Protein–RNA interactions for Protein: P10827

THRA, Thyroid hormone receptor alpha, humanhuman

Predictions only

Length 490 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
THRAP10827 TSNARE1-201ENST00000307180 1907 ntAPPRIS ALT2 TSL 5 BASIC15.7■□□□□ 0.1
THRAP10827 ELOA-204ENST00000613537 4924 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
THRAP10827 UBE2D1-204ENST00000615793 2621 ntTSL 2 BASIC15.7■□□□□ 0.1
THRAP10827 MLPH-203ENST00000409373 2031 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
THRAP10827 SLC8B1-201ENST00000202831 2975 ntAPPRIS P1 TSL 5 BASIC15.7■□□□□ 0.1
THRAP10827 DTD2-202ENST00000356180 1400 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
THRAP10827 TMEM120A-201ENST00000417509 1444 ntTSL 2 BASIC15.7■□□□□ 0.1
THRAP10827 PIP4K2A-206ENST00000545335 1436 ntTSL 2 BASIC15.7■□□□□ 0.1
THRAP10827 KREMEN1-201ENST00000327813 2719 ntAPPRIS P3 TSL 2 BASIC15.7■□□□□ 0.1
THRAP10827 CICP24-201ENST00000605464 2705 ntBASIC15.7■□□□□ 0.1
THRAP10827 SIGLEC11-202ENST00000426971 2479 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
THRAP10827 ETV5-206ENST00000434744 2213 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
THRAP10827 NISCH-202ENST00000420808 2589 ntAPPRIS ALT2 TSL 5 BASIC15.7■□□□□ 0.1
THRAP10827 LINGO1-204ENST00000561030 2677 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
THRAP10827 AC005264.1-201ENST00000587587 2319 ntTSL 2 BASIC15.7■□□□□ 0.1
THRAP10827 STAMBPL1-204ENST00000371927 4184 ntTSL 2 BASIC15.7■□□□□ 0.1
THRAP10827 NME3-201ENST00000219302 1069 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
THRAP10827 LST1-202ENST00000303757 604 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
THRAP10827 OR52W1-201ENST00000311352 1114 ntAPPRIS P1 BASIC15.7■□□□□ 0.1
THRAP10827 AC073349.1-201ENST00000340779 1062 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
THRAP10827 EDF1-203ENST00000371649 790 ntTSL 2 BASIC15.7■□□□□ 0.1
THRAP10827 C10orf35-201ENST00000373279 1065 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
THRAP10827 EFHD1-202ENST00000409613 1156 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
THRAP10827 SHBG-204ENST00000441599 973 ntAPPRIS ALT2 TSL 1 (best) BASIC15.7■□□□□ 0.1
THRAP10827 NECAP2-203ENST00000457722 935 ntTSL 2 BASIC15.7■□□□□ 0.1
THRAP10827 AC106772.1-201ENST00000506629 591 ntTSL 3 BASIC15.7■□□□□ 0.1
THRAP10827 AC138466.1-201ENST00000535242 391 ntTSL 3 BASIC15.7■□□□□ 0.1
THRAP10827 PSMD7-204ENST00000567958 692 ntTSL 3 BASIC15.7■□□□□ 0.1
THRAP10827 ELOF1-205ENST00000589171 743 ntTSL 3 BASIC15.7■□□□□ 0.1
THRAP10827 TPGS2-215ENST00000590842 1239 ntTSL 2 BASIC15.7■□□□□ 0.1
THRAP10827 AL844908.2-201ENST00000609461 460 ntBASIC15.7■□□□□ 0.1
THRAP10827 AC090164.4-201ENST00000632451 313 ntTSL 5 BASIC15.7■□□□□ 0.1
