Protein–RNA interactions for Protein: P20338

RAB4A, Ras-related protein Rab-4A, humanhuman

Predictions only

Length 218 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB4AP20338 AC106782.2-201ENST00000563252 992 ntTSL 3 BASIC12.04□□□□□ -0.48
RAB4AP20338 LAT-211ENST00000566177 786 ntAPPRIS ALT2 TSL 1 (best) BASIC12.04□□□□□ -0.48
RAB4AP20338 C17orf62-221ENST00000581196 668 ntTSL 4 BASIC12.04□□□□□ -0.48
RAB4AP20338 AC011467.2-201ENST00000598425 242 ntBASIC12.04□□□□□ -0.48
RAB4AP20338 TARDBP-228ENST00000629725 1031 ntTSL 5 BASIC12.04□□□□□ -0.48
RAB4AP20338 AC011899.2-202ENST00000438047 4302 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
RAB4AP20338 GMPR-201ENST00000259727 1515 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
RAB4AP20338 USF2-202ENST00000343550 1523 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
RAB4AP20338 ZW10-201ENST00000200135 2992 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
RAB4AP20338 GMCL1-201ENST00000282570 4191 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
RAB4AP20338 RBL1-201ENST00000344359 3225 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
RAB4AP20338 ENO2-211ENST00000541477 2549 ntAPPRIS P1 TSL 2 BASIC12.04□□□□□ -0.48
RAB4AP20338 TSPAN32-201ENST00000182290 1318 ntAPPRIS P2 TSL 1 (best) BASIC12.04□□□□□ -0.48
RAB4AP20338 TSPAN32-217ENST00000612299 1301 ntTSL 5 BASIC12.04□□□□□ -0.48
RAB4AP20338 CFAP45-201ENST00000368099 1842 ntAPPRIS P2 TSL 1 (best) BASIC12.04□□□□□ -0.48
RAB4AP20338 ALOX15B-205ENST00000573359 1809 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
RAB4AP20338 NR3C1-201ENST00000231509 3556 ntAPPRIS ALT1 TSL 1 (best) BASIC12.04□□□□□ -0.48
RAB4AP20338 GLB1L3-201ENST00000389887 3566 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
RAB4AP20338 ESYT3-201ENST00000289135 1356 ntTSL 5 BASIC12.04□□□□□ -0.48
RAB4AP20338 ACADM-202ENST00000370841 2619 ntAPPRIS P3 TSL 1 (best) BASIC12.04□□□□□ -0.48
RAB4AP20338 SRPX-201ENST00000378533 1874 ntAPPRIS P3 TSL 1 (best) BASIC12.04□□□□□ -0.48
RAB4AP20338 TOP3BP1-201ENST00000420768 1380 ntBASIC12.04□□□□□ -0.48
RAB4AP20338 NR4A2-209ENST00000426264 2642 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
RAB4AP20338 AL512625.3-203ENST00000445604 1602 ntTSL 5 BASIC12.04□□□□□ -0.48
RAB4AP20338 LOX-206ENST00000639739 1626 ntTSL 5 BASIC12.04□□□□□ -0.48
RAB4AP20338 PDK2-201ENST00000007708 2384 ntTSL 2 BASIC12.04□□□□□ -0.48
RAB4AP20338 TDRD5-204ENST00000444136 3946 ntAPPRIS ALT1 TSL 1 (best) BASIC12.04□□□□□ -0.48
RAB4AP20338 GALNT14-201ENST00000324589 2169 ntTSL 2 BASIC12.03□□□□□ -0.48
RAB4AP20338 C15orf39-207ENST00000567617 4249 ntAPPRIS ALT2 TSL 1 (best) BASIC12.03□□□□□ -0.48
RAB4AP20338 RPRD1A-209ENST00000590898 1945 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
RAB4AP20338 JMJD7-201ENST00000397299 1416 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
RAB4AP20338 ZFP1-208ENST00000568079 1426 ntTSL 2 BASIC12.03□□□□□ -0.48
