Protein–RNA interactions for Protein: A6NEE1

PLEKHD1, Pleckstrin homology domain-containing family D member 1, humanhuman

Predictions only

Length 506 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PLEKHD1A6NEE1 ALPL-207ENST00000540617 2131 ntAPPRIS ALT2 TSL 2 BASIC23.55■■□□□ 1.36
PLEKHD1A6NEE1 AP003065.1-201ENST00000540912 562 ntTSL 4 BASIC23.55■■□□□ 1.36
PLEKHD1A6NEE1 SMIM24-203ENST00000587847 820 ntAPPRIS ALT2 TSL 1 (best) BASIC23.55■■□□□ 1.36
PLEKHD1A6NEE1 PYY-202ENST00000592796 580 ntAPPRIS ALT1 TSL 1 (best) BASIC23.55■■□□□ 1.36
PLEKHD1A6NEE1 AC020922.3-201ENST00000595064 547 ntBASIC23.55■■□□□ 1.36
PLEKHD1A6NEE1 AL136295.7-201ENST00000619226 1200 ntBASIC23.55■■□□□ 1.36
PLEKHD1A6NEE1 FES-207ENST00000444422 2266 ntTSL 1 (best) BASIC23.55■■□□□ 1.36
PLEKHD1A6NEE1 UQCC3-202ENST00000531323 2288 ntAPPRIS P1 TSL 3 BASIC23.55■■□□□ 1.36
PLEKHD1A6NEE1 AL355987.1-201ENST00000435202 2420 ntAPPRIS P1 TSL 2 BASIC23.55■■□□□ 1.36
PLEKHD1A6NEE1 SYNDIG1L-202ENST00000554823 2420 ntAPPRIS P1 TSL 3 BASIC23.55■■□□□ 1.36
PLEKHD1A6NEE1 TMEM119-201ENST00000392806 2707 ntAPPRIS P2 TSL 1 (best) BASIC23.55■■□□□ 1.36
PLEKHD1A6NEE1 COQ8A-201ENST00000366777 2872 ntAPPRIS P1 TSL 1 (best) BASIC23.55■■□□□ 1.36
PLEKHD1A6NEE1 GOLGA8H-201ENST00000566740 1899 ntAPPRIS P1 TSL 5 BASIC23.55■■□□□ 1.36
PLEKHD1A6NEE1 GOLGA8J-201ENST00000567927 1899 ntAPPRIS P1 TSL 5 BASIC23.55■■□□□ 1.36
PLEKHD1A6NEE1 PITPNC1-201ENST00000299954 6359 ntAPPRIS ALT2 TSL 5 BASIC23.55■■□□□ 1.36
PLEKHD1A6NEE1 FRA10AC1-201ENST00000359204 3089 ntAPPRIS P1 TSL 1 (best) BASIC23.55■■□□□ 1.36
PLEKHD1A6NEE1 ITGA7-201ENST00000257879 4120 ntAPPRIS P3 TSL 1 (best) BASIC23.55■■□□□ 1.36
PLEKHD1A6NEE1 SEC14L4-204ENST00000381982 1603 ntTSL 1 (best) BASIC23.55■■□□□ 1.36
PLEKHD1A6NEE1 SEPT11-206ENST00000505788 2079 ntAPPRIS ALT1 TSL 5 BASIC23.55■■□□□ 1.36
PLEKHD1A6NEE1 RWDD4-202ENST00000327570 2590 ntAPPRIS ALT1 TSL 3 BASIC23.54■■□□□ 1.36
PLEKHD1A6NEE1 CRKL-201ENST00000354336 5325 ntAPPRIS P1 TSL 1 (best) BASIC23.54■■□□□ 1.36
PLEKHD1A6NEE1 SART1-201ENST00000312397 3293 ntAPPRIS P1 TSL 1 (best) BASIC23.54■■□□□ 1.36
