Protein–RNA interactions for Protein: P21359

NF1, Neurofibromin, humanhuman

Predictions only

Length 2,839 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NF1P21359 LRP5-201ENST00000294304 5159 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
NF1P21359 ZGLP1-202ENST00000403903 2303 ntAPPRIS P2 TSL 1 (best) BASIC12.37□□□□□ -0.43
NF1P21359 ACBD3-201ENST00000366812 3573 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
NF1P21359 RCL1-204ENST00000381750 2134 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
NF1P21359 NAIF1-201ENST00000373078 3399 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
NF1P21359 EVA1A-202ENST00000393913 1802 ntAPPRIS P2 TSL 1 (best) BASIC12.37□□□□□ -0.43
NF1P21359 CD276-213ENST00000561213 2690 ntAPPRIS ALT2 TSL 2 BASIC12.37□□□□□ -0.43
NF1P21359 NIPA2-201ENST00000337451 3233 ntAPPRIS P1 TSL 5 BASIC12.37□□□□□ -0.43
NF1P21359 HRASLS5-206ENST00000540857 3032 ntAPPRIS ALT2 TSL 1 (best) BASIC12.37□□□□□ -0.43
NF1P21359 SAE1-202ENST00000392776 1851 ntTSL 3 BASIC12.37□□□□□ -0.43
NF1P21359 PRAL-201ENST00000624952 3286 ntBASIC12.37□□□□□ -0.43
NF1P21359 PDK1-203ENST00000410055 2990 ntAPPRIS P3 TSL 1 (best) BASIC12.37□□□□□ -0.43
NF1P21359 RELT-201ENST00000064780 3535 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
NF1P21359 RAPSN-202ENST00000352508 1452 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
NF1P21359 ZNF302-201ENST00000423823 2590 ntAPPRIS P3 TSL 1 (best) BASIC12.37□□□□□ -0.43
NF1P21359 PDE12-202ENST00000487257 3040 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
NF1P21359 TMSB10-201ENST00000233143 496 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
NF1P21359 MRPS28-201ENST00000276585 850 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
NF1P21359 SPATS1-202ENST00000323108 1107 ntAPPRIS P2 TSL 5 BASIC12.37□□□□□ -0.43
NF1P21359 MIR566-201ENST00000385187 94 ntBASIC12.37□□□□□ -0.43
NF1P21359 PRRC2B-207ENST00000458550 899 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
NF1P21359 KCNK16-205ENST00000507712 889 ntTSL 3 BASIC12.37□□□□□ -0.43
NF1P21359 AC090820.1-201ENST00000519722 591 ntBASIC12.37□□□□□ -0.43
NF1P21359 LSM1-203ENST00000520755 975 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
NF1P21359 AC007298.2-201ENST00000551849 862 ntTSL 3 BASIC12.37□□□□□ -0.43
NF1P21359 C17orf62-216ENST00000578919 841 ntAPPRIS P1 TSL 3 BASIC12.37□□□□□ -0.43
NF1P21359 AC093330.1-206ENST00000582546 812 ntTSL 3 BASIC12.37□□□□□ -0.43
NF1P21359 AC005324.6-201ENST00000587972 613 ntBASIC12.37□□□□□ -0.43
NF1P21359 PRSS16-201ENST00000230582 2716 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
NF1P21359 SEMA4C-201ENST00000305476 3545 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
NF1P21359 EPHX2-201ENST00000380476 2064 ntTSL 2 BASIC12.37□□□□□ -0.43
NF1P21359 SLC25A48-203ENST00000425402 2062 ntTSL 5 BASIC12.37□□□□□ -0.43
NF1P21359 WT1-209ENST00000530998 2421 ntTSL 2 BASIC12.37□□□□□ -0.43
NF1P21359 ATP6AP2-211ENST00000636196 1403 ntAPPRIS ALT2 TSL 5 BASIC12.36□□□□□ -0.43
NF1P21359 AC015909.3-201ENST00000572855 1794 ntBASIC12.36□□□□□ -0.43
NF1P21359 MEF2A-204ENST00000557785 2854 ntAPPRIS ALT1 TSL 5 BASIC12.36□□□□□ -0.43
NF1P21359 C5orf24-204ENST00000504727 2923 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
NF1P21359 WIF1-201ENST00000286574 2238 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
NF1P21359 CCL25-202ENST00000315626 450 ntTSL 2 BASIC12.36□□□□□ -0.43
NF1P21359 TNNT2-203ENST00000367315 1083 ntAPPRIS ALT2 TSL 5 BASIC12.36□□□□□ -0.43
NF1P21359 PHBP15-201ENST00000574228 665 ntBASIC12.36□□□□□ -0.43
NF1P21359 ZNF175-204ENST00000596504 580 ntTSL 2 BASIC12.36□□□□□ -0.43
NF1P21359 METTL17-221ENST00000556670 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC12.36□□□□□ -0.43
NF1P21359 MEIKIN-205ENST00000616644 1438 ntAPPRIS ALT2 TSL 5 BASIC12.36□□□□□ -0.43
NF1P21359 RNF32-202ENST00000317955 1682 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
NF1P21359 TNFAIP2-201ENST00000333007 4175 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
NF1P21359 AGGF1P2-201ENST00000426656 2106 ntBASIC12.36□□□□□ -0.43
NF1P21359 GLMP-214ENST00000614643 1851 ntAPPRIS ALT2 TSL 2 BASIC12.36□□□□□ -0.43
NF1P21359 AC148477.4-201ENST00000613430 1793 ntBASIC12.36□□□□□ -0.43
