Protein–RNA interactions for Protein: P05997

COL5A2, Collagen alpha-2(V) chain, humanhuman

Predicted RBP Predictions only

Length 1,499 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL5A2P05997 AC132872.2-201ENST00000581303 2368 ntTSL 5 BASIC20■□□□□ 0.79
COL5A2P05997 CBSL-201ENST00000398168 2514 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
COL5A2P05997 ADAMTSL1-204ENST00000380545 1562 ntTSL 1 (best) BASIC20■□□□□ 0.79
COL5A2P05997 DHCR7-201ENST00000355527 2666 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
COL5A2P05997 WIPF1-201ENST00000272746 3028 ntAPPRIS ALT2 TSL 1 (best) BASIC20■□□□□ 0.79
COL5A2P05997 CAP2P1-201ENST00000557743 1390 ntBASIC20■□□□□ 0.79
COL5A2P05997 AC010547.4-201ENST00000561754 1378 ntAPPRIS P1 TSL 5 BASIC20■□□□□ 0.79
COL5A2P05997 IL11-201ENST00000264563 2281 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
COL5A2P05997 AC009090.5-201ENST00000624886 2285 ntBASIC20■□□□□ 0.79
COL5A2P05997 RNF32-204ENST00000392743 1746 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
COL5A2P05997 AL360270.3-201ENST00000609118 1348 ntBASIC20■□□□□ 0.79
COL5A2P05997 TOM1-204ENST00000411850 2390 ntAPPRIS ALT1 TSL 1 (best) BASIC20■□□□□ 0.79
COL5A2P05997 PRDM5-201ENST00000264808 5330 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
COL5A2P05997 GOSR2-211ENST00000623037 1814 ntTSL 5 BASIC20■□□□□ 0.79
COL5A2P05997 PROB1-201ENST00000434752 5122 ntAPPRIS P1 BASIC20■□□□□ 0.79
COL5A2P05997 RPP40-202ENST00000380051 1483 ntAPPRIS P1 TSL 5 BASIC20■□□□□ 0.79
COL5A2P05997 MGAT2-201ENST00000305386 2687 ntAPPRIS P1 BASIC19.99■□□□□ 0.79
COL5A2P05997 SYTL3-203ENST00000367081 2692 ntAPPRIS P3 TSL 5 BASIC19.99■□□□□ 0.79
COL5A2P05997 NR0B2-201ENST00000254227 1156 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
COL5A2P05997 MAP2K3-201ENST00000316920 1246 ntTSL 5 BASIC19.99■□□□□ 0.79
COL5A2P05997 ROR2-202ENST00000375715 2993 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
COL5A2P05997 ETV2-201ENST00000379023 926 ntAPPRIS ALT2 TSL 1 (best) BASIC19.99■□□□□ 0.79
COL5A2P05997 AC135178.1-201ENST00000458568 537 ntTSL 3 BASIC19.99■□□□□ 0.79
COL5A2P05997 ZNF124-204ENST00000491356 956 ntTSL 2 BASIC19.99■□□□□ 0.79
COL5A2P05997 LINC00461-207ENST00000506978 564 ntTSL 5 BASIC19.99■□□□□ 0.79
COL5A2P05997 AC246817.2-203ENST00000517357 569 ntTSL 4 BASIC19.99■□□□□ 0.79
COL5A2P05997 AC246817.2-202ENST00000519393 564 ntTSL 4 BASIC19.99■□□□□ 0.79
COL5A2P05997 AC084346.1-201ENST00000520962 528 ntTSL 4 BASIC19.99■□□□□ 0.79
COL5A2P05997 LGALS3-204ENST00000554715 916 ntTSL 3 BASIC19.99■□□□□ 0.79
COL5A2P05997 SHBG-207ENST00000570547 801 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
COL5A2P05997 AC103808.5-201ENST00000577797 462 ntTSL 3 BASIC19.99■□□□□ 0.79
COL5A2P05997 MIR3677-201ENST00000578964 60 ntBASIC19.99■□□□□ 0.79
COL5A2P05997 AL157813.1-201ENST00000612996 587 ntBASIC19.99■□□□□ 0.79
