Protein–RNA interactions for Protein: P08034

GJB1, Gap junction beta-1 protein, humanhuman

Predictions only

Length 283 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GJB1P08034 PPP1R32-205ENST00000538185 1107 ntTSL 2 BASIC17.46■□□□□ 0.39
GJB1P08034 NEAT1-203ENST00000601801 487 ntTSL 4 BASIC17.46■□□□□ 0.39
GJB1P08034 RN7SL725P-201ENST00000606439 259 ntBASIC17.46■□□□□ 0.39
GJB1P08034 AC131235.3-202ENST00000608135 362 ntTSL 5 BASIC17.46■□□□□ 0.39
GJB1P08034 ARHGEF28-212ENST00000513042 6273 ntAPPRIS ALT2 TSL 5 BASIC17.46■□□□□ 0.39
GJB1P08034 PRMT5-203ENST00000397440 1907 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
GJB1P08034 PCDHB19P-201ENST00000570871 2371 ntBASIC17.46■□□□□ 0.39
GJB1P08034 GABARAP-201ENST00000302386 1634 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
GJB1P08034 NSUN5-203ENST00000428206 2269 ntAPPRIS ALT2 TSL 2 BASIC17.46■□□□□ 0.39
GJB1P08034 CHTOP-203ENST00000368690 2165 ntAPPRIS ALT1 TSL 1 (best) BASIC17.46■□□□□ 0.39
GJB1P08034 TNIP1-220ENST00000610535 2726 ntTSL 5 BASIC17.46■□□□□ 0.39
GJB1P08034 VCAN-204ENST00000502527 2087 ntAPPRIS ALT1 TSL 1 (best) BASIC17.46■□□□□ 0.39
GJB1P08034 GDPD5-214ENST00000533784 2441 ntTSL 1 (best) BASIC17.46■□□□□ 0.38
GJB1P08034 COL23A1-202ENST00000407622 2329 ntAPPRIS ALT2 TSL 5 BASIC17.46■□□□□ 0.38
GJB1P08034 AC020916.1-201ENST00000587762 1774 ntBASIC17.45■□□□□ 0.38
GJB1P08034 ARHGAP6-202ENST00000337414 5117 ntAPPRIS P4 TSL 1 (best) BASIC17.45■□□□□ 0.38
GJB1P08034 WDR45-202ENST00000356463 1688 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
GJB1P08034 TP73-209ENST00000603362 1668 ntTSL 5 BASIC17.45■□□□□ 0.38
GJB1P08034 EDA-204ENST00000374553 5272 ntAPPRIS ALT1 TSL 1 (best) BASIC17.45■□□□□ 0.38
GJB1P08034 FAM215B-201ENST00000458392 2183 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
GJB1P08034 ADGRB2-202ENST00000373658 5414 ntAPPRIS ALT2 TSL 5 BASIC17.45■□□□□ 0.38
GJB1P08034 AC091980.2-201ENST00000619056 2775 ntAPPRIS P1 BASIC17.45■□□□□ 0.38
GJB1P08034 PDGFB-201ENST00000331163 3497 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
GJB1P08034 ATP1A1-AS1-202ENST00000369492 1011 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
GJB1P08034 UFM1-202ENST00000379649 846 ntTSL 4 BASIC17.45■□□□□ 0.38
GJB1P08034 MIR648-201ENST00000385046 94 ntBASIC17.45■□□□□ 0.38
GJB1P08034 AC099552.1-201ENST00000431083 744 ntTSL 5 BASIC17.45■□□□□ 0.38
GJB1P08034 AL596276.2-201ENST00000447525 331 ntBASIC17.45■□□□□ 0.38
GJB1P08034 FDPS-203ENST00000447866 1256 ntAPPRIS ALT1 TSL 5 BASIC17.45■□□□□ 0.38
GJB1P08034 DNAJC27-AS1-207ENST00000451291 488 ntTSL 3 BASIC17.45■□□□□ 0.38
GJB1P08034 AC024681.1-201ENST00000521917 487 ntBASIC17.45■□□□□ 0.38
GJB1P08034 PSORS1C1-206ENST00000547221 655 ntAPPRIS ALT2 TSL 3 BASIC17.45■□□□□ 0.38
GJB1P08034 SLIRP-210ENST00000557431 725 ntTSL 2 BASIC17.45■□□□□ 0.38
