Protein–RNA interactions for Protein: Q9Y3E1

HDGFL3, Hepatoma-derived growth factor-related protein 3, humanhuman

Predictions only

Length 203 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HDGFL3Q9Y3E1 XAGE1B-203ENST00000375616 614 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
HDGFL3Q9Y3E1 ADM2-201ENST00000395737 535 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
HDGFL3Q9Y3E1 SPTLC1P1-201ENST00000447199 261 ntBASIC14.02□□□□□ -0.17
HDGFL3Q9Y3E1 AC055876.2-201ENST00000531834 546 ntBASIC14.02□□□□□ -0.17
HDGFL3Q9Y3E1 AP006333.1-201ENST00000543817 575 ntTSL 4 BASIC14.02□□□□□ -0.17
HDGFL3Q9Y3E1 TRAPPC2L-206ENST00000564365 1060 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
HDGFL3Q9Y3E1 DUSP13-214ENST00000607131 1019 ntAPPRIS P3 TSL 1 (best) BASIC14.02□□□□□ -0.17
HDGFL3Q9Y3E1 AC099568.2-201ENST00000609194 695 ntBASIC14.02□□□□□ -0.17
HDGFL3Q9Y3E1 PRF1-203ENST00000638674 1080 ntTSL 5 BASIC14.02□□□□□ -0.17
HDGFL3Q9Y3E1 OR2T27-203ENST00000641652 1285 ntAPPRIS P1 BASIC14.02□□□□□ -0.17
HDGFL3Q9Y3E1 PRPF40B-201ENST00000261897 3602 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.17
HDGFL3Q9Y3E1 MAPKAP1-206ENST00000373511 3252 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
HDGFL3Q9Y3E1 SH3BP2-207ENST00000503393 9158 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
HDGFL3Q9Y3E1 TC2N-201ENST00000340892 4708 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
HDGFL3Q9Y3E1 ZNF114-204ENST00000595607 2478 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
HDGFL3Q9Y3E1 KCNH3-201ENST00000257981 3867 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
HDGFL3Q9Y3E1 MKNK2-201ENST00000250896 3774 ntAPPRIS P4 TSL 5 BASIC14.02□□□□□ -0.17
HDGFL3Q9Y3E1 COLGALT2-201ENST00000361927 5177 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
HDGFL3Q9Y3E1 MFF-204ENST00000353339 2186 ntTSL 5 BASIC14.02□□□□□ -0.17
HDGFL3Q9Y3E1 EIF4G1-216ENST00000427845 5038 ntTSL 5 BASIC14.02□□□□□ -0.17
HDGFL3Q9Y3E1 BCL11A-201ENST00000335712 5942 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
HDGFL3Q9Y3E1 TMA16-201ENST00000358572 1978 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
HDGFL3Q9Y3E1 MGAT4B-202ENST00000337755 3027 ntTSL 2 BASIC14.01□□□□□ -0.17
HDGFL3Q9Y3E1 AC009237.3-202ENST00000608013 3042 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
HDGFL3Q9Y3E1 LAPTM4A-201ENST00000175091 1765 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
HDGFL3Q9Y3E1 PRKD2-214ENST00000600194 2923 ntAPPRIS ALT2 TSL 2 BASIC14.01□□□□□ -0.17
HDGFL3Q9Y3E1 COX6B2-201ENST00000326529 1663 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
HDGFL3Q9Y3E1 PDZD4-202ENST00000393758 3763 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
HDGFL3Q9Y3E1 THOC5-203ENST00000397872 2676 ntAPPRIS P1 TSL 5 BASIC14.01□□□□□ -0.17
HDGFL3Q9Y3E1 CNN1-202ENST00000535659 1527 ntTSL 2 BASIC14.01□□□□□ -0.17
HDGFL3Q9Y3E1 FOXH1-201ENST00000377317 2503 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
