Protein–RNA interactions for Protein: P25054

APC, Adenomatous polyposis coli protein, humanhuman

Predictions only

Length 2,843 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APCP25054 AC138696.2-201ENST00000607376 223 ntBASIC12.71□□□□□ -0.37
APCP25054 AC002472.3-201ENST00000640124 621 ntBASIC12.71□□□□□ -0.37
APCP25054 CHRNB1-201ENST00000306071 2557 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
APCP25054 CCNE1-202ENST00000357943 1641 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
APCP25054 MTA2-204ENST00000527204 2265 ntTSL 2 BASIC12.71□□□□□ -0.37
APCP25054 VAV3-202ENST00000370056 4990 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
APCP25054 FGFR3-210ENST00000613647 4438 ntTSL 5 BASIC12.71□□□□□ -0.37
APCP25054 MAGEA4-206ENST00000393921 1727 ntAPPRIS P1 TSL 5 BASIC12.71□□□□□ -0.37
APCP25054 CABIN1-202ENST00000337989 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC12.71□□□□□ -0.37
APCP25054 AL137058.1-201ENST00000418237 673 ntTSL 5 BASIC12.71□□□□□ -0.37
APCP25054 AREG-202ENST00000502307 956 ntTSL 5 BASIC12.71□□□□□ -0.37
APCP25054 HNRNPA1P36-201ENST00000521313 955 ntBASIC12.71□□□□□ -0.37
APCP25054 AC025154.2-202ENST00000552379 592 ntTSL 3 BASIC12.71□□□□□ -0.37
APCP25054 MIR4472-1-201ENST00000584349 80 ntBASIC12.71□□□□□ -0.37
APCP25054 AC004637.1-201ENST00000586675 482 ntTSL 3 BASIC12.71□□□□□ -0.37
APCP25054 SMIM24-203ENST00000587847 820 ntAPPRIS ALT2 TSL 1 (best) BASIC12.71□□□□□ -0.37
APCP25054 TMIGD2-204ENST00000600349 333 ntAPPRIS ALT2 TSL 1 (best) BASIC12.71□□□□□ -0.37
APCP25054 AC012073.1-201ENST00000606114 1108 ntBASIC12.71□□□□□ -0.37
APCP25054 CD79B-201ENST00000006750 1269 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
APCP25054 AC009802.1-201ENST00000637973 1609 ntTSL 5 BASIC12.71□□□□□ -0.37
APCP25054 UBE2QL1-201ENST00000399816 4317 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
APCP25054 NR4A1-213ENST00000550082 2029 ntTSL 5 BASIC12.71□□□□□ -0.38
APCP25054 TRIM27-201ENST00000377194 2686 ntTSL 1 (best) BASIC12.71□□□□□ -0.38
APCP25054 AL645608.8-201ENST00000606034 2086 ntBASIC12.71□□□□□ -0.38
APCP25054 SEL1L3-202ENST00000399878 4520 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
APCP25054 KCNA2-201ENST00000316361 2827 ntAPPRIS P1 TSL 2 BASIC12.71□□□□□ -0.38
APCP25054 ASB3-202ENST00000394717 1734 ntTSL 2 BASIC12.71□□□□□ -0.38
APCP25054 CDK11B-209ENST00000629312 2496 ntTSL 5 BASIC12.71□□□□□ -0.38
APCP25054 PLEKHF2-201ENST00000315367 2881 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
APCP25054 NDUFB6-203ENST00000379847 1366 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
APCP25054 AL035460.1-201ENST00000380593 1866 ntAPPRIS P1 TSL 2 BASIC12.71□□□□□ -0.38
APCP25054 MAPKAPK5-207ENST00000551404 1630 ntAPPRIS P4 TSL 5 BASIC12.71□□□□□ -0.38
APCP25054 AC006449.6-201ENST00000612330 2296 ntBASIC12.71□□□□□ -0.38
APCP25054 CXCL14-202ENST00000512158 1760 ntAPPRIS ALT2 TSL 1 (best) BASIC12.71□□□□□ -0.38
APCP25054 GFRA2-204ENST00000518077 1503 ntTSL 1 (best) BASIC12.71□□□□□ -0.38
APCP25054 TNNI2-201ENST00000252898 678 ntAPPRIS P3 TSL 3 BASIC12.7□□□□□ -0.38
APCP25054 LCE3B-201ENST00000335633 288 ntAPPRIS P1 BASIC12.7□□□□□ -0.38
APCP25054 SLC50A1-202ENST00000368401 1166 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
APCP25054 TNNI2-202ENST00000381905 706 ntAPPRIS ALT1 TSL 3 BASIC12.7□□□□□ -0.38
APCP25054 TNNI2-203ENST00000381906 745 ntAPPRIS P3 TSL 3 BASIC12.7□□□□□ -0.38
APCP25054 TNNI2-204ENST00000381911 743 ntAPPRIS P3 TSL 2 BASIC12.7□□□□□ -0.38
APCP25054 Z69890.1-201ENST00000382990 339 ntBASIC12.7□□□□□ -0.38
APCP25054 MRPL23-204ENST00000397297 613 ntTSL 2 BASIC12.7□□□□□ -0.38
APCP25054 RBM14-204ENST00000409738 372 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
APCP25054 XG-202ENST00000419513 979 ntAPPRIS ALT2 TSL 1 (best) BASIC12.7□□□□□ -0.38
APCP25054 HDAC2-AS2-203ENST00000436876 591 ntTSL 5 BASIC12.7□□□□□ -0.38
APCP25054 AL049833.2-202ENST00000556773 626 ntTSL 3 BASIC12.7□□□□□ -0.38
APCP25054 AC021016.3-201ENST00000608367 477 ntBASIC12.7□□□□□ -0.38
APCP25054 ASAH1-223ENST00000636171 2283 ntTSL 5 BASIC12.7□□□□□ -0.38
