Protein–RNA interactions for Protein: P04085

PDGFA, Platelet-derived growth factor subunit A, humanhuman

Predictions only

Length 211 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFAP04085 MSMO1-202ENST00000393766 1789 ntTSL 2 BASIC14.65□□□□□ -0.06
PDGFAP04085 R3HDM2P2-201ENST00000401880 2116 ntBASIC14.65□□□□□ -0.06
PDGFAP04085 AHDC1-201ENST00000247087 6334 ntAPPRIS P1 TSL 5 BASIC14.64□□□□□ -0.07
PDGFAP04085 SGPP2-201ENST00000321276 3336 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
PDGFAP04085 DUSP14-204ENST00000613659 1559 ntAPPRIS P1 TSL 2 BASIC14.64□□□□□ -0.07
PDGFAP04085 SHTN1-201ENST00000260777 5308 ntAPPRIS ALT2 TSL 2 BASIC14.64□□□□□ -0.07
PDGFAP04085 MAGI1-216ENST00000497477 3555 ntTSL 5 BASIC14.64□□□□□ -0.07
PDGFAP04085 AL591845.1-201ENST00000373137 1838 ntTSL 2 BASIC14.64□□□□□ -0.07
PDGFAP04085 SPEG-205ENST00000396698 3379 ntTSL 5 BASIC14.64□□□□□ -0.07
PDGFAP04085 DHPS-201ENST00000210060 1363 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
PDGFAP04085 KIAA1211-206ENST00000541073 4117 ntAPPRIS ALT2 TSL 1 (best) BASIC14.64□□□□□ -0.07
PDGFAP04085 C16orf54-201ENST00000329410 2585 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
PDGFAP04085 SHROOM1-201ENST00000319854 3190 ntAPPRIS P3 TSL 1 (best) BASIC14.64□□□□□ -0.07
PDGFAP04085 COL5A1-201ENST00000371817 8471 ntAPPRIS P3 TSL 1 (best) BASIC14.64□□□□□ -0.07
PDGFAP04085 GRAMD4-203ENST00000408031 2834 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
PDGFAP04085 CYP2R1-201ENST00000334636 2235 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
PDGFAP04085 KPNA2-202ENST00000537025 2456 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
PDGFAP04085 GNAO1-201ENST00000262493 3337 ntAPPRIS P5 TSL 1 (best) BASIC14.64□□□□□ -0.07
PDGFAP04085 PLCB1-203ENST00000378641 7323 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
PDGFAP04085 TNRC18P2-201ENST00000417666 2714 ntBASIC14.64□□□□□ -0.07
PDGFAP04085 NINJ2-201ENST00000305108 1252 ntAPPRIS P3 TSL 1 (best) BASIC14.64□□□□□ -0.07
PDGFAP04085 GSTO1-201ENST00000369710 900 ntTSL 2 BASIC14.64□□□□□ -0.07
PDGFAP04085 PPDPF-201ENST00000370177 627 ntTSL 2 BASIC14.64□□□□□ -0.07
PDGFAP04085 EDN2-201ENST00000372587 1241 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
PDGFAP04085 DBNDD2-208ENST00000372723 1118 ntAPPRIS P1 TSL 2 BASIC14.64□□□□□ -0.07
PDGFAP04085 MS4A13-201ENST00000378185 808 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
PDGFAP04085 MDP1-202ENST00000396833 582 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
PDGFAP04085 MORN2-204ENST00000409665 648 ntAPPRIS P1 TSL 5 BASIC14.64□□□□□ -0.07
PDGFAP04085 AZGP1P1-201ENST00000411909 902 ntBASIC14.64□□□□□ -0.07
PDGFAP04085 AC074338.1-201ENST00000416825 156 ntBASIC14.64□□□□□ -0.07
PDGFAP04085 LNCPRESS1-201ENST00000429254 756 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
