Protein–RNA interactions for Protein: P09326

CD48, CD48 antigen, humanhuman

Predictions only

Length 243 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD48P09326 CRLS1-203ENST00000452938 3859 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
CD48P09326 GOLGA5-201ENST00000163416 2969 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
CD48P09326 CBX7-201ENST00000216133 4081 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
CD48P09326 SCNN1D-205ENST00000379116 3044 ntAPPRIS P2 TSL 5 BASIC16.13■□□□□ 0.17
CD48P09326 SLC39A8-202ENST00000394833 3238 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
CD48P09326 VSIG10-202ENST00000359236 4946 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
CD48P09326 AL359258.3-201ENST00000622910 2331 ntBASIC16.13■□□□□ 0.17
CD48P09326 COMP-203ENST00000542601 2707 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
CD48P09326 HNRNPUL1-220ENST00000602130 2932 ntAPPRIS ALT2 TSL 1 (best) BASIC16.13■□□□□ 0.17
CD48P09326 OXA1L-203ENST00000412791 1440 ntTSL 5 BASIC16.13■□□□□ 0.17
CD48P09326 PUS7-202ENST00000469408 2356 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
CD48P09326 ATP6V0E1-203ENST00000519374 1433 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
CD48P09326 LMF1-AS1-202ENST00000569574 1408 ntTSL 3 BASIC16.13■□□□□ 0.17
CD48P09326 KYAT1-202ENST00000320665 1623 ntTSL 2 BASIC16.13■□□□□ 0.17
CD48P09326 RNF183-201ENST00000297894 1830 ntAPPRIS P1 TSL 2 BASIC16.13■□□□□ 0.17
CD48P09326 BCAR1-207ENST00000538440 3192 ntAPPRIS ALT2 TSL 2 BASIC16.13■□□□□ 0.17
CD48P09326 NDUFA11-202ENST00000418389 2406 ntTSL 2 BASIC16.13■□□□□ 0.17
CD48P09326 ZNF777-201ENST00000247930 3233 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
CD48P09326 CYB561D1-202ENST00000369868 1085 ntTSL 2 BASIC16.13■□□□□ 0.17
CD48P09326 CLTA-203ENST00000396603 1090 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
CD48P09326 NUDT1-205ENST00000397048 783 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
CD48P09326 AL133267.1-201ENST00000398220 340 ntBASIC16.13■□□□□ 0.17
CD48P09326 RPL5P21-201ENST00000404620 815 ntBASIC16.13■□□□□ 0.17
CD48P09326 LINC01160-202ENST00000450155 894 ntTSL 3 BASIC16.13■□□□□ 0.17
CD48P09326 TMEM176B-205ENST00000450753 1006 ntTSL 2 BASIC16.13■□□□□ 0.17
CD48P09326 AC004890.2-204ENST00000481968 304 ntBASIC16.13■□□□□ 0.17
CD48P09326 AC008738.7-201ENST00000609744 511 ntBASIC16.13■□□□□ 0.17
CD48P09326 GPALPP1-207ENST00000611650 899 ntBASIC16.13■□□□□ 0.17
CD48P09326 AC004790.1-201ENST00000612686 536 ntBASIC16.13■□□□□ 0.17
CD48P09326 SELENOH-206ENST00000622257 1291 ntAPPRIS ALT1 TSL 5 BASIC16.13■□□□□ 0.17
CD48P09326 AC004840.1-201ENST00000636359 365 ntBASIC16.13■□□□□ 0.17
CD48P09326 FAM230B-201ENST00000415376 1859 ntTSL 2 BASIC16.13■□□□□ 0.17
CD48P09326 AC008079.1-201ENST00000434390 1859 ntTSL 5 BASIC16.13■□□□□ 0.17
CD48P09326 HARS-205ENST00000457527 1896 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
CD48P09326 PIDD1-202ENST00000411829 2886 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
CD48P09326 AC106881.1-201ENST00000605849 3329 ntBASIC16.13■□□□□ 0.17
CD48P09326 ANAPC5-201ENST00000261819 2513 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
CD48P09326 DTNB-228ENST00000496972 2328 ntTSL 2 BASIC16.13■□□□□ 0.17
CD48P09326 ETV3-201ENST00000326786 1539 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
CD48P09326 AC012414.7-201ENST00000621235 1507 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
CD48P09326 CCDC85A-201ENST00000407595 3982 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
CD48P09326 NCOA1-205ENST00000406961 7289 ntAPPRIS P4 TSL 5 BASIC16.13■□□□□ 0.17
CD48P09326 MARS-233ENST00000628866 2583 ntTSL 5 BASIC16.13■□□□□ 0.17
CD48P09326 ZNF367-201ENST00000375256 3646 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
CD48P09326 RBM12-201ENST00000359646 5332 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
CD48P09326 RBM14-201ENST00000310137 2828 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
CD48P09326 ZFP41-203ENST00000520584 3284 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
CD48P09326 WDR61-201ENST00000267973 1387 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
CD48P09326 SHMT2-202ENST00000414700 2006 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
CD48P09326 GPN1-212ENST00000616939 1832 ntAPPRIS P2 TSL 1 (best) BASIC16.12■□□□□ 0.17