NF1P21359 MLPH-204ENST00000410032 2171 ntAPPRIS ALT2 TSL 2 BASIC12.36□□□□□ -0.43
NF1P21359 MRPL55-214ENST00000366741 603 ntAPPRIS P1 TSL 2 BASIC12.36□□□□□ -0.43
NF1P21359 MRPL55-218ENST00000366747 603 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
NF1P21359 HIST2H2BA-201ENST00000412169 381 ntBASIC12.36□□□□□ -0.43
NF1P21359 AC023906.1-201ENST00000486386 453 ntBASIC12.36□□□□□ -0.43
NF1P21359 CTBP2P6-201ENST00000526402 1229 ntBASIC12.36□□□□□ -0.43
NF1P21359 TPD52L1-208ENST00000528193 789 ntTSL 5 BASIC12.36□□□□□ -0.43
NF1P21359 LTBR-209ENST00000541102 1084 ntTSL 5 BASIC12.36□□□□□ -0.43
NF1P21359 GFER-204ENST00000567719 483 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
NF1P21359 PTOV1-AS2-203ENST00000601893 719 ntTSL 4 BASIC12.36□□□□□ -0.43
NF1P21359 AC079325.2-202ENST00000641031 462 ntAPPRIS ALT2 BASIC12.36□□□□□ -0.43
NF1P21359 AC079325.2-201ENST00000641710 606 ntAPPRIS P5 BASIC12.36□□□□□ -0.43
NF1P21359 SH2B1-203ENST00000359285 3033 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
NF1P21359 BMP1-201ENST00000306349 2626 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
NF1P21359 PLEKHA4-202ENST00000355496 2614 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
NF1P21359 HNRNPK-204ENST00000376263 2942 ntAPPRIS P4 TSL 1 (best) BASIC12.36□□□□□ -0.43
NF1P21359 SLC5A2-201ENST00000330498 2271 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
NF1P21359 BMP2K-201ENST00000335016 3804 ntAPPRIS ALT2 TSL 5 BASIC12.36□□□□□ -0.43
NF1P21359 JMJD4-201ENST00000366758 2595 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
NF1P21359 SEPT9-202ENST00000423034 3984 ntAPPRIS ALT1 TSL 1 (best) BASIC12.36□□□□□ -0.43
NF1P21359 ONECUT1-201ENST00000305901 2092 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
NF1P21359 C6orf106-202ENST00000374023 4418 ntAPPRIS P4 TSL 1 (best) BASIC12.35□□□□□ -0.43
NF1P21359 SLC7A2-205ENST00000522656 2274 ntAPPRIS ALT1 TSL 1 (best) BASIC12.35□□□□□ -0.43
NF1P21359 IGHV3-53-201ENST00000390627 571 ntAPPRIS P1 BASIC12.35□□□□□ -0.43
NF1P21359 RPS9-204ENST00000391753 709 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
NF1P21359 Z95624.1-201ENST00000413528 628 ntTSL 5 BASIC12.35□□□□□ -0.43
NF1P21359 ADIRF-AS1-201ENST00000418273 2627 ntTSL 3 BASIC12.35□□□□□ -0.43
NF1P21359 AL512330.1-201ENST00000456701 349 ntTSL 3 BASIC12.35□□□□□ -0.43
NF1P21359 AC126696.1-201ENST00000561567 756 ntTSL 3 BASIC12.35□□□□□ -0.43
NF1P21359 AC136944.4-201ENST00000568893 660 ntTSL 4 BASIC12.35□□□□□ -0.43
NF1P21359 AC234782.2-201ENST00000614615 1240 ntTSL 2 BASIC12.35□□□□□ -0.43
NF1P21359 PCDHGC3-204ENST00000617222 731 ntTSL 3 BASIC12.35□□□□□ -0.43
NF1P21359 AC011471.3-201ENST00000623576 402 ntBASIC12.35□□□□□ -0.43
NF1P21359 MBD3L2B-201ENST00000636986 860 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
NF1P21359 ELAVL1-205ENST00000596459 1473 ntAPPRIS P1 TSL 2 BASIC12.35□□□□□ -0.43
NF1P21359 EPB41-205ENST00000373797 2402 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
NF1P21359 PDLIM5-202ENST00000318007 1960 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
NF1P21359 KIAA1586-201ENST00000370733 2933 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
NF1P21359 SALL3-206ENST00000616649 2958 ntTSL 5 BASIC12.35□□□□□ -0.43
NF1P21359 STYXL1-201ENST00000248600 1415 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
NF1P21359 MYLK3-202ENST00000536476 1795 ntAPPRIS ALT2 TSL 2 BASIC12.35□□□□□ -0.43
NF1P21359 TCF4-201ENST00000354452 3482 ntAPPRIS ALT1 TSL 5 BASIC12.35□□□□□ -0.43
NF1P21359 PRIMA1-201ENST00000316227 1080 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
NF1P21359 XPNPEP2-201ENST00000371105 912 ntTSL 2 BASIC12.35□□□□□ -0.43
NF1P21359 MAGOH-202ENST00000371470 756 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
NF1P21359 KCNQ1DN-201ENST00000441418 1093 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
NF1P21359 AC015689.1-201ENST00000525365 462 ntTSL 2 BASIC12.35□□□□□ -0.43
NF1P21359 UBE3B-206ENST00000536398 1120 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
NF1P21359 LINC02440-201ENST00000545276 680 ntTSL 2 BASIC12.35□□□□□ -0.43
NF1P21359 LINC01224-201ENST00000593573 798 ntTSL 4 BASIC12.35□□□□□ -0.43
NF1P21359 AC010335.1-201ENST00000594590 599 ntTSL 3 BASIC12.35□□□□□ -0.43
Retrieved 100 of 98,524 protein–RNA pairs in 33.6 ms