PDGFAP04085 AL442647.2-201ENST00000429864 857 ntBASIC14.64□□□□□ -0.07
PDGFAP04085 ACTG1P3-201ENST00000431775 1114 ntBASIC14.64□□□□□ -0.07
PDGFAP04085 AL162726.2-201ENST00000438986 1017 ntBASIC14.64□□□□□ -0.07
PDGFAP04085 RPL13P2-201ENST00000440687 659 ntBASIC14.64□□□□□ -0.07
PDGFAP04085 BCRP2-202ENST00000447763 634 ntBASIC14.64□□□□□ -0.07
PDGFAP04085 AL121845.2-201ENST00000467211 252 ntAPPRIS P1 TSL 3 BASIC14.64□□□□□ -0.07
PDGFAP04085 GFM1-208ENST00000478576 2147 ntTSL 2 BASIC14.64□□□□□ -0.07
PDGFAP04085 BCRP6-201ENST00000510112 632 ntBASIC14.64□□□□□ -0.07
PDGFAP04085 BCRP7-201ENST00000511549 544 ntBASIC14.64□□□□□ -0.07
PDGFAP04085 OSGIN2-203ENST00000520659 801 ntTSL 2 BASIC14.64□□□□□ -0.07
PDGFAP04085 SUOX-214ENST00000551841 906 ntTSL 3 BASIC14.64□□□□□ -0.07
PDGFAP04085 AC009065.5-201ENST00000565937 596 ntTSL 3 BASIC14.64□□□□□ -0.07
PDGFAP04085 LINC01887-202ENST00000584734 860 ntTSL 3 BASIC14.64□□□□□ -0.07
PDGFAP04085 AC010326.2-201ENST00000602124 1020 ntAPPRIS P1 TSL 3 BASIC14.64□□□□□ -0.07
PDGFAP04085 AC133539.2-201ENST00000604757 467 ntBASIC14.64□□□□□ -0.07
PDGFAP04085 DMPK-202ENST00000343373 3227 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
PDGFAP04085 IDH3B-201ENST00000380843 1545 ntAPPRIS P4 TSL 1 (best) BASIC14.64□□□□□ -0.07
PDGFAP04085 CACNA1A-221ENST00000636012 7500 ntAPPRIS ALT2 TSL 5 BASIC14.64□□□□□ -0.07
PDGFAP04085 EHD2-202ENST00000538399 1766 ntTSL 2 BASIC14.64□□□□□ -0.07
PDGFAP04085 PAX4-202ENST00000341640 2010 ntAPPRIS P2 TSL 1 (best) BASIC14.64□□□□□ -0.07
PDGFAP04085 CIART-203ENST00000369095 1433 ntAPPRIS P3 TSL 1 (best) BASIC14.64□□□□□ -0.07
PDGFAP04085 PLSCR4-204ENST00000446574 1442 ntAPPRIS P1 TSL 2 BASIC14.64□□□□□ -0.07
PDGFAP04085 LENG8-208ENST00000610347 5789 ntAPPRIS ALT2 TSL 5 BASIC14.64□□□□□ -0.07
PDGFAP04085 GIT2-220ENST00000553118 2424 ntTSL 5 BASIC14.64□□□□□ -0.07
PDGFAP04085 MAP4K1-208ENST00000589130 2654 ntTSL 5 BASIC14.64□□□□□ -0.07
PDGFAP04085 STAT5A-211ENST00000590949 3318 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
PDGFAP04085 EWSR1-203ENST00000332050 2552 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
PDGFAP04085 ADCY7-203ENST00000537579 2090 ntTSL 5 BASIC14.64□□□□□ -0.07
PDGFAP04085 ABHD3-209ENST00000580981 1836 ntTSL 5 BASIC14.64□□□□□ -0.07
PDGFAP04085 PSMC5-209ENST00000580864 1552 ntTSL 5 BASIC14.64□□□□□ -0.07
PDGFAP04085 TBC1D9B-201ENST00000355235 5119 ntAPPRIS P3 TSL 5 BASIC14.64□□□□□ -0.07
PDGFAP04085 SLC30A4-201ENST00000261867 7157 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
PDGFAP04085 DIAPH2-204ENST00000373054 3376 ntAPPRIS ALT2 TSL 5 BASIC14.64□□□□□ -0.07
PDGFAP04085 GNAS-212ENST00000371098 1719 ntTSL 5 BASIC14.63□□□□□ -0.07
PDGFAP04085 TBP-206ENST00000540980 1701 ntAPPRIS ALT2 TSL 2 BASIC14.63□□□□□ -0.07
PDGFAP04085 UVSSA-208ENST00000511563 1494 ntAPPRIS ALT2 TSL 2 BASIC14.63□□□□□ -0.07
PDGFAP04085 TUBB6-211ENST00000591208 1492 ntTSL 5 BASIC14.63□□□□□ -0.07
