Protein–RNA interactions for Protein: P00352

ALDH1A1, Retinal dehydrogenase 1, humanhuman

Predictions only

Length 501 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ALDH1A1P00352 TMEM179-205ENST00000615704 636 ntTSL 2 BASIC17.49■□□□□ 0.39
ALDH1A1P00352 CNOT7-213ENST00000628418 432 ntTSL 5 BASIC17.49■□□□□ 0.39
ALDH1A1P00352 ZNF451-203ENST00000370706 5268 ntAPPRIS ALT2 TSL 1 (best) BASIC17.49■□□□□ 0.39
ALDH1A1P00352 IL12RB2-202ENST00000371000 2454 ntTSL 2 BASIC17.49■□□□□ 0.39
ALDH1A1P00352 MPDU1-201ENST00000250124 1601 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
ALDH1A1P00352 AC009802.1-201ENST00000637973 1609 ntTSL 5 BASIC17.49■□□□□ 0.39
ALDH1A1P00352 TESMIN-201ENST00000255087 2579 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
ALDH1A1P00352 PUDP-202ENST00000412827 1376 ntTSL 2 BASIC17.49■□□□□ 0.39
ALDH1A1P00352 ZNF514-201ENST00000295208 3011 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
ALDH1A1P00352 C2orf81-206ENST00000640868 2407 ntAPPRIS ALT2 BASIC17.49■□□□□ 0.39
ALDH1A1P00352 DARS-201ENST00000264161 2361 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
ALDH1A1P00352 TSC22D4-201ENST00000300181 2383 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
ALDH1A1P00352 PLA1A-205ENST00000494440 1775 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
ALDH1A1P00352 AC020916.1-201ENST00000587762 1774 ntBASIC17.48■□□□□ 0.39
ALDH1A1P00352 DDOST-206ENST00000602624 1963 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
ALDH1A1P00352 ZNF232-201ENST00000250076 2179 ntAPPRIS P3 TSL 5 BASIC17.48■□□□□ 0.39
ALDH1A1P00352 AC026688.2-201ENST00000518984 1734 ntTSL 3 BASIC17.48■□□□□ 0.39
ALDH1A1P00352 CRB3-201ENST00000308243 631 ntAPPRIS ALT2 TSL 2 BASIC17.48■□□□□ 0.39
ALDH1A1P00352 FGF14-202ENST00000376143 744 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
ALDH1A1P00352 ETV2-201ENST00000379023 926 ntAPPRIS ALT2 TSL 1 (best) BASIC17.48■□□□□ 0.39
ALDH1A1P00352 C2orf15-202ENST00000409684 1058 ntAPPRIS P1 TSL 3 BASIC17.48■□□□□ 0.39
ALDH1A1P00352 LINC01388-201ENST00000416242 416 ntTSL 3 BASIC17.48■□□□□ 0.39
ALDH1A1P00352 ZNF124-206ENST00000543802 1292 ntAPPRIS ALT2 TSL 1 (best) BASIC17.48■□□□□ 0.39
ALDH1A1P00352 SAMD11P1-201ENST00000571429 661 ntBASIC17.48■□□□□ 0.39
ALDH1A1P00352 AC103808.5-201ENST00000577797 462 ntTSL 3 BASIC17.48■□□□□ 0.39
ALDH1A1P00352 NAT9-211ENST00000580632 799 ntTSL 3 BASIC17.48■□□□□ 0.39
ALDH1A1P00352 RPL19-207ENST00000582193 792 ntAPPRIS ALT1 TSL 5 BASIC17.48■□□□□ 0.39
ALDH1A1P00352 IMPA2-207ENST00000588927 787 ntTSL 5 BASIC17.48■□□□□ 0.39
ALDH1A1P00352 YRDCP1-201ENST00000621419 643 ntBASIC17.48■□□□□ 0.39
ALDH1A1P00352 LGI4-201ENST00000310123 2814 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
ALDH1A1P00352 CBS-202ENST00000359624 2353 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
ALDH1A1P00352 CBSL-203ENST00000618024 2353 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