GJB1P08034 LINC00116-203ENST00000611969 441 ntAPPRIS ALT2 TSL 1 (best) BASIC17.45■□□□□ 0.38
GJB1P08034 NEU3-206ENST00000532963 1643 ntTSL 2 BASIC17.45■□□□□ 0.38
GJB1P08034 GDF2-201ENST00000581492 1955 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
GJB1P08034 ASAP3-212ENST00000618240 2226 ntTSL 5 BASIC17.45■□□□□ 0.38
GJB1P08034 NAT9-210ENST00000580301 1860 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
GJB1P08034 ZNF398-203ENST00000483892 2121 ntTSL 5 BASIC17.45■□□□□ 0.38
GJB1P08034 EYA2-208ENST00000497062 2384 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
GJB1P08034 LMNA-203ENST00000368297 1679 ntTSL 2 BASIC17.45■□□□□ 0.38
GJB1P08034 LDB3-208ENST00000623007 1664 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
GJB1P08034 OPRK1-205ENST00000612786 5196 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
GJB1P08034 ARL14EP-201ENST00000282032 2430 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
GJB1P08034 VIPR2-201ENST00000262178 3944 ntAPPRIS P2 TSL 1 (best) BASIC17.44■□□□□ 0.38
GJB1P08034 MAGEA4-205ENST00000393920 1721 ntAPPRIS P1 TSL 2 BASIC17.44■□□□□ 0.38
GJB1P08034 DNM2-202ENST00000359692 3588 ntAPPRIS P5 TSL 1 (best) BASIC17.44■□□□□ 0.38
GJB1P08034 PCGF3-201ENST00000362003 5685 ntAPPRIS P1 TSL 5 BASIC17.44■□□□□ 0.38
GJB1P08034 ADAM23-201ENST00000264377 6330 ntAPPRIS P2 TSL 1 (best) BASIC17.44■□□□□ 0.38
GJB1P08034 VPS37C-201ENST00000301765 2865 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
GJB1P08034 SMPDL3A-201ENST00000368440 1851 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
GJB1P08034 CYP4B1-203ENST00000371923 2110 ntAPPRIS ALT1 TSL 1 (best) BASIC17.44■□□□□ 0.38
GJB1P08034 AKAP9-205ENST00000394564 1356 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
GJB1P08034 LHFPL3-201ENST00000401970 1378 ntAPPRIS ALT1 TSL 1 (best) BASIC17.44■□□□□ 0.38
GJB1P08034 HHATL-205ENST00000441594 1865 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
GJB1P08034 TSPAN17-209ENST00000515708 2361 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
GJB1P08034 PLTP-205ENST00000477313 2255 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
GJB1P08034 AC026904.3-201ENST00000636550 1530 ntTSL 5 BASIC17.44■□□□□ 0.38
GJB1P08034 FAM177A1-202ENST00000382406 858 ntAPPRIS ALT2 TSL 1 (best) BASIC17.44■□□□□ 0.38
GJB1P08034 ACTBP8-201ENST00000403258 1108 ntBASIC17.44■□□□□ 0.38
GJB1P08034 GSTK1-202ENST00000409500 888 ntTSL 2 BASIC17.44■□□□□ 0.38
GJB1P08034 AC079807.2-203ENST00000417692 656 ntTSL 2 BASIC17.44■□□□□ 0.38
GJB1P08034 AC007274.2-201ENST00000421675 662 ntBASIC17.44■□□□□ 0.38
GJB1P08034 AL591684.1-201ENST00000434533 234 ntTSL 5 BASIC17.44■□□□□ 0.38
GJB1P08034 AL136982.2-201ENST00000451760 234 ntTSL 5 BASIC17.44■□□□□ 0.38
GJB1P08034 NME2-207ENST00000514264 850 ntAPPRIS P1 TSL 2 BASIC17.44■□□□□ 0.38
