASIC19.96■□□□□ 0.79
SSFA2P28290 ZCCHC17-206ENST00000616393 1534 ntTSL 5 BASIC19.96■□□□□ 0.79
SSFA2P28290 PDZRN3-201ENST00000263666 4248 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
SSFA2P28290 DIXDC1-208ENST00000615255 4825 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
SSFA2P28290 NTRK2-207ENST00000376214 5608 ntAPPRIS P3 TSL 5 BASIC19.96■□□□□ 0.79
SSFA2P28290 AP003397.1-201ENST00000525706 1387 ntTSL 1 (best) BASIC19.95■□□□□ 0.79
SSFA2P28290 PSMC3-209ENST00000530912 1390 ntTSL 5 BASIC19.95■□□□□ 0.79
SSFA2P28290 SFTPA2-201ENST00000372325 2189 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
SSFA2P28290 SHISA5-208ENST00000442747 2250 ntTSL 2 BASIC19.95■□□□□ 0.78
SSFA2P28290 MYCBPAP-203ENST00000436259 3102 ntAPPRIS ALT2 TSL 5 BASIC19.95■□□□□ 0.78
SSFA2P28290 RASSF1-205ENST00000395126 1657 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
SSFA2P28290 AC141586.1-201ENST00000399702 2748 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
SSFA2P28290 LONRF1-201ENST00000398246 3594 ntAPPRIS P1 TSL 5 BASIC19.95■□□□□ 0.78
SSFA2P28290 AP001282.1-201ENST00000531301 1499 ntBASIC19.95■□□□□ 0.78
SSFA2P28290 SLC2A14-202ENST00000396589 2335 ntAPPRIS P3 TSL 1 (best) BASIC19.95■□□□□ 0.78
SSFA2P28290 C8orf74-201ENST00000304519 1036 ntAPPRIS P2 TSL 1 (best) BASIC19.95■□□□□ 0.78
SSFA2P28290 CSH2-201ENST00000336844 1173 ntTSL 2 BASIC19.95■□□□□ 0.78
SSFA2P28290 CSH2-202ENST00000345366 598 ntTSL 5 BASIC19.95■□□□□ 0.78
SSFA2P28290 HIST3H3-201ENST00000366696 481 ntAPPRIS P1 BASIC19.95■□□□□ 0.78
SSFA2P28290 IFITM5-201ENST00000382614 736 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
SSFA2P28290 IGLV4-69-201ENST00000390282 419 ntAPPRIS P1 BASIC19.95■□□□□ 0.78
SSFA2P28290 AL139420.1-201ENST00000439394 653 ntTSL 3 BASIC19.95■□□□□ 0.78
SSFA2P28290 HIST2H2BC-201ENST00000498492 580 ntBASIC19.95■□□□□ 0.78
SSFA2P28290 AC100858.3-202ENST00000533496 553 ntTSL 4 BASIC19.95■□□□□ 0.78
SSFA2P28290 AC007406.3-201ENST00000537295 1063 ntTSL 2 BASIC19.95■□□□□ 0.78
SSFA2P28290 AC011447.3-204ENST00000585498 883 ntTSL 2 BASIC19.95■□□□□ 0.78
SSFA2P28290 AC068473.4-201ENST00000587527 585 ntTSL 4 BASIC19.95■□□□□ 0.78
SSFA2P28290 HCG18-245ENST00000602550 559 ntTSL 4 BASIC19.95■□□□□ 0.78
SSFA2P28290 IFITM3-204ENST00000602735 713 ntAPPRIS ALT1 TSL 5 BASIC19.95■□□□□ 0.78
SSFA2P28290 SPATA21-206ENST00000612240 603 ntTSL 5 BASIC19.95■□□□□ 0.78
SSFA2P28290 AC145423.3-201ENST00000615987 467 ntBASIC19.95■□□□□ 0.78
SSFA2P28290 TBC1D3D-201ENST00000616101 2116 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
SSFA2P28290 TBC1D3K-201ENST00000620247 2116 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
SSFA2P28290 CRAT-201ENST00000318080 2763 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
SSFA2P28290 CALCR-207ENST00000426151 1741 ntAPPRIS P3 TSL 1 (best) BASIC19.95■□□□□ 0.78
SSFA2P28290 CDC14A-202ENST00000361544 2417 ntAPPRIS P4 TSL 1 (best) BASIC19.95■□□□□ 0.78
SSFA2P28290 HNRNPR-204ENST00000427764 1788 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
SSFA2P28290 ZNF382-202ENST00000423582 2657 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
SSFA2P28290 IQCF5-AS1-201ENST00000440723 2000 ntTSL 2 BASIC19.95■□□□□ 0.78
SSFA2P28290 TBC1D26-206ENST00000579428 1583 ntTSL 2 BASIC19.95■□□□□ 0.78
Retrieved 100 of 98,524 protein–RNA pairs in 91.2 ms