RAB4AP20338 AP001189.5-201ENST00000637683 1413 ntTSL 5 BASIC12.03□□□□□ -0.48
RAB4AP20338 AP4B1-201ENST00000256658 2742 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
RAB4AP20338 LAPTM5-201ENST00000294507 2223 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
RAB4AP20338 FGFR1-201ENST00000326324 3816 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
RAB4AP20338 FGFR1-204ENST00000356207 3824 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
RAB4AP20338 CACNA1G-218ENST00000507510 7014 ntAPPRIS ALT2 TSL 1 (best) BASIC12.03□□□□□ -0.48
RAB4AP20338 MMADHC-203ENST00000428879 1726 ntAPPRIS P1 TSL 2 BASIC12.03□□□□□ -0.48
RAB4AP20338 BX324167.2-201ENST00000623717 3316 ntBASIC12.03□□□□□ -0.48
RAB4AP20338 OR2I1P-208ENST00000641137 4948 ntBASIC12.03□□□□□ -0.48
RAB4AP20338 DHRS1-201ENST00000288111 1480 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
RAB4AP20338 TMPO-202ENST00000266732 3615 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
RAB4AP20338 TFAP2A-201ENST00000319516 2035 ntTSL 5 BASIC12.03□□□□□ -0.48
RAB4AP20338 THOC5-202ENST00000397871 2560 ntAPPRIS P1 TSL 5 BASIC12.03□□□□□ -0.48
RAB4AP20338 SH2D3C-201ENST00000314830 3124 ntAPPRIS P4 TSL 1 (best) BASIC12.03□□□□□ -0.48
RAB4AP20338 RANBP3-201ENST00000034275 1762 ntAPPRIS ALT2 TSL 1 (best) BASIC12.03□□□□□ -0.48
RAB4AP20338 B3GNT7-201ENST00000287590 3706 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
RAB4AP20338 IGHG1-202ENST00000390548 2619 ntAPPRIS P5 BASIC12.03□□□□□ -0.48
RAB4AP20338 LBH-201ENST00000395323 2933 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
RAB4AP20338 POMZP3-201ENST00000275569 1259 ntTSL 2 BASIC12.03□□□□□ -0.48
RAB4AP20338 UXT-202ENST00000335890 701 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
RAB4AP20338 TSTD1-202ENST00000368023 574 ntAPPRIS ALT2 TSL 2 BASIC12.03□□□□□ -0.48
RAB4AP20338 STK40-202ENST00000373129 3846 ntAPPRIS P3 TSL 1 (best) BASIC12.03□□□□□ -0.48
RAB4AP20338 TSPO2-202ENST00000373161 958 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
RAB4AP20338 GGT1-205ENST00000403838 1033 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
RAB4AP20338 GGT1-207ENST00000404532 853 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
RAB4AP20338 AL357874.1-201ENST00000428948 574 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
RAB4AP20338 RPAP3-203ENST00000432584 2133 ntTSL 2 BASIC12.03□□□□□ -0.48
RAB4AP20338 AC112907.2-201ENST00000448639 330 ntBASIC12.03□□□□□ -0.48
RAB4AP20338 MDH2-205ENST00000461263 648 ntTSL 2 BASIC12.03□□□□□ -0.48
RAB4AP20338 TSPO2-203ENST00000470917 699 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
RAB4AP20338 LINC00882-201ENST00000473636 710 ntTSL 3 BASIC12.03□□□□□ -0.48
RAB4AP20338 YBX1P2-201ENST00000489612 999 ntBASIC12.03□□□□□ -0.48
RAB4AP20338 AC009185.1-201ENST00000517634 911 ntTSL 3 BASIC12.03□□□□□ -0.48
RAB4AP20338 ABHD14B-208ENST00000525795 980 ntAPPRIS P1 TSL 3 BASIC12.03□□□□□ -0.48
