Protein–RNA interactions for Protein: A7MD48

SRRM4, Serine/arginine repetitive matrix protein 4, humanhuman

Known RBP Predictions only

Length 611 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SRRM4A7MD48 SLBP-205ENST00000488267 987 ntTSL 2 BASIC12.57□□□□□ -0.4
SRRM4A7MD48 ZNF606-202ENST00000546715 636 ntTSL 4 BASIC12.57□□□□□ -0.4
SRRM4A7MD48 AC012617.1-203ENST00000590845 439 ntTSL 2 BASIC12.57□□□□□ -0.4
SRRM4A7MD48 WNT1-202ENST00000613114 1278 ntTSL 5 BASIC12.57□□□□□ -0.4
SRRM4A7MD48 AL138828.2-201ENST00000615812 383 ntBASIC12.57□□□□□ -0.4
SRRM4A7MD48 MALAT1-213ENST00000618227 593 ntTSL 3 BASIC12.57□□□□□ -0.4
SRRM4A7MD48 SPDYE12P-201ENST00000618416 771 ntBASIC12.57□□□□□ -0.4
SRRM4A7MD48 LAP3-211ENST00000618908 2100 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
SRRM4A7MD48 AF228730.6-201ENST00000641497 218 ntBASIC12.57□□□□□ -0.4
SRRM4A7MD48 AC084121.3-201ENST00000641716 218 ntBASIC12.57□□□□□ -0.4
SRRM4A7MD48 FAM45BP-202ENST00000592932 1624 ntBASIC12.57□□□□□ -0.4
SRRM4A7MD48 TMEM5-205ENST00000537373 1966 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
SRRM4A7MD48 CARMIL3-201ENST00000342740 4597 ntAPPRIS P1 TSL 5 BASIC12.57□□□□□ -0.4
SRRM4A7MD48 TRAPPC11-202ENST00000357207 4435 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
SRRM4A7MD48 COL5A1-201ENST00000371817 8471 ntAPPRIS P3 TSL 1 (best) BASIC12.57□□□□□ -0.4
SRRM4A7MD48 FADS2-210ENST00000522056 1689 ntTSL 2 BASIC12.57□□□□□ -0.4
SRRM4A7MD48 GRAMD4P3-201ENST00000621665 1669 ntBASIC12.57□□□□□ -0.4
SRRM4A7MD48 TUBB3P1-201ENST00000405796 1332 ntBASIC12.57□□□□□ -0.4
SRRM4A7MD48 AC138517.2-201ENST00000637503 2594 ntAPPRIS P1 TSL 5 BASIC12.57□□□□□ -0.4
SRRM4A7MD48 VWA2-202ENST00000392982 2794 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
SRRM4A7MD48 CDPF1-204ENST00000404744 1541 ntTSL 3 BASIC12.57□□□□□ -0.4
SRRM4A7MD48 RAD51-201ENST00000267868 2449 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
SRRM4A7MD48 CSAD-202ENST00000379843 2086 ntTSL 5 BASIC12.57□□□□□ -0.4
SRRM4A7MD48 TAF6-209ENST00000452041 2297 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
SRRM4A7MD48 EIF4G1-209ENST00000414031 5569 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
SRRM4A7MD48 LEKR1-209ENST00000491763 1940 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
SRRM4A7MD48 BCL2L2-PABPN1-203ENST00000557008 1366 ntAPPRIS P1 TSL 5 BASIC12.56□□□□□ -0.4
SRRM4A7MD48 FO538757.1-201ENST00000623083 1397 ntBASIC12.56□□□□□ -0.4
SRRM4A7MD48 DMPK-202ENST00000343373 3227 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
SRRM4A7MD48 GUCD1-206ENST00000435822 3613 ntAPPRIS ALT1 TSL 1 (best) BASIC12.56□□□□□ -0.4
SRRM4A7MD48 NLGN4X-203ENST00000381093 5865 ntAPPRIS P2 TSL 2 BASIC12.56□□□□□ -0.4
SRRM4A7MD48 ME2-201ENST00000321341 9415 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
SRRM4A7MD48 CCDC90B-213ENST00000529611 1986 ntTSL 2 BASIC12.56□□□□□ -0.4