GJB1P08034 SNHG6-201ENST00000520348 648 ntTSL 2 BASIC17.44■□□□□ 0.38
GJB1P08034 HBS1L-208ENST00000525067 582 ntTSL 3 BASIC17.44■□□□□ 0.38
GJB1P08034 CFL1-214ENST00000534769 758 ntTSL 2 BASIC17.44■□□□□ 0.38
GJB1P08034 MRPL48-210ENST00000542303 661 ntTSL 3 BASIC17.44■□□□□ 0.38
GJB1P08034 LINC01475-201ENST00000548010 766 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
GJB1P08034 AC063977.3-201ENST00000597569 547 ntTSL 4 BASIC17.44■□□□□ 0.38
GJB1P08034 BX539320.1-201ENST00000623759 877 ntBASIC17.44■□□□□ 0.38
GJB1P08034 AC100757.4-201ENST00000626934 759 ntBASIC17.44■□□□□ 0.38
GJB1P08034 CCDC197-205ENST00000636493 1279 ntAPPRIS P5 TSL 5 BASIC17.44■□□□□ 0.38
GJB1P08034 MPP3-201ENST00000398389 2182 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
GJB1P08034 ACE-204ENST00000428043 5120 ntTSL 2 BASIC17.44■□□□□ 0.38
GJB1P08034 DLG1-AS1-202ENST00000430666 1694 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
GJB1P08034 AL138799.1-201ENST00000448213 1675 ntBASIC17.44■□□□□ 0.38
GJB1P08034 ERP29-203ENST00000546477 1698 ntTSL 3 BASIC17.44■□□□□ 0.38
GJB1P08034 TCF7-218ENST00000520958 1408 ntTSL 2 BASIC17.44■□□□□ 0.38
GJB1P08034 C11orf24-201ENST00000304271 2063 ntAPPRIS P3 TSL 1 (best) BASIC17.44■□□□□ 0.38
GJB1P08034 DIMT1-201ENST00000199320 2859 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
GJB1P08034 CARD14-202ENST00000570421 2607 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
GJB1P08034 MTHFR-217ENST00000641820 1569 ntBASIC17.44■□□□□ 0.38
GJB1P08034 UBE2R2-201ENST00000263228 4075 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
GJB1P08034 FRA10AC1-201ENST00000359204 3089 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
GJB1P08034 EEFSEC-202ENST00000483457 1859 ntTSL 5 BASIC17.44■□□□□ 0.38
GJB1P08034 ATP6AP2-226ENST00000637526 1862 ntAPPRIS ALT2 TSL 5 BASIC17.44■□□□□ 0.38
GJB1P08034 FGD5-201ENST00000285046 5720 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
GJB1P08034 RPN1-201ENST00000296255 2314 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
GJB1P08034 RUNX2-202ENST00000371432 5487 ntAPPRIS ALT2 TSL 5 BASIC17.43■□□□□ 0.38
GJB1P08034 AC008132.1-202ENST00000342005 1389 ntBASIC17.43■□□□□ 0.38
GJB1P08034 ACAT2-201ENST00000367048 3180 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
GJB1P08034 MEAF6-201ENST00000296214 1525 ntAPPRIS ALT1 TSL 1 (best) BASIC17.43■□□□□ 0.38
GJB1P08034 PARVB-210ENST00000619710 1530 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
GJB1P08034 UNC5C-203ENST00000506749 2220 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
GJB1P08034 AC026412.1-202ENST00000512335 2231 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
GJB1P08034 ELFN2-208ENST00000430883 1970 ntTSL 2 BASIC17.43■□□□□ 0.38
GJB1P08034 TMEM40-201ENST00000264728 984 ntAPPRIS P3 TSL 2 BASIC17.43■□□□□ 0.38
Retrieved 100 of 98,524 protein–RNA pairs in 58 ms