RAB4AP20338 NUBP2-206ENST00000565134 815 ntTSL 5 BASIC12.03□□□□□ -0.48
RAB4AP20338 AC011498.2-201ENST00000588798 540 ntTSL 3 BASIC12.03□□□□□ -0.48
RAB4AP20338 NEK5-204ENST00000617045 2127 ntAPPRIS P1 TSL 2 BASIC12.03□□□□□ -0.48
RAB4AP20338 SCAMP4-213ENST00000621748 1172 ntAPPRIS P1 TSL 5 BASIC12.03□□□□□ -0.48
RAB4AP20338 HADH-212ENST00000638621 741 ntTSL 5 BASIC12.03□□□□□ -0.48
RAB4AP20338 ARHGAP10-201ENST00000336498 3299 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
RAB4AP20338 C15orf39-202ENST00000394987 4430 ntAPPRIS P2 TSL 1 (best) BASIC12.03□□□□□ -0.48
RAB4AP20338 PPP6R2-203ENST00000395741 3304 ntAPPRIS ALT2 TSL 1 (best) BASIC12.03□□□□□ -0.48
RAB4AP20338 KLHL34-201ENST00000379499 3641 ntAPPRIS P1 BASIC12.03□□□□□ -0.48
RAB4AP20338 GRIN1-203ENST00000371550 3940 ntTSL 5 BASIC12.03□□□□□ -0.48
RAB4AP20338 NUTM2HP-201ENST00000442076 2498 ntBASIC12.03□□□□□ -0.48
RAB4AP20338 AC091951.1-201ENST00000512854 2465 ntBASIC12.03□□□□□ -0.48
RAB4AP20338 SCOC-210ENST00000608372 5129 ntAPPRIS P2 TSL 1 (best) BASIC12.03□□□□□ -0.48
RAB4AP20338 ACP2-201ENST00000256997 2203 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
RAB4AP20338 CORO7-222ENST00000574025 2826 ntTSL 2 BASIC12.03□□□□□ -0.48
RAB4AP20338 SCUBE2-201ENST00000309263 3727 ntTSL 5 BASIC12.03□□□□□ -0.48
RAB4AP20338 NQO2-205ENST00000380455 10084 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
RAB4AP20338 PAX3-206ENST00000392070 2258 ntAPPRIS P4 TSL 1 (best) BASIC12.03□□□□□ -0.48
RAB4AP20338 C14orf93-207ENST00000397382 1986 ntAPPRIS P1 TSL 5 BASIC12.03□□□□□ -0.48
RAB4AP20338 PHYHIP-202ENST00000454243 3200 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
RAB4AP20338 OR2V1-205ENST00000642036 2609 ntAPPRIS P1 BASIC12.03□□□□□ -0.48
RAB4AP20338 NFAT5-209ENST00000567239 6376 ntAPPRIS ALT1 TSL 1 (best) BASIC12.03□□□□□ -0.48
RAB4AP20338 ADCY7-201ENST00000254235 6138 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
RAB4AP20338 MFNG-201ENST00000356998 2088 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.48
RAB4AP20338 RABGEF1-210ENST00000437078 4319 ntAPPRIS P1 TSL 5 BASIC12.02□□□□□ -0.48
RAB4AP20338 AKAP13-201ENST00000361243 9468 ntAPPRIS P4 TSL 1 (best) BASIC12.02□□□□□ -0.48
RAB4AP20338 ARGLU1-203ENST00000400198 3390 ntTSL 1 (best) BASIC12.02□□□□□ -0.48
RAB4AP20338 GPAA1P2-202ENST00000606848 1787 ntBASIC12.02□□□□□ -0.48
RAB4AP20338 EPHX1-206ENST00000614058 1789 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.48
RAB4AP20338 DNAJB12-201ENST00000338820 4360 ntTSL 2 BASIC12.02□□□□□ -0.48
RAB4AP20338 LCA5-202ENST00000392959 4719 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.48
RAB4AP20338 CLDND1-222ENST00000510545 2124 ntAPPRIS P1 TSL 5 BASIC12.02□□□□□ -0.48
RAB4AP20338 PPP1R13L-202ENST00000418234 3118 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.48
RAB4AP20338 CEP70-213ENST00000489254 1811 ntAPPRIS ALT2 TSL 2 BASIC12.02□□□□□ -0.48
Retrieved 100 of 98,524 protein–RNA pairs in 34.1 ms