SRRM4A7MD48 LTBP2-201ENST00000261978 8567 ntAPPRIS P2 TSL 1 (best) BASIC12.56□□□□□ -0.4
SRRM4A7MD48 AC106881.1-201ENST00000605849 3329 ntBASIC12.56□□□□□ -0.4
SRRM4A7MD48 CHN2-201ENST00000222792 3530 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
SRRM4A7MD48 PI4K2B-201ENST00000264864 3540 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
SRRM4A7MD48 TJP2-212ENST00000636438 4689 ntAPPRIS ALT2 TSL 5 BASIC12.56□□□□□ -0.4
SRRM4A7MD48 CNST-203ENST00000366513 5126 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
SRRM4A7MD48 SYNGR2-207ENST00000590201 2239 ntTSL 5 BASIC12.56□□□□□ -0.4
SRRM4A7MD48 HGNC:18790-202ENST00000421177 4172 ntAPPRIS P1 TSL 5 BASIC12.56□□□□□ -0.4
SRRM4A7MD48 ALDH3B2-201ENST00000349015 2649 ntAPPRIS P1 TSL 5 BASIC12.56□□□□□ -0.4
SRRM4A7MD48 NMU-201ENST00000264218 816 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
SRRM4A7MD48 H2AFZ-201ENST00000296417 979 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
SRRM4A7MD48 PHF19-201ENST00000312189 836 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
SRRM4A7MD48 SERBP1P3-201ENST00000459980 809 ntBASIC12.56□□□□□ -0.4
SRRM4A7MD48 DUSP13-205ENST00000464872 684 ntTSL 3 BASIC12.56□□□□□ -0.4
SRRM4A7MD48 LINC01184-209ENST00000514573 609 ntTSL 3 BASIC12.56□□□□□ -0.4
SRRM4A7MD48 AC119403.1-201ENST00000520090 776 ntTSL 5 BASIC12.56□□□□□ -0.4
SRRM4A7MD48 NAALADL1-207ENST00000526799 959 ntTSL 5 BASIC12.56□□□□□ -0.4
SRRM4A7MD48 RAB26-202ENST00000541451 944 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
SRRM4A7MD48 AC004803.1-204ENST00000543290 512 ntTSL 4 BASIC12.56□□□□□ -0.4
SRRM4A7MD48 AL512361.1-201ENST00000554200 418 ntBASIC12.56□□□□□ -0.4
SRRM4A7MD48 CERNA1-201ENST00000559779 908 ntTSL 3 BASIC12.56□□□□□ -0.4
SRRM4A7MD48 TMEM101-204ENST00000587529 965 ntTSL 2 BASIC12.56□□□□□ -0.4
SRRM4A7MD48 LINC01775-201ENST00000587826 371 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
SRRM4A7MD48 KLK15-203ENST00000596931 692 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
SRRM4A7MD48 KLK15-204ENST00000598239 855 ntAPPRIS P3 TSL 1 (best) BASIC12.56□□□□□ -0.4
SRRM4A7MD48 DUSP13-212ENST00000605915 1015 ntTSL 5 BASIC12.56□□□□□ -0.4
SRRM4A7MD48 TEX28P1-201ENST00000613479 1221 ntBASIC12.56□□□□□ -0.4
SRRM4A7MD48 TEX28P2-201ENST00000617764 1221 ntBASIC12.56□□□□□ -0.4
SRRM4A7MD48 HOTAIRM1_1.1-201ENST00000622675 125 ntBASIC12.56□□□□□ -0.4
SRRM4A7MD48 OLA1-202ENST00000344357 1656 ntTSL 2 BASIC12.56□□□□□ -0.4
SRRM4A7MD48 MUTYH-206ENST00000372115 1888 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
SRRM4A7MD48 ANKRD20A5P-207ENST00000581935 2089 ntTSL 2 BASIC12.56□□□□□ -0.4
SRRM4A7MD48 NFE2L2-201ENST00000397062 2853 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
SRRM4A7MD48 CADPS2-205ENST00000449022 4073 ntTSL 5 BASIC12.56□□□□□ -0.4
SRRM4A7MD48 AC007326.2-201ENST00000624224 7579 ntBASIC12.56□□□□□ -0.4
