Protein–RNA interactions for Protein: P12107

COL11A1, Collagen alpha-1(XI) chain, humanhuman

Predicted RBP Predictions only

Length 1,806 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL11A1P12107 SLC18A1-207ENST00000519026 1980 ntTSL 5 BASIC17.31■□□□□ 0.36
COL11A1P12107 GTF2A2-205ENST00000396064 633 ntTSL 3 BASIC17.31■□□□□ 0.36
COL11A1P12107 AC007274.2-201ENST00000421675 662 ntBASIC17.31■□□□□ 0.36
COL11A1P12107 FNTAP2-201ENST00000430308 634 ntBASIC17.31■□□□□ 0.36
COL11A1P12107 FOXP4-AS1-203ENST00000439386 404 ntTSL 3 BASIC17.31■□□□□ 0.36
COL11A1P12107 ATP6V1G2-210ENST00000483251 662 ntTSL 3 BASIC17.31■□□□□ 0.36
COL11A1P12107 GTF2A2-208ENST00000484743 408 ntTSL 2 BASIC17.31■□□□□ 0.36
COL11A1P12107 MARK2P5-201ENST00000507649 634 ntBASIC17.31■□□□□ 0.36
COL11A1P12107 RCE1-204ENST00000525356 1270 ntTSL 5 BASIC17.31■□□□□ 0.36
COL11A1P12107 AC068587.8-201ENST00000641239 219 ntBASIC17.31■□□□□ 0.36
COL11A1P12107 TMBIM1-201ENST00000258412 2371 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
COL11A1P12107 CHRNA5-201ENST00000299565 3623 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
COL11A1P12107 RCHY1-202ENST00000380840 1735 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
COL11A1P12107 RNF183-201ENST00000297894 1830 ntAPPRIS P1 TSL 2 BASIC17.3■□□□□ 0.36
COL11A1P12107 AATBC-203ENST00000448247 1889 ntTSL 2 BASIC17.3■□□□□ 0.36
COL11A1P12107 AL359915.2-205ENST00000418015 1529 ntTSL 2 BASIC17.3■□□□□ 0.36
COL11A1P12107 NFIX-208ENST00000587260 1537 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
COL11A1P12107 TMCO5B-204ENST00000529696 1568 ntTSL 2 BASIC17.3■□□□□ 0.36
COL11A1P12107 RNPS1-220ENST00000566458 2037 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
COL11A1P12107 KYAT1-202ENST00000320665 1623 ntTSL 2 BASIC17.3■□□□□ 0.36
COL11A1P12107 SEMA4F-201ENST00000339773 2177 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
COL11A1P12107 AC136759.1-203ENST00000527477 2196 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
COL11A1P12107 ZNF764-201ENST00000252797 2738 ntAPPRIS P3 TSL 1 (best) BASIC17.3■□□□□ 0.36
COL11A1P12107 CACFD1-207ENST00000542192 2754 ntTSL 2 BASIC17.3■□□□□ 0.36
COL11A1P12107 IFITM5-201ENST00000382614 736 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
COL11A1P12107 SERF2-209ENST00000409646 559 ntTSL 4 BASIC17.3■□□□□ 0.36
COL11A1P12107 HLA-DPB2-205ENST00000435074 1188 ntBASIC17.3■□□□□ 0.36
COL11A1P12107 CENPBD1P1-203ENST00000479047 569 ntTSL 3 BASIC17.3■□□□□ 0.36
COL11A1P12107 CARHSP1-203ENST00000561530 729 ntAPPRIS P1 TSL 3 BASIC17.3■□□□□ 0.36
COL11A1P12107 GEMIN7-204ENST00000591747 576 ntAPPRIS P1 TSL 5 BASIC17.3■□□□□ 0.36
COL11A1P12107 KLK3-207ENST00000595952 969 ntTSL 3 BASIC17.3■□□□□ 0.36
COL11A1P12107 AC106872.11-201ENST00000605838 421 ntBASIC17.3■□□□□ 0.36
COL11A1P12107 Z98259.2-201ENST00000641583 609 ntBASIC17.3■□□□□ 0.36
COL11A1P12107 USP36-203ENST00000542802 6063 ntAPPRIS P2 TSL 1 (best) BASIC17.3■□□□□ 0.36
COL11A1P12107 NRXN2-202ENST00000301894 3535 ntTSL 5 BASIC17.3■□□□□ 0.36
COL11A1P12107 C7orf33-201ENST00000307003 1354 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
COL11A1P12107 ZBTB47-202ENST00000505904 2456 ntTSL 5 BASIC17.3■□□□□ 0.36
COL11A1P12107 DPP9-210ENST00000597849 2025 ntTSL 5 BASIC17.3■□□□□ 0.36
COL11A1P12107 RTN1-209ENST00000611068 2647 ntTSL 5 BASIC17.3■□□□□ 0.36
COL11A1P12107 ACTA1-202ENST00000366684 1491 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
COL11A1P12107 RPP40-202ENST00000380051 1483 ntAPPRIS P1 TSL 5 BASIC17.3■□□□□ 0.36
COL11A1P12107 ALPL-207ENST00000540617 2131 ntAPPRIS ALT2 TSL 2 BASIC17.3■□□□□ 0.36
COL11A1P12107 TSR1-201ENST00000301364 5188 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
COL11A1P12107 SLC25A45-214ENST00000534028 2432 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
COL11A1P12107 EXT2-210ENST00000533608 3136 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
COL11A1P12107 SLC6A2-209ENST00000568943 2471 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
COL11A1P12107 FYN-205ENST00000368682 3234 ntAPPRIS ALT1 TSL 5 BASIC17.29■□□□□ 0.36
COL11A1P12107 PRAL-201ENST00000624952 3286 ntBASIC17.29■□□□□ 0.36
COL11A1P12107 FGFR3-202ENST00000340107 4293 ntAPPRIS ALT2 TSL 5 BASIC17.29■□□□□ 0.36
COL11A1P12107 HIST2H2AA3-201ENST00000369159 549 ntAPPRIS P1 BASIC17.29■□□□□ 0.36