THRAP10827 MECR-202ENST00000373791 2416 ntTSL 2 BASIC15.7■□□□□ 0.1
THRAP10827 COL11A2-201ENST00000341947 6425 ntAPPRIS ALT2 TSL 5 BASIC15.7■□□□□ 0.1
THRAP10827 AP000704.1-201ENST00000637940 2182 ntTSL 5 BASIC15.7■□□□□ 0.1
THRAP10827 PKN1-202ENST00000342216 2960 ntTSL 2 BASIC15.7■□□□□ 0.1
THRAP10827 GRIN3A-201ENST00000361820 7770 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
THRAP10827 ICAM3-201ENST00000160262 1934 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
THRAP10827 CCDC183-AS1-201ENST00000414656 2386 ntTSL 2 BASIC15.7■□□□□ 0.1
THRAP10827 PLPP3-201ENST00000371250 3292 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
THRAP10827 PODN-202ENST00000371500 3287 ntAPPRIS ALT2 TSL 1 (best) BASIC15.7■□□□□ 0.1
THRAP10827 C4A-259ENST00000498271 5269 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
THRAP10827 OR2I1P-210ENST00000642037 4691 ntBASIC15.7■□□□□ 0.1
THRAP10827 USP35-203ENST00000529308 4216 ntAPPRIS P1 TSL 5 BASIC15.7■□□□□ 0.1
THRAP10827 AP1M2-207ENST00000590923 1757 ntAPPRIS ALT1 TSL 1 (best) BASIC15.7■□□□□ 0.1
THRAP10827 ISG20L2-202ENST00000368219 2310 ntAPPRIS P1 TSL 5 BASIC15.69■□□□□ 0.1
THRAP10827 SLC25A4-201ENST00000281456 4440 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
THRAP10827 AC063926.2-201ENST00000623766 1308 ntBASIC15.69■□□□□ 0.1
THRAP10827 LINC01101-201ENST00000622953 1884 ntBASIC15.69■□□□□ 0.1
THRAP10827 TUBB3-206ENST00000554444 1978 ntTSL 2 BASIC15.69■□□□□ 0.1
THRAP10827 MKS1-204ENST00000537529 2083 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
THRAP10827 ZSCAN10-209ENST00000576985 2739 ntAPPRIS P1 TSL 5 BASIC15.69■□□□□ 0.1
THRAP10827 SEC63-201ENST00000369002 6411 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
THRAP10827 MAPKAP1-201ENST00000265960 3395 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
THRAP10827 NFATC1-207ENST00000545796 3558 ntTSL 2 BASIC15.69■□□□□ 0.1
THRAP10827 KCNC2-208ENST00000549446 5625 ntAPPRIS P4 TSL 1 (best) BASIC15.69■□□□□ 0.1
THRAP10827 RRP1-207ENST00000497547 3022 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
THRAP10827 TK2-221ENST00000620035 5060 ntTSL 2 BASIC15.69■□□□□ 0.1
THRAP10827 PRDM6-201ENST00000407847 9267 ntAPPRIS P1 TSL 5 BASIC15.69■□□□□ 0.1
THRAP10827 C2orf68-202ENST00000409734 1722 ntTSL 2 BASIC15.69■□□□□ 0.1
THRAP10827 PMP22-209ENST00000612492 1822 ntAPPRIS P1 TSL 3 BASIC15.69■□□□□ 0.1
THRAP10827 PMS1-221ENST00000624204 3417 ntTSL 2 BASIC15.69■□□□□ 0.1
THRAP10827 SERPINA3-203ENST00000467132 2660 ntAPPRIS P1 TSL 2 BASIC15.69■□□□□ 0.1
THRAP10827 SGK2-206ENST00000423407 1915 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
THRAP10827 CHL1-202ENST00000397491 5235 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
THRAP10827 LINC00996-201ENST00000477392 2043 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