SRRM4A7MD48 ZNF385A-201ENST00000338010 2331 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
SRRM4A7MD48 VTN-201ENST00000226218 2149 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
SRRM4A7MD48 ZNF7-218ENST00000544249 2125 ntTSL 2 BASIC12.56□□□□□ -0.4
SRRM4A7MD48 ZSCAN32-205ENST00000439568 1746 ntTSL 2 BASIC12.56□□□□□ -0.4
SRRM4A7MD48 SIGLEC8-203ENST00000430817 1528 ntTSL 2 BASIC12.56□□□□□ -0.4
SRRM4A7MD48 SFRP4-201ENST00000436072 2966 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
SRRM4A7MD48 ZNF628-203ENST00000598519 3847 ntAPPRIS P2 TSL 1 (best) BASIC12.56□□□□□ -0.4
SRRM4A7MD48 PTGES3L-AARSD1-204ENST00000421990 2150 ntAPPRIS P1 TSL 2 BASIC12.56□□□□□ -0.4
SRRM4A7MD48 GPSM1-205ENST00000440944 3633 ntAPPRIS P2 TSL 5 BASIC12.56□□□□□ -0.4
SRRM4A7MD48 ARHGAP39-201ENST00000276826 4697 ntAPPRIS ALT2 TSL 2 BASIC12.56□□□□□ -0.4
SRRM4A7MD48 FAM153B-220ENST00000515817 1966 ntAPPRIS P2 TSL 5 BASIC12.56□□□□□ -0.4
SRRM4A7MD48 HNRNPU-204ENST00000440865 3207 ntTSL 2 BASIC12.56□□□□□ -0.4
SRRM4A7MD48 MGEA5-201ENST00000357797 3263 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
SRRM4A7MD48 USP43-202ENST00000570475 3500 ntAPPRIS ALT2 TSL 1 (best) BASIC12.55□□□□□ -0.4
SRRM4A7MD48 FKBP5-201ENST00000357266 3772 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
SRRM4A7MD48 WASHC2C-208ENST00000537517 4417 ntAPPRIS ALT2 TSL 2 BASIC12.55□□□□□ -0.4
SRRM4A7MD48 LRCH3-202ENST00000414675 2299 ntAPPRIS ALT2 TSL 2 BASIC12.55□□□□□ -0.4
SRRM4A7MD48 MAPKAP1-201ENST00000265960 3395 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
SRRM4A7MD48 OSBP2-209ENST00000438716 2747 ntAPPRIS ALT2 TSL 2 BASIC12.55□□□□□ -0.4
SRRM4A7MD48 DEK-201ENST00000244776 1441 ntTSL 2 BASIC12.55□□□□□ -0.4
SRRM4A7MD48 ATG10-202ENST00000355178 1438 ntTSL 2 BASIC12.55□□□□□ -0.4
SRRM4A7MD48 OPA1-208ENST00000392438 6340 ntAPPRIS ALT1 TSL 1 (best) BASIC12.55□□□□□ -0.4
SRRM4A7MD48 C1orf228-219ENST00000535358 1685 ntAPPRIS P2 TSL 5 BASIC12.55□□□□□ -0.4
SRRM4A7MD48 MFF-204ENST00000353339 2186 ntTSL 5 BASIC12.55□□□□□ -0.4
SRRM4A7MD48 ZFPM2-201ENST00000407775 4700 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
SRRM4A7MD48 CLPP-201ENST00000245816 1155 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
SRRM4A7MD48 PDCD2L-201ENST00000246535 1171 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
SRRM4A7MD48 TAAR5-201ENST00000258034 1014 ntAPPRIS P1 BASIC12.55□□□□□ -0.4
SRRM4A7MD48 ZNF524-201ENST00000301073 1102 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
SRRM4A7MD48 TMEM52-201ENST00000310991 929 ntAPPRIS P2 TSL 1 (best) BASIC12.55□□□□□ -0.4
SRRM4A7MD48 TRA2B-202ENST00000342294 288 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
SRRM4A7MD48 EFNA4-201ENST00000359751 1096 ntAPPRIS ALT2 TSL 1 (best) BASIC12.55□□□□□ -0.4
Retrieved 100 of 98,524 protein–RNA pairs in 49.4 ms