CD48P09326 PCCB-218ENST00000490504 1613 ntTSL 3 BASIC16.12■□□□□ 0.17
CD48P09326 KCNK4-TEX40-201ENST00000539086 2733 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
CD48P09326 GUCD1-206ENST00000435822 3613 ntAPPRIS ALT1 TSL 1 (best) BASIC16.12■□□□□ 0.17
CD48P09326 SULT1C4-201ENST00000272452 1860 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
CD48P09326 GOLGA8H-201ENST00000566740 1899 ntAPPRIS P1 TSL 5 BASIC16.12■□□□□ 0.17
CD48P09326 GOLGA8J-201ENST00000567927 1899 ntAPPRIS P1 TSL 5 BASIC16.12■□□□□ 0.17
CD48P09326 MROH6-201ENST00000398882 3469 ntAPPRIS P2 TSL 5 BASIC16.12■□□□□ 0.17
CD48P09326 SLK-202ENST00000369755 7766 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
CD48P09326 MGEA5-201ENST00000357797 3263 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
CD48P09326 RAB3IP-204ENST00000378815 2386 ntTSL 2 BASIC16.12■□□□□ 0.17
CD48P09326 IL9R-201ENST00000244174 1944 ntAPPRIS P3 TSL 1 (best) BASIC16.12■□□□□ 0.17
CD48P09326 CIAPIN1-201ENST00000394391 2182 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
CD48P09326 ZNF586-203ENST00000396154 2163 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
CD48P09326 UBL7-209ENST00000567435 1720 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
CD48P09326 NFU1-201ENST00000303698 1034 ntAPPRIS ALT2 TSL 1 (best) BASIC16.12■□□□□ 0.17
CD48P09326 LINC01534-201ENST00000425254 815 ntTSL 2 BASIC16.12■□□□□ 0.17
CD48P09326 AC114501.2-201ENST00000439631 535 ntBASIC16.12■□□□□ 0.17
CD48P09326 METTL6-204ENST00000450816 1221 ntTSL 2 BASIC16.12■□□□□ 0.17
CD48P09326 AC092183.1-201ENST00000469884 875 ntBASIC16.12■□□□□ 0.17
CD48P09326 NAALADL1-208ENST00000528884 973 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
CD48P09326 AC087612.1-201ENST00000560238 658 ntTSL 5 BASIC16.12■□□□□ 0.17
CD48P09326 OIP5-AS1-209ENST00000561226 775 ntTSL 3 BASIC16.12■□□□□ 0.17
CD48P09326 AC138304.1-201ENST00000563841 424 ntTSL 3 BASIC16.12■□□□□ 0.17
CD48P09326 LITAF-218ENST00000576036 603 ntAPPRIS P1 TSL 4 BASIC16.12■□□□□ 0.17
CD48P09326 AC087645.2-202ENST00000586583 643 ntTSL 4 BASIC16.12■□□□□ 0.17
CD48P09326 AC025181.2-201ENST00000606994 802 ntBASIC16.12■□□□□ 0.17
CD48P09326 C11orf53-203ENST00000637637 1049 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
CD48P09326 HMGXB3-202ENST00000503427 5275 ntAPPRIS ALT2 TSL 5 BASIC16.12■□□□□ 0.17
CD48P09326 PLIN3-202ENST00000585479 1535 ntAPPRIS ALT1 TSL 1 (best) BASIC16.12■□□□□ 0.17
CD48P09326 RHPN1-201ENST00000289013 3683 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
CD48P09326 SFRP4-201ENST00000436072 2966 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
CD48P09326 ETV2-204ENST00000403402 1335 ntAPPRIS P3 TSL 1 (best) BASIC16.12■□□□□ 0.17
CD48P09326 RGS6-210ENST00000553530 5685 ntAPPRIS P3 TSL 1 (best) BASIC16.12■□□□□ 0.17
CD48P09326 MROH4P-201ENST00000431302 1578 ntBASIC16.12■□□□□ 0.17
CD48P09326 CPA5-202ENST00000431780 1803 ntTSL 2 BASIC16.12■□□□□ 0.17
CD48P09326 PA2G4-201ENST00000303305 2577 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
CD48P09326 GLIDR-202ENST00000625350 2588 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
CD48P09326 GTF2IRD1-203ENST00000455841 3315 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
CD48P09326 SNHG22-201ENST00000589499 1615 ntTSL 2 BASIC16.12■□□□□ 0.17
CD48P09326 SERPINE2-202ENST00000409304 2161 ntAPPRIS ALT1 TSL 1 (best) BASIC16.11■□□□□ 0.17
CD48P09326 ACTL6A-202ENST00000429709 1901 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
CD48P09326 CHRDL1-204ENST00000444321 1658 ntAPPRIS ALT1 TSL 1 (best) BASIC16.11■□□□□ 0.17
CD48P09326 ACTL9-201ENST00000324436 1426 ntAPPRIS P1 BASIC16.11■□□□□ 0.17
CD48P09326 ASIC4-202ENST00000358078 2741 ntAPPRIS ALT2 TSL 5 BASIC16.11■□□□□ 0.17
CD48P09326 CACNA2D2-203ENST00000423994 5329 ntAPPRIS ALT2 TSL 5 BASIC16.11■□□□□ 0.17
CD48P09326 RCC2-202ENST00000375436 4087 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
CD48P09326 SYNRG-223ENST00000616179 4050 ntAPPRIS ALT2 TSL 5 BASIC16.11■□□□□ 0.17
CD48P09326 RPTOR-203ENST00000570891 2286 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
CD48P09326 MAPT-213ENST00000571987 2277 ntAPPRIS P4 TSL 5 BASIC16.11■□□□□ 0.17
CD48P09326 SLC25A4-201ENST00000281456 4440 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Retrieved 100 of 98,524 protein–RNA pairs in 43.2 ms