COL5A2P05997 AC007718.1-201ENST00000621078 280 ntBASIC19.99■□□□□ 0.79
COL5A2P05997 CCDC197-205ENST00000636493 1279 ntAPPRIS P5 TSL 5 BASIC19.99■□□□□ 0.79
COL5A2P05997 PTP4A3-201ENST00000329397 2785 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
COL5A2P05997 PCDHA12-202ENST00000613593 2588 ntBASIC19.99■□□□□ 0.79
COL5A2P05997 DRC3-201ENST00000313838 2064 ntAPPRIS P1 TSL 5 BASIC19.99■□□□□ 0.79
COL5A2P05997 AC020910.5-201ENST00000623668 1865 ntBASIC19.99■□□□□ 0.79
COL5A2P05997 NR2C1-201ENST00000330677 2014 ntTSL 5 BASIC19.99■□□□□ 0.79
COL5A2P05997 ZNF84-208ENST00000539354 3237 ntAPPRIS P2 TSL 1 (best) BASIC19.99■□□□□ 0.79
COL5A2P05997 UIMC1-201ENST00000377227 2570 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
COL5A2P05997 UROD-201ENST00000246337 1300 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
COL5A2P05997 AC091230.1-202ENST00000564823 5356 ntTSL 2 BASIC19.99■□□□□ 0.79
COL5A2P05997 MEPCE-201ENST00000310512 3030 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
COL5A2P05997 OIT3-202ENST00000622652 1602 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
COL5A2P05997 MAML1-201ENST00000292599 5723 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
COL5A2P05997 TK2-207ENST00000544898 3441 ntAPPRIS P3 TSL 1 (best) BASIC19.99■□□□□ 0.79
COL5A2P05997 UQCRQ-203ENST00000378670 839 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
COL5A2P05997 CRELD1-203ENST00000397170 1728 ntAPPRIS P1 TSL 5 BASIC19.99■□□□□ 0.79
COL5A2P05997 TMEM219-202ENST00000414689 1024 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
COL5A2P05997 ERICH5-202ENST00000545282 596 ntAPPRIS ALT2 TSL 2 BASIC19.99■□□□□ 0.79
COL5A2P05997 AC133919.1-201ENST00000562203 416 ntTSL 3 BASIC19.99■□□□□ 0.79
COL5A2P05997 TMEM219-204ENST00000566848 1292 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
COL5A2P05997 GFER-204ENST00000567719 483 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
COL5A2P05997 NAT9-210ENST00000580301 1860 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
COL5A2P05997 AC005962.1-201ENST00000584100 773 ntBASIC19.99■□□□□ 0.79
COL5A2P05997 AC007881.3-201ENST00000608897 607 ntBASIC19.99■□□□□ 0.79
COL5A2P05997 HIST1H3C-201ENST00000612966 411 ntAPPRIS P1 BASIC19.99■□□□□ 0.79
COL5A2P05997 TMPRSS4-214ENST00000523251 1689 ntAPPRIS ALT2 TSL 2 BASIC19.98■□□□□ 0.79
COL5A2P05997 LETMD1-206ENST00000547008 1665 ntTSL 2 BASIC19.98■□□□□ 0.79
COL5A2P05997 NIT1-203ENST00000368009 1362 ntAPPRIS P3 TSL 1 (best) BASIC19.98■□□□□ 0.79
COL5A2P05997 EN2-201ENST00000297375 3395 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
COL5A2P05997 SLC3A2-204ENST00000377891 2222 ntTSL 2 BASIC19.98■□□□□ 0.79
COL5A2P05997 SCPEP1-201ENST00000262288 1942 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
COL5A2P05997 RBCK1-202ENST00000356286 2774 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