ALDH1A1P00352 NRG2-205ENST00000361474 3020 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
ALDH1A1P00352 TOB1-AS1-201ENST00000416263 1351 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
ALDH1A1P00352 MOGS-205ENST00000452063 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC17.48■□□□□ 0.39
ALDH1A1P00352 GPN3-201ENST00000228827 1468 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
ALDH1A1P00352 CCDC121-202ENST00000394775 1472 ntAPPRIS ALT2 TSL 1 (best) BASIC17.48■□□□□ 0.39
ALDH1A1P00352 PGAP2-205ENST00000396993 1566 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
ALDH1A1P00352 HSD17B6-205ENST00000554643 1751 ntAPPRIS P1 TSL 5 BASIC17.48■□□□□ 0.39
ALDH1A1P00352 AC055811.4-201ENST00000624039 1754 ntBASIC17.48■□□□□ 0.39
ALDH1A1P00352 NCOA6-207ENST00000616167 3271 ntAPPRIS ALT2 TSL 5 BASIC17.48■□□□□ 0.39
ALDH1A1P00352 LAMC1-201ENST00000258341 7889 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
ALDH1A1P00352 COBL-201ENST00000265136 5291 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
ALDH1A1P00352 FFAR2-201ENST00000246549 2051 ntAPPRIS P1 BASIC17.48■□□□□ 0.39
ALDH1A1P00352 FKBP4P6-201ENST00000457486 1332 ntBASIC17.47■□□□□ 0.39
ALDH1A1P00352 ZFP3-201ENST00000318833 5206 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
ALDH1A1P00352 TMPRSS9-205ENST00000613480 2568 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
ALDH1A1P00352 C8orf33-201ENST00000331434 2677 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
ALDH1A1P00352 PLCD3-212ENST00000619929 6107 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
ALDH1A1P00352 ZSCAN32-205ENST00000439568 1746 ntTSL 2 BASIC17.47■□□□□ 0.39
ALDH1A1P00352 POLD3-208ENST00000532497 1700 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
ALDH1A1P00352 HPCAL1-202ENST00000381765 1904 ntAPPRIS P1 TSL 2 BASIC17.47■□□□□ 0.39
ALDH1A1P00352 HPCAL1-207ENST00000620771 1941 ntAPPRIS P1 TSL 2 BASIC17.47■□□□□ 0.39
ALDH1A1P00352 SMIM25-203ENST00000425497 2010 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
ALDH1A1P00352 AC226118.1-201ENST00000515213 2146 ntTSL 2 BASIC17.47■□□□□ 0.39
ALDH1A1P00352 NIM1K-201ENST00000326035 2313 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
ALDH1A1P00352 LTBP2-205ENST00000556690 5614 ntAPPRIS ALT2 TSL 5 BASIC17.47■□□□□ 0.39
ALDH1A1P00352 ZNF618-203ENST00000374126 3018 ntAPPRIS ALT2 TSL 1 (best) BASIC17.47■□□□□ 0.39
ALDH1A1P00352 CNTNAP3-201ENST00000297668 5064 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
ALDH1A1P00352 AC239868.1-201ENST00000369385 493 ntBASIC17.47■□□□□ 0.39
ALDH1A1P00352 CRYBB3-202ENST00000404334 601 ntTSL 3 BASIC17.47■□□□□ 0.39
ALDH1A1P00352 ERBB3-202ENST00000411731 1027 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
ALDH1A1P00352 AC092800.1-201ENST00000449492 579 ntTSL 2 BASIC17.47■□□□□ 0.39
ALDH1A1P00352 MAATS1-203ENST00000463700 939 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
