Protein–RNA interactions for Protein: O43909

EXTL3, Exostosin-like 3, humanhuman

Predictions only

Length 919 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EXTL3O43909 DERL3-204ENST00000406855 1063 ntAPPRIS ALT2 TSL 1 (best) BASIC16.84■□□□□ 0.29
EXTL3O43909 AC026774.1-201ENST00000503652 691 ntTSL 3 BASIC16.84■□□□□ 0.29
EXTL3O43909 ATG10-207ENST00000513443 978 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
EXTL3O43909 GCHFR-204ENST00000559445 626 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
EXTL3O43909 AC120045.2-201ENST00000567334 178 ntBASIC16.84■□□□□ 0.29
EXTL3O43909 MRPS23-202ENST00000578444 580 ntTSL 2 BASIC16.84■□□□□ 0.29
EXTL3O43909 SNHG15-207ENST00000582727 1039 ntTSL 2 BASIC16.84■□□□□ 0.29
EXTL3O43909 SMIM22-202ENST00000586440 549 ntAPPRIS P4 TSL 1 (best) BASIC16.84■□□□□ 0.29
EXTL3O43909 ZNF83-215ENST00000600714 810 ntTSL 3 BASIC16.84■□□□□ 0.29
EXTL3O43909 AL359881.2-201ENST00000602973 570 ntBASIC16.84■□□□□ 0.29
EXTL3O43909 AC107373.2-201ENST00000607735 490 ntBASIC16.84■□□□□ 0.29
EXTL3O43909 LINC01663-201ENST00000614596 535 ntTSL 5 BASIC16.84■□□□□ 0.29
EXTL3O43909 SEPT11-203ENST00000502584 2615 ntAPPRIS ALT1 TSL 5 BASIC16.84■□□□□ 0.29
EXTL3O43909 GHDC-201ENST00000301671 2650 ntAPPRIS P1 TSL 2 BASIC16.84■□□□□ 0.29
EXTL3O43909 MGAT1-201ENST00000307826 2761 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
EXTL3O43909 SYBU-209ENST00000446070 2919 ntAPPRIS P4 TSL 1 (best) BASIC16.84■□□□□ 0.29
EXTL3O43909 KTN1-AS1-201ENST00000335142 1465 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
EXTL3O43909 ZC2HC1C-202ENST00000439583 1509 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
EXTL3O43909 ADGRA1-AS1-201ENST00000366099 3236 ntBASIC16.84■□□□□ 0.29
EXTL3O43909 PIKFYVE-202ENST00000308862 1640 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
EXTL3O43909 AAAS-217ENST00000550286 1652 ntTSL 5 BASIC16.84■□□□□ 0.29
EXTL3O43909 PDZD4-202ENST00000393758 3763 ntAPPRIS ALT2 TSL 1 (best) BASIC16.84■□□□□ 0.29
EXTL3O43909 IL12RB2-205ENST00000541374 3849 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
EXTL3O43909 AL162457.1-201ENST00000317652 2000 ntTSL 2 BASIC16.84■□□□□ 0.29
EXTL3O43909 ORMDL3-204ENST00000579695 2106 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
EXTL3O43909 ETV5-206ENST00000434744 2213 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
EXTL3O43909 AC126177.1-201ENST00000547829 2218 ntBASIC16.84■□□□□ 0.29
EXTL3O43909 ASAH1-249ENST00000637528 2215 ntTSL 5 BASIC16.84■□□□□ 0.29
EXTL3O43909 RBCK1-201ENST00000353660 2511 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
EXTL3O43909 UVSSA-206ENST00000507531 2597 ntAPPRIS P2 TSL 1 (best) BASIC16.84■□□□□ 0.29
EXTL3O43909 CICP11-201ENST00000434745 2827 ntBASIC16.83■□□□□ 0.29
EXTL3O43909 NRBP1-201ENST00000233557 2887 ntAPPRIS P1 TSL 2 BASIC16.83■□□□□ 0.29