PLEKHD1A6NEE1 DACH1-203ENST00000619232 2986 ntAPPRIS ALT2 TSL 5 BASIC23.54■■□□□ 1.36
PLEKHD1A6NEE1 TCEAL4-209ENST00000472745 1571 ntAPPRIS P3 TSL 5 BASIC23.54■■□□□ 1.36
PLEKHD1A6NEE1 REL-202ENST00000394479 2398 ntAPPRIS ALT2 TSL 1 (best) BASIC23.54■■□□□ 1.36
PLEKHD1A6NEE1 GRB7-201ENST00000309156 2243 ntAPPRIS P1 TSL 1 (best) BASIC23.54■■□□□ 1.36
PLEKHD1A6NEE1 MRPL43-206ENST00000370236 866 ntAPPRIS P1 TSL 2 BASIC23.54■■□□□ 1.36
PLEKHD1A6NEE1 MRPL43-207ENST00000370241 824 ntTSL 5 BASIC23.54■■□□□ 1.36
PLEKHD1A6NEE1 AC073316.1-202ENST00000402115 988 ntTSL 5 BASIC23.54■■□□□ 1.36
PLEKHD1A6NEE1 LINC02046-201ENST00000469812 378 ntTSL 3 BASIC23.54■■□□□ 1.36
PLEKHD1A6NEE1 RAMP3-202ENST00000481345 559 ntAPPRIS P2 TSL 4 BASIC23.54■■□□□ 1.36
PLEKHD1A6NEE1 AC026434.2-201ENST00000506094 1078 ntBASIC23.54■■□□□ 1.36
PLEKHD1A6NEE1 IQSEC3P1-201ENST00000538799 536 ntBASIC23.54■■□□□ 1.36
PLEKHD1A6NEE1 AC100827.2-201ENST00000563214 1194 ntBASIC23.54■■□□□ 1.36
PLEKHD1A6NEE1 RN7SL555P-201ENST00000584742 339 ntBASIC23.54■■□□□ 1.36
PLEKHD1A6NEE1 AC011498.6-201ENST00000592034 510 ntTSL 5 BASIC23.54■■□□□ 1.36
PLEKHD1A6NEE1 BAZ1A-203ENST00000382422 5775 ntAPPRIS P1 TSL 1 (best) BASIC23.54■■□□□ 1.36
PLEKHD1A6NEE1 ARHGEF28-203ENST00000426542 6118 ntAPPRIS ALT2 TSL 1 (best) BASIC23.54■■□□□ 1.36
PLEKHD1A6NEE1 ARHGAP27-214ENST00000532891 2604 ntAPPRIS ALT2 TSL 5 BASIC23.54■■□□□ 1.36
PLEKHD1A6NEE1 CXorf40B-202ENST00000370404 1316 ntAPPRIS P2 TSL 2 BASIC23.54■■□□□ 1.36
PLEKHD1A6NEE1 SUZ12-201ENST00000322652 4491 ntAPPRIS P1 TSL 1 (best) BASIC23.54■■□□□ 1.36
PLEKHD1A6NEE1 PYGL-201ENST00000216392 3048 ntAPPRIS P1 TSL 1 (best) BASIC23.54■■□□□ 1.36
PLEKHD1A6NEE1 AC132872.2-201ENST00000581303 2368 ntTSL 5 BASIC23.54■■□□□ 1.36
PLEKHD1A6NEE1 HERPUD1-201ENST00000300302 1862 ntAPPRIS ALT1 TSL 1 (best) BASIC23.53■■□□□ 1.36
PLEKHD1A6NEE1 ELN-207ENST00000380562 2240 ntAPPRIS ALT2 TSL 1 (best) BASIC23.53■■□□□ 1.36
PLEKHD1A6NEE1 MPZL2-202ENST00000438295 1370 ntAPPRIS P1 TSL 1 (best) BASIC23.53■■□□□ 1.36
PLEKHD1A6NEE1 SH2D3C-213ENST00000629203 2478 ntTSL 2 BASIC23.53■■□□□ 1.36
PLEKHD1A6NEE1 STYXL1-201ENST00000248600 1415 ntAPPRIS P1 TSL 1 (best) BASIC23.53■■□□□ 1.36