COL11A1P12107 MAATS1-203ENST00000463700 939 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
COL11A1P12107 AC097103.2-206ENST00000514729 588 ntTSL 4 BASIC17.29■□□□□ 0.36
COL11A1P12107 AL136309.4-201ENST00000527831 640 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
COL11A1P12107 AC015660.1-201ENST00000560103 395 ntTSL 3 BASIC17.29■□□□□ 0.36
COL11A1P12107 HIST2H2AA4-201ENST00000607355 564 ntAPPRIS P1 BASIC17.29■□□□□ 0.36
COL11A1P12107 AF254983.2-201ENST00000612331 135 ntBASIC17.29■□□□□ 0.36
COL11A1P12107 MEF2C-227ENST00000626391 1182 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
COL11A1P12107 MEF2C-231ENST00000628656 1254 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
COL11A1P12107 DGKI-203ENST00000446122 4070 ntAPPRIS ALT2 TSL 5 BASIC17.29■□□□□ 0.36
COL11A1P12107 FUT7-201ENST00000314412 2584 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
COL11A1P12107 SHANK1-203ENST00000391813 4785 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
COL11A1P12107 TK1-201ENST00000301634 1628 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
COL11A1P12107 AP4M1-205ENST00000422582 1814 ntTSL 2 BASIC17.29■□□□□ 0.36
COL11A1P12107 CNN1-210ENST00000592923 1848 ntTSL 2 BASIC17.29■□□□□ 0.36
COL11A1P12107 MLF1-216ENST00000618075 2116 ntTSL 5 BASIC17.29■□□□□ 0.36
COL11A1P12107 EXD3-201ENST00000340951 2872 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
COL11A1P12107 ARHGAP5-203ENST00000396582 5786 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
COL11A1P12107 C19orf68-203ENST00000614654 3588 ntAPPRIS P2 TSL 5 BASIC17.28■□□□□ 0.36
COL11A1P12107 NFU1-201ENST00000303698 1034 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
COL11A1P12107 MRPS12-201ENST00000308018 1207 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
COL11A1P12107 TPRKB-202ENST00000318190 819 ntTSL 5 BASIC17.28■□□□□ 0.36
COL11A1P12107 CSH2-203ENST00000392886 920 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
COL11A1P12107 SUMO1-204ENST00000409181 784 ntTSL 3 BASIC17.28■□□□□ 0.36
COL11A1P12107 SUMO1-207ENST00000409498 779 ntTSL 3 BASIC17.28■□□□□ 0.36
COL11A1P12107 AC010141.1-201ENST00000411585 623 ntBASIC17.28■□□□□ 0.36
COL11A1P12107 PDIA3P2-201ENST00000428073 158 ntBASIC17.28■□□□□ 0.36
COL11A1P12107 AL589986.1-201ENST00000429230 789 ntTSL 5 BASIC17.28■□□□□ 0.36
COL11A1P12107 BANF1-202ENST00000445560 946 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
COL11A1P12107 PABPC5-AS1-201ENST00000456187 426 ntTSL 5 BASIC17.28■□□□□ 0.36
COL11A1P12107 IMP3P2-201ENST00000489760 475 ntBASIC17.28■□□□□ 0.36
COL11A1P12107 NUP210P1-202ENST00000504322 710 ntBASIC17.28■□□□□ 0.36
COL11A1P12107 CSH2-206ENST00000560142 749 ntTSL 5 BASIC17.28■□□□□ 0.36
COL11A1P12107 AP007216.2-201ENST00000562094 299 ntTSL 3 BASIC17.28■□□□□ 0.36
COL11A1P12107 SELENOW-204ENST00000595615 535 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
COL11A1P12107 SELENOW-216ENST00000612212 875 ntTSL 5 BASIC17.28■□□□□ 0.36
COL11A1P12107 LINC01669-205ENST00000624561 713 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
COL11A1P12107 DUSP13-208ENST00000478873 1335 ntTSL 5 BASIC17.28■□□□□ 0.36
COL11A1P12107 SHC1P1-201ENST00000425230 1745 ntBASIC17.28■□□□□ 0.36
COL11A1P12107 ATP6AP2-213ENST00000636251 1877 ntAPPRIS ALT2 TSL 5 BASIC17.28■□□□□ 0.36
COL11A1P12107 ACTL6A-202ENST00000429709 1901 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
COL11A1P12107 FOXP3-202ENST00000376199 2274 ntTSL 2 BASIC17.28■□□□□ 0.36
COL11A1P12107 NRCAM-217ENST00000613830 3025 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
COL11A1P12107 CAMK2D-211ENST00000511664 2210 ntTSL 2 BASIC17.28■□□□□ 0.36
COL11A1P12107 GNG2-213ENST00000556766 2125 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
COL11A1P12107 SLC39A14-201ENST00000240095 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
COL11A1P12107 ARFIP1-204ENST00000429148 1599 ntTSL 2 BASIC17.28■□□□□ 0.36
COL11A1P12107 EHF-212ENST00000533754 1501 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
COL11A1P12107 HSD17B6-206ENST00000555159 1525 ntAPPRIS P1 TSL 5 BASIC17.28■□□□□ 0.36
COL11A1P12107 PPP1CA-201ENST00000312989 1389 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
COL11A1P12107 UBXN11-207ENST00000374223 1312 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
Retrieved 100 of 98,524 protein–RNA pairs in 63.6 ms