EXTL3O43909 RUNX1-201ENST00000300305 6222 ntAPPRIS P3 TSL 1 (best) BASIC16.83■□□□□ 0.29
EXTL3O43909 NEO1-201ENST00000261908 7088 ntAPPRIS P3 TSL 1 (best) BASIC16.83■□□□□ 0.29
EXTL3O43909 SMAD3-201ENST00000327367 6247 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.29
EXTL3O43909 SLC27A6-201ENST00000262462 3219 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
EXTL3O43909 CD81-201ENST00000263645 1520 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
EXTL3O43909 ORAOV1-201ENST00000279147 2478 ntAPPRIS P2 TSL 1 (best) BASIC16.83■□□□□ 0.28
EXTL3O43909 SCAND1-201ENST00000305978 902 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
EXTL3O43909 CASP2-201ENST00000310447 4225 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
EXTL3O43909 ZNF662-201ENST00000328199 3186 ntAPPRIS P1 TSL 5 BASIC16.83■□□□□ 0.28
EXTL3O43909 TBXAS1-201ENST00000336425 2185 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
EXTL3O43909 LIMS1-202ENST00000338045 1876 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
EXTL3O43909 MAEL-201ENST00000367870 1831 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
EXTL3O43909 WDR45-208ENST00000396681 1146 ntTSL 5 BASIC16.83■□□□□ 0.28
EXTL3O43909 CHRFAM7A-203ENST00000401522 1913 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
EXTL3O43909 MPPED1-202ENST00000417669 3657 ntAPPRIS P1 TSL 5 BASIC16.83■□□□□ 0.28
EXTL3O43909 THPO-202ENST00000421442 1132 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
EXTL3O43909 ARHGEF26-AS1-201ENST00000467912 628 ntTSL 3 BASIC16.83■□□□□ 0.28
EXTL3O43909 NAA50-208ENST00000497255 789 ntTSL 5 BASIC16.83■□□□□ 0.28
EXTL3O43909 AC113383.1-201ENST00000514696 582 ntTSL 4 BASIC16.83■□□□□ 0.28
EXTL3O43909 CCDC25-209ENST00000522915 785 ntTSL 3 BASIC16.83■□□□□ 0.28
EXTL3O43909 PRKAG3-206ENST00000529249 2222 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
EXTL3O43909 AC008750.2-202ENST00000532688 729 ntTSL 3 BASIC16.83■□□□□ 0.28
EXTL3O43909 SLC8B1-206ENST00000549069 1058 ntTSL 2 BASIC16.83■□□□□ 0.28
EXTL3O43909 UNC13A-204ENST00000550896 5200 ntAPPRIS ALT2 TSL 5 BASIC16.83■□□□□ 0.28
EXTL3O43909 HSD17B6-206ENST00000555159 1525 ntAPPRIS P1 TSL 5 BASIC16.83■□□□□ 0.28
EXTL3O43909 AL359711.2-201ENST00000563105 872 ntBASIC16.83■□□□□ 0.28
EXTL3O43909 AC124283.3-201ENST00000570869 594 ntBASIC16.83■□□□□ 0.28
EXTL3O43909 MIF4GD-206ENST00000579119 856 ntTSL 3 BASIC16.83■□□□□ 0.28
EXTL3O43909 AC008758.5-201ENST00000595562 617 ntAPPRIS P1 TSL 4 BASIC16.83■□□□□ 0.28
EXTL3O43909 AC093813.1-201ENST00000605066 256 ntBASIC16.83■□□□□ 0.28
EXTL3O43909 AC148477.4-201ENST00000613430 1793 ntBASIC16.83■□□□□ 0.28
EXTL3O43909 YTHDF3-212ENST00000621413 2370 ntTSL 5 BASIC16.83■□□□□ 0.28
EXTL3O43909 KISS1-202ENST00000625357 435 ntAPPRIS ALT2 TSL 5 BASIC16.83■□□□□ 0.28
EXTL3O43909 ELAVL3-201ENST00000359227 4729 ntAPPRIS P3 TSL 3 BASIC16.83■□□□□ 0.28
EXTL3O43909 STAC-201ENST00000273183 3227 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