PLEKHD1A6NEE1 AMMECR1-201ENST00000262844 5504 ntAPPRIS P3 TSL 1 (best) BASIC23.53■■□□□ 1.36
PLEKHD1A6NEE1 SLCO6A1-207ENST00000513675 1611 ntTSL 2 BASIC23.53■■□□□ 1.36
PLEKHD1A6NEE1 LYPLA2-202ENST00000374502 1072 ntTSL 2 BASIC23.53■■□□□ 1.36
PLEKHD1A6NEE1 IGHV3-13-201ENST00000390602 430 ntAPPRIS P1 BASIC23.53■■□□□ 1.36
PLEKHD1A6NEE1 RN7SKP175-201ENST00000408472 289 ntBASIC23.53■■□□□ 1.36
PLEKHD1A6NEE1 AL353637.1-201ENST00000451571 732 ntBASIC23.53■■□□□ 1.36
PLEKHD1A6NEE1 ORAOV1-211ENST00000542341 775 ntTSL 2 BASIC23.53■■□□□ 1.36
PLEKHD1A6NEE1 LINC01475-201ENST00000548010 766 ntTSL 1 (best) BASIC23.53■■□□□ 1.36
PLEKHD1A6NEE1 AL160314.3-201ENST00000556041 767 ntBASIC23.53■■□□□ 1.36
PLEKHD1A6NEE1 SNORD3B-2-202ENST00000571722 791 ntBASIC23.53■■□□□ 1.36
PLEKHD1A6NEE1 RANGRF-205ENST00000580434 749 ntTSL 1 (best) BASIC23.53■■□□□ 1.36
PLEKHD1A6NEE1 AP003419.4-201ENST00000616071 517 ntBASIC23.53■■□□□ 1.36
PLEKHD1A6NEE1 MAMSTR-201ENST00000318083 1837 ntAPPRIS P1 TSL 2 BASIC23.53■■□□□ 1.36
PLEKHD1A6NEE1 CSTB-204ENST00000640406 2354 ntTSL 2 BASIC23.53■■□□□ 1.36
PLEKHD1A6NEE1 REXO1L5P-201ENST00000622260 2098 ntBASIC23.53■■□□□ 1.36
PLEKHD1A6NEE1 GHRLOS-201ENST00000439539 1708 ntTSL 1 (best) BASIC23.53■■□□□ 1.36
PLEKHD1A6NEE1 B4GALT3-201ENST00000319769 1911 ntAPPRIS P1 TSL 1 (best) BASIC23.53■■□□□ 1.36
PLEKHD1A6NEE1 PLD3-201ENST00000356508 1906 ntAPPRIS P1 TSL 1 (best) BASIC23.53■■□□□ 1.36
PLEKHD1A6NEE1 ATRN-201ENST00000262919 8633 ntAPPRIS P4 TSL 5 BASIC23.53■■□□□ 1.36
PLEKHD1A6NEE1 LHFPL3-201ENST00000401970 1378 ntAPPRIS ALT1 TSL 1 (best) BASIC23.52■■□□□ 1.36
PLEKHD1A6NEE1 SLC12A8-207ENST00000469902 2989 ntAPPRIS P1 TSL 2 BASIC23.52■■□□□ 1.36
PLEKHD1A6NEE1 VASN-201ENST00000304735 2806 ntAPPRIS P1 TSL 1 (best) BASIC23.52■■□□□ 1.36
PLEKHD1A6NEE1 LINC01667-202ENST00000623919 1422 ntTSL 5 BASIC23.52■■□□□ 1.36
PLEKHD1A6NEE1 ELMO3-203ENST00000477898 2281 ntAPPRIS ALT2 TSL 2 BASIC23.52■■□□□ 1.36
PLEKHD1A6NEE1 CCDC136-212ENST00000487361 2268 ntAPPRIS ALT2 TSL 5 BASIC23.52■■□□□ 1.36
PLEKHD1A6NEE1 BTN1A1-202ENST00000613186 2266 ntTSL 2 BASIC23.52■■□□□ 1.36
PLEKHD1A6NEE1 NAT9-210ENST00000580301 1860 ntTSL 1 (best) BASIC23.52■■□□□ 1.36