COL5A2P05997 CBX2-202ENST00000310942 4644 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
COL5A2P05997 CKMT1B-201ENST00000300283 1779 ntAPPRIS P1 TSL 5 BASIC19.98■□□□□ 0.79
COL5A2P05997 CKMT1A-204ENST00000434505 1779 ntAPPRIS P1 TSL 5 BASIC19.98■□□□□ 0.79
COL5A2P05997 SH2D3C-213ENST00000629203 2478 ntTSL 2 BASIC19.98■□□□□ 0.79
COL5A2P05997 RABL2B-204ENST00000395593 2341 ntAPPRIS ALT2 TSL 1 (best) BASIC19.98■□□□□ 0.79
COL5A2P05997 KRT8P21-201ENST00000430398 1491 ntBASIC19.98■□□□□ 0.79
COL5A2P05997 SLC35C2-202ENST00000317734 2175 ntTSL 2 BASIC19.98■□□□□ 0.79
COL5A2P05997 BPIFB2-201ENST00000170150 1898 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
COL5A2P05997 AAMP-201ENST00000248450 1886 ntAPPRIS P3 TSL 1 (best) BASIC19.98■□□□□ 0.79
COL5A2P05997 CD276-213ENST00000561213 2690 ntAPPRIS ALT2 TSL 2 BASIC19.98■□□□□ 0.79
COL5A2P05997 RPN1-207ENST00000497289 2137 ntTSL 2 BASIC19.98■□□□□ 0.79
COL5A2P05997 ZNF805-201ENST00000354309 2396 ntTSL 5 BASIC19.98■□□□□ 0.79
COL5A2P05997 ZCCHC24-202ENST00000372336 4933 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
COL5A2P05997 ARHGAP27-214ENST00000532891 2604 ntAPPRIS ALT2 TSL 5 BASIC19.98■□□□□ 0.79
COL5A2P05997 CNR1-201ENST00000362094 1252 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
COL5A2P05997 AC239868.1-201ENST00000369385 493 ntBASIC19.98■□□□□ 0.79
COL5A2P05997 TREML1-202ENST00000426005 981 ntAPPRIS P3 TSL 1 (best) BASIC19.98■□□□□ 0.79
COL5A2P05997 AL109767.1-201ENST00000429450 564 ntTSL 4 BASIC19.98■□□□□ 0.79
COL5A2P05997 LINC00322-201ENST00000450205 699 ntTSL 3 BASIC19.98■□□□□ 0.79
COL5A2P05997 AC133961.1-201ENST00000503085 762 ntTSL 3 BASIC19.98■□□□□ 0.79
COL5A2P05997 IKBKB-212ENST00000519735 1166 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
COL5A2P05997 IMPA2-207ENST00000588927 787 ntTSL 5 BASIC19.98■□□□□ 0.79
COL5A2P05997 SMIM22-209ENST00000591870 355 ntAPPRIS ALT2 TSL 2 BASIC19.98■□□□□ 0.79
COL5A2P05997 HIST2H2BB-202ENST00000609585 563 ntTSL 2 BASIC19.98■□□□□ 0.79
COL5A2P05997 MIR6842-201ENST00000612539 65 ntBASIC19.98■□□□□ 0.79
COL5A2P05997 AP001065.2-201ENST00000617205 644 ntBASIC19.98■□□□□ 0.79
COL5A2P05997 IFI27-215ENST00000621160 644 ntAPPRIS P2 TSL 1 (best) BASIC19.98■□□□□ 0.79
COL5A2P05997 TOMM7-207ENST00000621567 241 ntAPPRIS ALT1 TSL 5 BASIC19.98■□□□□ 0.79
COL5A2P05997 MBD3L2B-201ENST00000636986 860 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
COL5A2P05997 FOXD4L1-201ENST00000306507 2491 ntAPPRIS P1 BASIC19.98■□□□□ 0.79
COL5A2P05997 SIPA1-209ENST00000534313 3521 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
COL5A2P05997 REXO1L4P-201ENST00000605109 1937 ntBASIC19.98■□□□□ 0.79
COL5A2P05997 LATS1-202ENST00000392273 2567 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
COL5A2P05997 LAPTM4A-201ENST00000175091 1765 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Retrieved 100 of 98,524 protein–RNA pairs in 93.7 ms