EXTL3O43909 NRCAM-217ENST00000613830 3025 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
EXTL3O43909 MYEF2-201ENST00000267836 2958 ntAPPRIS ALT2 TSL 1 (best) BASIC16.83■□□□□ 0.28
EXTL3O43909 WDR81-206ENST00000446363 2968 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
EXTL3O43909 NFIC-211ENST00000641145 8399 ntBASIC16.83■□□□□ 0.28
EXTL3O43909 EEPD1-205ENST00000534978 2769 ntAPPRIS P1 TSL 2 BASIC16.83■□□□□ 0.28
EXTL3O43909 ATP6V0A1-204ENST00000537728 2774 ntTSL 2 BASIC16.83■□□□□ 0.28
EXTL3O43909 AC138035.3-201ENST00000622706 2791 ntBASIC16.83■□□□□ 0.28
EXTL3O43909 ADARB1-202ENST00000360697 6604 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
EXTL3O43909 AL109954.1-202ENST00000564051 2148 ntBASIC16.82■□□□□ 0.28
EXTL3O43909 CHSY3-201ENST00000305031 3850 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
EXTL3O43909 BPIFB2-201ENST00000170150 1898 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
EXTL3O43909 GOLGA8H-201ENST00000566740 1899 ntAPPRIS P1 TSL 5 BASIC16.82■□□□□ 0.28
EXTL3O43909 GOLGA8J-201ENST00000567927 1899 ntAPPRIS P1 TSL 5 BASIC16.82■□□□□ 0.28
EXTL3O43909 CACNA2D3-201ENST00000288197 3671 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
EXTL3O43909 CACNA2D3-206ENST00000474759 3675 ntAPPRIS P2 TSL 1 (best) BASIC16.82■□□□□ 0.28
EXTL3O43909 PPOX-201ENST00000352210 1686 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
EXTL3O43909 HYMAI-201ENST00000635591 3347 ntBASIC16.82■□□□□ 0.28
EXTL3O43909 ECHDC2-203ENST00000371522 1509 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
EXTL3O43909 GRAMD1C-201ENST00000358160 4177 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
EXTL3O43909 HNRNPA1P48-201ENST00000562726 1377 ntBASIC16.82■□□□□ 0.28
EXTL3O43909 B3GNT4-206ENST00000546192 2749 ntAPPRIS P1 TSL 2 BASIC16.82■□□□□ 0.28
EXTL3O43909 CYB5R2-204ENST00000524790 1338 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
EXTL3O43909 ANKMY2-201ENST00000306999 2555 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
EXTL3O43909 C12orf10-201ENST00000267103 1192 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
EXTL3O43909 TOMM5-201ENST00000321301 751 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
EXTL3O43909 FKBP1B-201ENST00000380986 952 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
EXTL3O43909 C1QBPP1-201ENST00000400117 770 ntBASIC16.82■□□□□ 0.28
EXTL3O43909 SYNGR1-205ENST00000406293 564 ntTSL 2 BASIC16.82■□□□□ 0.28
EXTL3O43909 GHSR-202ENST00000427970 912 ntBASIC16.82■□□□□ 0.28
EXTL3O43909 HNRNPA1P13-201ENST00000510646 963 ntBASIC16.82■□□□□ 0.28
EXTL3O43909 SDR39U1-212ENST00000555365 976 ntTSL 3 BASIC16.82■□□□□ 0.28
EXTL3O43909 AL132639.3-201ENST00000556537 530 ntTSL 4 BASIC16.82■□□□□ 0.28
EXTL3O43909 AC090825.1-203ENST00000558188 582 ntTSL 3 BASIC16.82■□□□□ 0.28
Retrieved 100 of 98,524 protein–RNA pairs in 40.8 ms