PLEKHD1A6NEE1 SPDYE4-201ENST00000328794 923 ntAPPRIS P1 TSL 1 (best) BASIC23.52■■□□□ 1.36
PLEKHD1A6NEE1 FGF14-202ENST00000376143 744 ntAPPRIS P1 TSL 1 (best) BASIC23.52■■□□□ 1.36
PLEKHD1A6NEE1 DMAC2-203ENST00000417807 1065 ntTSL 2 BASIC23.52■■□□□ 1.36
PLEKHD1A6NEE1 PDIA3P2-201ENST00000428073 158 ntBASIC23.52■■□□□ 1.36
PLEKHD1A6NEE1 AL139246.4-201ENST00000442305 514 ntTSL 3 BASIC23.52■■□□□ 1.36
PLEKHD1A6NEE1 CEP164P1-201ENST00000455142 418 ntBASIC23.52■■□□□ 1.36
PLEKHD1A6NEE1 LY6E-208ENST00000520531 490 ntTSL 2 BASIC23.52■■□□□ 1.36
PLEKHD1A6NEE1 MCPH1-AS1-203ENST00000525186 869 ntTSL 3 BASIC23.52■■□□□ 1.36
PLEKHD1A6NEE1 CD63-214ENST00000552692 949 ntAPPRIS P1 TSL 1 (best) BASIC23.52■■□□□ 1.36
PLEKHD1A6NEE1 CISH-202ENST00000443053 2167 ntTSL 1 (best) BASIC23.52■■□□□ 1.36
PLEKHD1A6NEE1 EIF1B-AS1-201ENST00000625390 1958 ntTSL 1 (best) BASIC23.52■■□□□ 1.36
PLEKHD1A6NEE1 CSRNP1-201ENST00000273153 3148 ntAPPRIS P1 TSL 1 (best) BASIC23.52■■□□□ 1.36
PLEKHD1A6NEE1 DEPDC7-202ENST00000311388 2012 ntTSL 1 (best) BASIC23.52■■□□□ 1.36
PLEKHD1A6NEE1 GLUD2-201ENST00000328078 2493 ntAPPRIS P1 BASIC23.52■■□□□ 1.36
PLEKHD1A6NEE1 FADS2-202ENST00000278840 3630 ntAPPRIS P1 TSL 1 (best) BASIC23.52■■□□□ 1.36
PLEKHD1A6NEE1 C1orf198-201ENST00000366663 3858 ntAPPRIS P3 TSL 1 (best) BASIC23.52■■□□□ 1.36
PLEKHD1A6NEE1 MBD4-204ENST00000503197 2099 ntTSL 1 (best) BASIC23.52■■□□□ 1.35
PLEKHD1A6NEE1 WDR83-201ENST00000418543 1457 ntAPPRIS P1 TSL 1 (best) BASIC23.51■■□□□ 1.35
PLEKHD1A6NEE1 ZNF623-201ENST00000458270 2733 ntAPPRIS ALT2 TSL 1 (best) BASIC23.51■■□□□ 1.35
PLEKHD1A6NEE1 GUCY1A2-202ENST00000347596 2532 ntTSL 1 (best) BASIC23.51■■□□□ 1.35
PLEKHD1A6NEE1 N4BP2L1-210ENST00000613078 2032 ntTSL 5 BASIC23.51■■□□□ 1.35
PLEKHD1A6NEE1 TMEM9-204ENST00000367334 1529 ntAPPRIS P3 TSL 1 (best) BASIC23.51■■□□□ 1.35
PLEKHD1A6NEE1 NUDT1-201ENST00000339737 698 ntAPPRIS P1 TSL 1 (best) BASIC23.51■■□□□ 1.35
PLEKHD1A6NEE1 NUDT1-202ENST00000343985 771 ntTSL 1 (best) BASIC23.51■■□□□ 1.35
PLEKHD1A6NEE1 PNRC1-203ENST00000369472 816 ntTSL 2 BASIC23.51■■□□□ 1.35
Retrieved 100 of 98,524 protein–RNA pairs in 80.4 ms