THRAP10827 EPHX2-209ENST00000521780 2038 ntTSL 2 BASIC15.69■□□□□ 0.1
THRAP10827 RNF135-202ENST00000328381 2892 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
THRAP10827 CCDC84-201ENST00000334418 1202 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
THRAP10827 CALY-202ENST00000368555 783 ntTSL 2 BASIC15.69■□□□□ 0.1
THRAP10827 RBM3-202ENST00000376755 1130 ntAPPRIS P1 TSL 2 BASIC15.69■□□□□ 0.1
THRAP10827 SNRPB-201ENST00000381342 1154 ntAPPRIS ALT1 TSL 1 (best) BASIC15.69■□□□□ 0.1
THRAP10827 GPR162-202ENST00000382315 1150 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
THRAP10827 PSMB8-203ENST00000395339 1025 ntTSL 3 BASIC15.69■□□□□ 0.1
THRAP10827 PQLC3-202ENST00000402361 696 ntTSL 2 BASIC15.69■□□□□ 0.1
THRAP10827 HAUS4P1-201ENST00000406739 1145 ntBASIC15.69■□□□□ 0.1
THRAP10827 AL080243.2-201ENST00000418783 582 ntBASIC15.69■□□□□ 0.1
THRAP10827 AC093702.1-201ENST00000423433 367 ntTSL 3 BASIC15.69■□□□□ 0.1
THRAP10827 AL669831.5-201ENST00000434264 844 ntTSL 5 BASIC15.69■□□□□ 0.1
THRAP10827 SNRPB-202ENST00000438552 1008 ntAPPRIS P4 TSL 1 (best) BASIC15.69■□□□□ 0.1
THRAP10827 SPTLC1P1-201ENST00000447199 261 ntBASIC15.69■□□□□ 0.1
THRAP10827 AL451067.1-201ENST00000453111 394 ntTSL 2 BASIC15.69■□□□□ 0.1
THRAP10827 TMPRSS11CP-201ENST00000453277 683 ntBASIC15.69■□□□□ 0.1
THRAP10827 REEP4-207ENST00000523293 913 ntTSL 3 BASIC15.69■□□□□ 0.1
THRAP10827 FKBP11-208ENST00000550765 1030 ntAPPRIS P3 TSL 1 (best) BASIC15.69■□□□□ 0.1
THRAP10827 PPHLN1-221ENST00000552761 1095 ntAPPRIS ALT2 TSL 1 (best) BASIC15.69■□□□□ 0.1
THRAP10827 COQ9-214ENST00000567933 882 ntTSL 3 BASIC15.69■□□□□ 0.1
THRAP10827 MYMX-202ENST00000576476 682 ntAPPRIS P1 TSL 3 BASIC15.69■□□□□ 0.1
THRAP10827 SPDYE22P-201ENST00000582158 798 ntBASIC15.69■□□□□ 0.1
THRAP10827 AL355974.2-201ENST00000614099 556 ntTSL 4 BASIC15.69■□□□□ 0.1
THRAP10827 AL355974.2-202ENST00000617298 936 ntTSL 3 BASIC15.69■□□□□ 0.1
THRAP10827 NR6A1-205ENST00000487099 7031 ntAPPRIS P3 TSL 1 (best) BASIC15.69■□□□□ 0.1
THRAP10827 BUD13-202ENST00000375445 1793 ntAPPRIS ALT2 TSL 1 (best) BASIC15.69■□□□□ 0.1
THRAP10827 GRAMD1C-201ENST00000358160 4177 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
THRAP10827 IER5-201ENST00000367577 4188 ntAPPRIS P1 BASIC15.69■□□□□ 0.1
THRAP10827 MICAL1-201ENST00000358577 3142 ntAPPRIS ALT2 TSL 1 (best) BASIC15.69■□□□□ 0.1
THRAP10827 MFNG-201ENST00000356998 2088 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
THRAP10827 TAF6-209ENST00000452041 2297 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
THRAP10827 ZNF280D-207ENST00000559237 4902 ntAPPRIS ALT2 TSL 1 (best) BASIC15.69■□□□□ 0.1
THRAP10827 DIS3-202ENST00000377780 5232 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
Retrieved 100 of 98,524 protein–RNA pairs in 33.8 ms