Protein–RNA interactions for Protein: P09630

HOXC6, Homeobox protein Hox-C6, humanhuman

Predictions only

Length 235 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC6P09630 ZACNP1-201ENST00000612259 710 ntBASIC17.41■□□□□ 0.38
HOXC6P09630 AC138649.2-201ENST00000615886 705 ntBASIC17.41■□□□□ 0.38
HOXC6P09630 AC091812.3-201ENST00000621362 345 ntBASIC17.41■□□□□ 0.38
HOXC6P09630 AL603764.1-201ENST00000636452 321 ntBASIC17.41■□□□□ 0.38
HOXC6P09630 FAM181A-201ENST00000267594 1816 ntTSL 2 BASIC17.41■□□□□ 0.38
HOXC6P09630 BLK-205ENST00000529894 2017 ntTSL 5 BASIC17.41■□□□□ 0.38
HOXC6P09630 TRNT1-201ENST00000251607 2276 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
HOXC6P09630 TCP1-201ENST00000321394 2499 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
HOXC6P09630 ACSL1-208ENST00000507295 2490 ntTSL 2 BASIC17.41■□□□□ 0.38
HOXC6P09630 ZSCAN32-205ENST00000439568 1746 ntTSL 2 BASIC17.41■□□□□ 0.38
HOXC6P09630 ZNF7-218ENST00000544249 2125 ntTSL 2 BASIC17.41■□□□□ 0.38
HOXC6P09630 CXXC1-201ENST00000285106 2936 ntAPPRIS P3 TSL 1 (best) BASIC17.41■□□□□ 0.38
HOXC6P09630 LRRC20-206ENST00000395011 2903 ntTSL 4 BASIC17.41■□□□□ 0.38
HOXC6P09630 ADRB3-201ENST00000345060 2950 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
HOXC6P09630 SCP2-204ENST00000407246 2239 ntTSL 2 BASIC17.4■□□□□ 0.38
HOXC6P09630 BCAT2-202ENST00000402551 2041 ntTSL 2 BASIC17.4■□□□□ 0.38
HOXC6P09630 PIKFYVE-202ENST00000308862 1640 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
HOXC6P09630 PPP1R18-206ENST00000615892 1448 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
HOXC6P09630 SUV39H1-202ENST00000376687 2871 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
HOXC6P09630 CHRNG-202ENST00000389494 2262 ntAPPRIS P1 TSL 5 BASIC17.4■□□□□ 0.38
HOXC6P09630 SARS2-201ENST00000221431 2057 ntAPPRIS P2 TSL 1 (best) BASIC17.4■□□□□ 0.38
HOXC6P09630 COL4A1-204ENST00000543140 2547 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
HOXC6P09630 PSME1-201ENST00000206451 1006 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
HOXC6P09630 C21orf58-201ENST00000291691 2975 ntAPPRIS P3 TSL 2 BASIC17.4■□□□□ 0.38
HOXC6P09630 BOLA3-201ENST00000295326 444 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
HOXC6P09630 FAM24B-202ENST00000368898 745 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
HOXC6P09630 CSNK2B-201ENST00000375865 908 ntAPPRIS P1 TSL 3 BASIC17.4■□□□□ 0.38
HOXC6P09630 DKFZp779M0652-201ENST00000378779 649 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
HOXC6P09630 DEF8-202ENST00000418391 852 ntTSL 2 BASIC17.4■□□□□ 0.38
HOXC6P09630 AC099552.2-201ENST00000418523 456 ntTSL 3 BASIC17.4■□□□□ 0.38
HOXC6P09630 EIF3FP3-201ENST00000434851 1086 ntBASIC17.4■□□□□ 0.38
HOXC6P09630 BMS1P17-203ENST00000444357 552 ntTSL 4 BASIC17.4■□□□□ 0.38
HOXC6P09630 AC092944.1-202ENST00000487238 483 ntTSL 4 BASIC17.4■□□□□ 0.38
HOXC6P09630 AC044849.1-201ENST00000519737 1188 ntBASIC17.4■□□□□ 0.38
HOXC6P09630 ANO1-AS1-201ENST00000524987 646 ntTSL 3 BASIC17.4■□□□□ 0.38
HOXC6P09630 CCDC144NL-AS1-209ENST00000577860 884 ntTSL 5 BASIC17.4■□□□□ 0.38
HOXC6P09630 AC073413.1-201ENST00000603927 732 ntBASIC17.4■□□□□ 0.38
HOXC6P09630 BMS1P22-203ENST00000609679 552 ntTSL 4 BASIC17.4■□□□□ 0.38
HOXC6P09630 AL645728.2-202ENST00000641679 227 ntBASIC17.4■□□□□ 0.38
HOXC6P09630 SLC45A1-202ENST00000471889 2784 ntTSL 5 BASIC17.4■□□□□ 0.38
HOXC6P09630 SLC25A45-201ENST00000294187 2196 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
HOXC6P09630 CARD14-202ENST00000570421 2607 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
HOXC6P09630 DUSP13-208ENST00000478873 1335 ntTSL 5 BASIC17.4■□□□□ 0.38
HOXC6P09630 DMTN-223ENST00000523782 2235 ntAPPRIS P1 TSL 5 BASIC17.4■□□□□ 0.38
HOXC6P09630 LRRN4-201ENST00000378858 2692 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
HOXC6P09630 TBL2-201ENST00000305632 3161 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
HOXC6P09630 ARSI-201ENST00000328668 3161 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
HOXC6P09630 C7orf33-201ENST00000307003 1354 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
HOXC6P09630 ZNF815P-201ENST00000421890 1352 ntTSL 2 BASIC17.4■□□□□ 0.38
HOXC6P09630 AL158070.2-201ENST00000623713 1621 ntBASIC17.39■□□□□ 0.38
HOXC6P09630 SPG11-215ENST00000559193 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.38