ALDH1A1P00352 AC130709.1-201ENST00000484779 1212 ntBASIC17.47■□□□□ 0.39
ALDH1A1P00352 AC022858.1-201ENST00000521685 685 ntTSL 3 BASIC17.47■□□□□ 0.39
ALDH1A1P00352 CCNC-217ENST00000523985 958 ntTSL 2 BASIC17.47■□□□□ 0.39
ALDH1A1P00352 AC138230.1-201ENST00000525893 664 ntTSL 5 BASIC17.47■□□□□ 0.39
ALDH1A1P00352 ERVK13-1-204ENST00000566343 567 ntTSL 4 BASIC17.47■□□□□ 0.39
ALDH1A1P00352 PAM16-211ENST00000575848 518 ntTSL 3 BASIC17.47■□□□□ 0.39
ALDH1A1P00352 PAM16-214ENST00000576217 493 ntAPPRIS P1 TSL 5 BASIC17.47■□□□□ 0.39
ALDH1A1P00352 MIR4783-201ENST00000580343 82 ntBASIC17.47■□□□□ 0.39
ALDH1A1P00352 MIR4649-201ENST00000582839 64 ntBASIC17.47■□□□□ 0.39
ALDH1A1P00352 TMEM220-AS1-207ENST00000584714 541 ntTSL 4 BASIC17.47■□□□□ 0.39
ALDH1A1P00352 AC011472.1-201ENST00000588634 569 ntTSL 4 BASIC17.47■□□□□ 0.39
ALDH1A1P00352 HIST2H2BB-202ENST00000609585 563 ntTSL 2 BASIC17.47■□□□□ 0.39
ALDH1A1P00352 FAM90A2P-201ENST00000511144 1395 ntBASIC17.47■□□□□ 0.39
ALDH1A1P00352 FAM90A25P-201ENST00000528404 1395 ntBASIC17.47■□□□□ 0.39
ALDH1A1P00352 AC068880.1-201ENST00000507289 2297 ntBASIC17.47■□□□□ 0.39
ALDH1A1P00352 PCK2-205ENST00000558096 2433 ntTSL 2 BASIC17.47■□□□□ 0.39
ALDH1A1P00352 SHMT2-202ENST00000414700 2006 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
ALDH1A1P00352 ZNF324-203ENST00000536459 5653 ntAPPRIS P1 TSL 2 BASIC17.47■□□□□ 0.39
ALDH1A1P00352 PCOLCE-201ENST00000223061 1702 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
ALDH1A1P00352 SHC1P1-201ENST00000425230 1745 ntBASIC17.47■□□□□ 0.39
ALDH1A1P00352 PTP4A1-201ENST00000370651 5088 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
ALDH1A1P00352 FKBP6-201ENST00000252037 1500 ntAPPRIS P3 TSL 1 (best) BASIC17.47■□□□□ 0.39
ALDH1A1P00352 SCGN-203ENST00000612225 1402 ntTSL 5 BASIC17.47■□□□□ 0.39
ALDH1A1P00352 KLK11-207ENST00000594768 1347 ntAPPRIS P4 TSL 1 (best) BASIC17.47■□□□□ 0.39
ALDH1A1P00352 ZMIZ1-201ENST00000334512 7546 ntAPPRIS P1 TSL 5 BASIC17.46■□□□□ 0.39
ALDH1A1P00352 OBSL1-201ENST00000289656 2274 ntTSL 5 BASIC17.46■□□□□ 0.39
ALDH1A1P00352 CCT4-204ENST00000544079 2261 ntTSL 2 BASIC17.46■□□□□ 0.39
ALDH1A1P00352 AC006449.6-201ENST00000612330 2296 ntBASIC17.46■□□□□ 0.39
ALDH1A1P00352 SENP6-205ENST00000447266 6501 ntAPPRIS ALT2 TSL 1 (best) BASIC17.46■□□□□ 0.39
ALDH1A1P00352 ADK-202ENST00000372734 2083 ntAPPRIS ALT1 TSL 1 (best) BASIC17.46■□□□□ 0.39
ALDH1A1P00352 LLGL2-201ENST00000167462 3480 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
ALDH1A1P00352 ACSF3-204ENST00000406948 2247 ntAPPRIS P1 TSL 2 BASIC17.46■□□□□ 0.39
ALDH1A1P00352 EPN2-201ENST00000314728 4871 ntAPPRIS P4 TSL 1 (best) BASIC17.46■□□□□ 0.39
ALDH1A1P00352 PSMB10-201ENST00000358514 1218 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
ALDH1A1P00352 GEMIN7-202ENST00000391951 716 ntAPPRIS P1 TSL 2 BASIC17.46■□□□□ 0.39
ALDH1A1P00352 NPPC-202ENST00000409852 1051 ntAPPRIS P1 TSL 3 BASIC17.46■□□□□ 0.39
Retrieved 100 of 98,524 protein–RNA pairs in 40.8 ms