APCP25054 ATP6AP2-213ENST00000636251 1877 ntAPPRIS ALT2 TSL 5 BASIC12.7□□□□□ -0.38
APCP25054 USP4-203ENST00000415188 1454 ntTSL 3 BASIC12.7□□□□□ -0.38
APCP25054 CRK-202ENST00000398970 3675 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
APCP25054 LINC00334-203ENST00000638500 1377 ntTSL 5 BASIC12.7□□□□□ -0.38
APCP25054 GNB2-202ENST00000393924 1524 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
APCP25054 TMEM184C-204ENST00000508208 1528 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
APCP25054 PFKP-202ENST00000381075 2769 ntTSL 2 BASIC12.7□□□□□ -0.38
APCP25054 XKRX-202ENST00000468904 2249 ntTSL 2 BASIC12.7□□□□□ -0.38
APCP25054 PHYH-203ENST00000396920 1829 ntTSL 5 BASIC12.7□□□□□ -0.38
APCP25054 EWSR1-204ENST00000333395 1265 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
APCP25054 HNRNPA1P58-201ENST00000403629 610 ntBASIC12.7□□□□□ -0.38
APCP25054 HLA-K-203ENST00000430151 1046 ntBASIC12.7□□□□□ -0.38
APCP25054 DUTP3-201ENST00000450025 415 ntBASIC12.7□□□□□ -0.38
APCP25054 Z99943.1-201ENST00000451545 718 ntTSL 3 BASIC12.7□□□□□ -0.38
APCP25054 AC012507.1-201ENST00000454890 600 ntTSL 4 BASIC12.7□□□□□ -0.38
APCP25054 AC122719.1-201ENST00000507989 559 ntTSL 4 BASIC12.7□□□□□ -0.38
APCP25054 AC011603.1-201ENST00000553174 717 ntTSL 2 BASIC12.7□□□□□ -0.38
APCP25054 AF111169.2-201ENST00000553758 721 ntTSL 3 BASIC12.7□□□□□ -0.38
APCP25054 GLIS2-AS1-201ENST00000576080 340 ntTSL 2 BASIC12.7□□□□□ -0.38
APCP25054 SNHG15-205ENST00000580458 710 ntTSL 2 BASIC12.7□□□□□ -0.38
APCP25054 RN7SL470P-201ENST00000583069 259 ntBASIC12.7□□□□□ -0.38
APCP25054 AC009884.2-201ENST00000603110 324 ntBASIC12.7□□□□□ -0.38
APCP25054 HMGB1P24-201ENST00000611897 328 ntBASIC12.7□□□□□ -0.38
APCP25054 HOXB1-201ENST00000239174 2020 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
APCP25054 MAGEB2-201ENST00000378988 1610 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
APCP25054 NEURL4-203ENST00000570460 4890 ntAPPRIS ALT2 TSL 5 BASIC12.7□□□□□ -0.38
APCP25054 DCP1B-202ENST00000535873 2231 ntTSL 2 BASIC12.7□□□□□ -0.38
APCP25054 VHL-202ENST00000345392 2696 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
APCP25054 UIMC1-201ENST00000377227 2570 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
APCP25054 PKLR-202ENST00000392414 2479 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
APCP25054 NEIL2-204ENST00000455213 2323 ntAPPRIS P1 TSL 5 BASIC12.7□□□□□ -0.38
APCP25054 MIER1-205ENST00000371014 1728 ntTSL 2 BASIC12.7□□□□□ -0.38
APCP25054 NSD3-201ENST00000316985 3995 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
APCP25054 LIMS1-206ENST00000414829 439 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
APCP25054 AC012441.2-201ENST00000444843 739 ntBASIC12.7□□□□□ -0.38
APCP25054 LIMS3-205ENST00000487150 782 ntTSL 3 BASIC12.7□□□□□ -0.38
APCP25054 AC093909.3-201ENST00000504783 336 ntBASIC12.7□□□□□ -0.38
APCP25054 LINC02062-201ENST00000513175 478 ntTSL 3 BASIC12.7□□□□□ -0.38
APCP25054 AF111169.4-201ENST00000556368 749 ntTSL 2 BASIC12.7□□□□□ -0.38
APCP25054 POLR2E-204ENST00000586746 1096 ntAPPRIS P1 TSL 3 BASIC12.7□□□□□ -0.38
APCP25054 SMIM22-211ENST00000615889 1047 ntAPPRIS P4 TSL 5 BASIC12.7□□□□□ -0.38
APCP25054 CR392039.1-201ENST00000623217 204 ntBASIC12.7□□□□□ -0.38
APCP25054 MAPK9-203ENST00000393360 4326 ntTSL 5 BASIC12.7□□□□□ -0.38
APCP25054 SMARCD1-201ENST00000381513 3237 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
APCP25054 FH-201ENST00000366560 1797 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
APCP25054 LINC00513-201ENST00000447430 1616 ntTSL 5 BASIC12.7□□□□□ -0.38
APCP25054 PSTPIP1-207ENST00000559295 1349 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
APCP25054 AC020763.4-201ENST00000623414 4170 ntBASIC12.69□□□□□ -0.38
APCP25054 CPXM2-204ENST00000615851 2512 ntTSL 5 BASIC12.69□□□□□ -0.38
APCP25054 HSD17B6-206ENST00000555159 1525 ntAPPRIS P1 TSL 5 BASIC12.69□□□□□ -0.38
APCP25054 NSMF-204ENST00000371473 3556 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Retrieved 100 of 98,524 protein–RNA pairs in 48.3 ms