HOXC6P09630 SHANK2-204ENST00000409530 2123 ntTSL 5 BASIC17.39■□□□□ 0.38
HOXC6P09630 MRPS7-201ENST00000245539 1406 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.38
HOXC6P09630 FAM153A-220ENST00000513554 1437 ntAPPRIS ALT2 TSL 5 BASIC17.39■□□□□ 0.38
HOXC6P09630 RWDD4-201ENST00000326397 2641 ntAPPRIS P2 TSL 2 BASIC17.39■□□□□ 0.37
HOXC6P09630 AC022188.1-201ENST00000620960 1664 ntBASIC17.39■□□□□ 0.37
HOXC6P09630 MAP3K6-201ENST00000357582 4136 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
HOXC6P09630 FLT1-201ENST00000282397 7092 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
HOXC6P09630 FAM32A-201ENST00000263384 1455 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
HOXC6P09630 CTSO-201ENST00000433477 2954 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
HOXC6P09630 PCDH7-206ENST00000543491 4457 ntAPPRIS ALT2 BASIC17.39■□□□□ 0.37
HOXC6P09630 ATG10-203ENST00000458350 1795 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
HOXC6P09630 SDCCAG3P2-201ENST00000326105 1023 ntBASIC17.39■□□□□ 0.37
HOXC6P09630 PRTFDC1-203ENST00000376378 747 ntTSL 2 BASIC17.39■□□□□ 0.37
HOXC6P09630 MAPK15-203ENST00000395108 765 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
HOXC6P09630 SNHG17-201ENST00000413755 648 ntTSL 3 BASIC17.39■□□□□ 0.37
HOXC6P09630 CYP46A4P-201ENST00000414953 267 ntBASIC17.39■□□□□ 0.37
HOXC6P09630 AL008707.1-201ENST00000422498 534 ntBASIC17.39■□□□□ 0.37
HOXC6P09630 AC093879.1-201ENST00000508959 1176 ntTSL 2 BASIC17.39■□□□□ 0.37
HOXC6P09630 AP003171.2-201ENST00000528208 925 ntBASIC17.39■□□□□ 0.37
HOXC6P09630 AC025259.3-202ENST00000564363 687 ntTSL 2 BASIC17.39■□□□□ 0.37
HOXC6P09630 KLK3-207ENST00000595952 969 ntTSL 3 BASIC17.39■□□□□ 0.37
HOXC6P09630 MEF2C-227ENST00000626391 1182 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
HOXC6P09630 MEF2C-231ENST00000628656 1254 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
HOXC6P09630 DIMT1-201ENST00000199320 2859 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
HOXC6P09630 AC008770.3-201ENST00000590798 1562 ntAPPRIS P1 TSL 2 BASIC17.39■□□□□ 0.37
HOXC6P09630 SNRNP27-202ENST00000409116 1339 ntTSL 5 BASIC17.39■□□□□ 0.37
HOXC6P09630 SMO-201ENST00000249373 3738 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
HOXC6P09630 ACSL4-201ENST00000340800 5333 ntAPPRIS P4 TSL 5 BASIC17.39■□□□□ 0.37
HOXC6P09630 PCSK4-201ENST00000300954 2661 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
HOXC6P09630 AL035460.1-201ENST00000380593 1866 ntAPPRIS P1 TSL 2 BASIC17.39■□□□□ 0.37
HOXC6P09630 FAM227A-201ENST00000355830 2417 ntAPPRIS P5 TSL 5 BASIC17.39■□□□□ 0.37
HOXC6P09630 CTSL-203ENST00000343150 2177 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
HOXC6P09630 BCR-201ENST00000305877 7082 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
HOXC6P09630 TUBGCP6-204ENST00000439308 6078 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
HOXC6P09630 SGPP1-201ENST00000247225 3312 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
HOXC6P09630 CELF6-201ENST00000287202 3345 ntAPPRIS P3 TSL 1 (best) BASIC17.39■□□□□ 0.37
HOXC6P09630 SLC25A22-201ENST00000320230 2796 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
HOXC6P09630 DCP1B-202ENST00000535873 2231 ntTSL 2 BASIC17.39■□□□□ 0.37
HOXC6P09630 AMFR-201ENST00000290649 3600 ntAPPRIS P2 TSL 1 (best) BASIC17.39■□□□□ 0.37
HOXC6P09630 FES-207ENST00000444422 2266 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
HOXC6P09630 SHMT2-202ENST00000414700 2006 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
HOXC6P09630 KLHL24-201ENST00000242810 2345 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
HOXC6P09630 DBNDD1-202ENST00000304733 2081 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
HOXC6P09630 RRBP1-208ENST00000470422 2070 ntTSL 2 BASIC17.38■□□□□ 0.37
HOXC6P09630 RCL1-204ENST00000381750 2134 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
HOXC6P09630 NFATC4-222ENST00000555590 2830 ntAPPRIS ALT2 TSL 1 (best) BASIC17.38■□□□□ 0.37
HOXC6P09630 RAB1A-201ENST00000398529 1198 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
HOXC6P09630 CHMP1AP1-201ENST00000445563 662 ntBASIC17.38■□□□□ 0.37
HOXC6P09630 PCOLCE2-208ENST00000485766 1088 ntTSL 5 BASIC17.38■□□□□ 0.37
Retrieved 100 of 98,524 protein–RNA pairs in 47.8 ms