PDGFAP04085 NFATC1-218ENST00000592223 2531 ntAPPRIS ALT2 TSL 1 (best) BASIC14.63□□□□□ -0.07
PDGFAP04085 PRR19-204ENST00000598490 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC14.63□□□□□ -0.07
PDGFAP04085 ASAH1-240ENST00000636997 1774 ntTSL 5 BASIC14.63□□□□□ -0.07
PDGFAP04085 PPM1E-201ENST00000308249 6542 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
PDGFAP04085 NBEA-201ENST00000310336 10794 ntAPPRIS ALT1 TSL 1 (best) BASIC14.63□□□□□ -0.07
PDGFAP04085 NBEA-208ENST00000629018 10791 ntAPPRIS ALT1 TSL 5 BASIC14.63□□□□□ -0.07
PDGFAP04085 CNGB1-201ENST00000251102 5641 ntAPPRIS P3 TSL 1 (best) BASIC14.63□□□□□ -0.07
PDGFAP04085 ULK4-203ENST00000420927 1904 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
PDGFAP04085 TNFRSF14-AS1-201ENST00000416860 3522 ntTSL 2 BASIC14.63□□□□□ -0.07
PDGFAP04085 CDIP1-209ENST00000567695 2062 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
PDGFAP04085 ETFB-201ENST00000309244 900 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
PDGFAP04085 TAGLN-202ENST00000392951 928 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
PDGFAP04085 RABL2A-203ENST00000393166 1052 ntAPPRIS P3 TSL 1 (best) BASIC14.63□□□□□ -0.07
PDGFAP04085 SPEG-202ENST00000396686 1086 ntTSL 3 BASIC14.63□□□□□ -0.07
PDGFAP04085 NME6-203ENST00000415644 849 ntTSL 2 BASIC14.63□□□□□ -0.07
PDGFAP04085 CSF2RBP1-201ENST00000447905 391 ntBASIC14.63□□□□□ -0.07
PDGFAP04085 AC093904.1-201ENST00000474561 455 ntTSL 3 BASIC14.63□□□□□ -0.07
PDGFAP04085 PKD2-202ENST00000502363 1222 ntTSL 5 BASIC14.63□□□□□ -0.07
PDGFAP04085 AC009686.1-201ENST00000522494 364 ntTSL 3 BASIC14.63□□□□□ -0.07
PDGFAP04085 LINC01220-201ENST00000558575 715 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
PDGFAP04085 KISS1-202ENST00000625357 435 ntAPPRIS ALT2 TSL 5 BASIC14.63□□□□□ -0.07
PDGFAP04085 DYNC1LI1-204ENST00000432458 1827 ntTSL 2 BASIC14.63□□□□□ -0.07
PDGFAP04085 ADGRB2-203ENST00000398538 4675 ntAPPRIS ALT2 TSL 5 BASIC14.63□□□□□ -0.07
PDGFAP04085 LINGO1-201ENST00000355300 3055 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
PDGFAP04085 FOXP3-202ENST00000376199 2274 ntTSL 2 BASIC14.63□□□□□ -0.07
PDGFAP04085 SLC35A1-202ENST00000369556 1720 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
PDGFAP04085 TRIM27-202ENST00000377199 2967 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
PDGFAP04085 ESR2-209ENST00000555278 1883 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
PDGFAP04085 MOB3B-201ENST00000262244 6454 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
PDGFAP04085 PDE4C-207ENST00000594617 4655 ntAPPRIS P3 TSL 1 (best) BASIC14.63□□□□□ -0.07
PDGFAP04085 ESPNL-201ENST00000343063 4836 ntAPPRIS P1 TSL 2 BASIC14.63□□□□□ -0.07
PDGFAP04085 EIF4G1-202ENST00000346169 5516 ntAPPRIS P3 TSL 1 (best) BASIC14.63□□□□□ -0.07
Retrieved 100 of 98,524 protein–RNA pairs in 43.3 ms