HDGFL3Q9Y3E1 FBXL5-201ENST00000341285 3385 ntAPPRIS P3 TSL 1 (best) BASIC14.01□□□□□ -0.17
HDGFL3Q9Y3E1 SYBU-205ENST00000422135 3226 ntAPPRIS ALT2 TSL 5 BASIC14.01□□□□□ -0.17
HDGFL3Q9Y3E1 AL391825.1-201ENST00000457671 1364 ntBASIC14.01□□□□□ -0.17
HDGFL3Q9Y3E1 AC068580.4-201ENST00000636615 2228 ntAPPRIS ALT2 TSL 5 BASIC14.01□□□□□ -0.17
HDGFL3Q9Y3E1 SAMD4A-208ENST00000555192 1337 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
HDGFL3Q9Y3E1 TSPY26P-202ENST00000565928 3884 ntBASIC14.01□□□□□ -0.17
HDGFL3Q9Y3E1 RPS5-201ENST00000196551 740 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
HDGFL3Q9Y3E1 COX6A1-201ENST00000229379 572 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
HDGFL3Q9Y3E1 UBB-201ENST00000302182 1225 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
HDGFL3Q9Y3E1 ENDOV-201ENST00000323854 1226 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
HDGFL3Q9Y3E1 NTMT1-201ENST00000372480 852 ntAPPRIS P1 TSL 3 BASIC14.01□□□□□ -0.17
HDGFL3Q9Y3E1 MRPS6-201ENST00000399312 990 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
HDGFL3Q9Y3E1 AL022316.1-201ENST00000428765 572 ntTSL 4 BASIC14.01□□□□□ -0.17
HDGFL3Q9Y3E1 LINC01067-201ENST00000432575 664 ntTSL 3 BASIC14.01□□□□□ -0.17
HDGFL3Q9Y3E1 DFFBP1-201ENST00000433250 979 ntBASIC14.01□□□□□ -0.17
HDGFL3Q9Y3E1 TMPRSS11CP-201ENST00000453277 683 ntBASIC14.01□□□□□ -0.17
HDGFL3Q9Y3E1 CD81-207ENST00000481687 890 ntTSL 2 BASIC14.01□□□□□ -0.17
HDGFL3Q9Y3E1 AC019103.1-201ENST00000503095 272 ntTSL 3 BASIC14.01□□□□□ -0.17
HDGFL3Q9Y3E1 SERBP1P5-201ENST00000510079 1181 ntBASIC14.01□□□□□ -0.17
HDGFL3Q9Y3E1 SERF1B-208ENST00000515588 792 ntTSL 2 BASIC14.01□□□□□ -0.17
HDGFL3Q9Y3E1 AC233702.7-201ENST00000536958 924 ntTSL 5 BASIC14.01□□□□□ -0.17
HDGFL3Q9Y3E1 AC023310.3-201ENST00000557027 670 ntBASIC14.01□□□□□ -0.17
HDGFL3Q9Y3E1 AC100756.1-201ENST00000562736 682 ntBASIC14.01□□□□□ -0.17
HDGFL3Q9Y3E1 AC138749.3-201ENST00000567691 622 ntBASIC14.01□□□□□ -0.17
HDGFL3Q9Y3E1 SHBG-212ENST00000575314 1146 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
HDGFL3Q9Y3E1 LITAF-218ENST00000576036 603 ntAPPRIS P1 TSL 4 BASIC14.01□□□□□ -0.17
HDGFL3Q9Y3E1 AC079336.2-201ENST00000578408 927 ntTSL 3 BASIC14.01□□□□□ -0.17
HDGFL3Q9Y3E1 AC004233.3-201ENST00000607794 1269 ntBASIC14.01□□□□□ -0.17
HDGFL3Q9Y3E1 AC116165.1-201ENST00000611806 668 ntBASIC14.01□□□□□ -0.17
HDGFL3Q9Y3E1 RPP40-207ENST00000618533 1056 ntTSL 5 BASIC14.01□□□□□ -0.17
HDGFL3Q9Y3E1 AL645728.2-202ENST00000641679 227 ntBASIC14.01□□□□□ -0.17
HDGFL3Q9Y3E1 KCNC2-209ENST00000550433 2931 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
HDGFL3Q9Y3E1 CACNA2D3-201ENST00000288197 3671 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
HDGFL3Q9Y3E1 CACNA2D3-206ENST00000474759 3675 ntAPPRIS P2 TSL 1 (best) BASIC14.01□□□□□ -0.17
HDGFL3Q9Y3E1 API5-202ENST00000420461 2009 ntTSL 2 BASIC14.01□□□□□ -0.17
HDGFL3Q9Y3E1 NFE2L1-214ENST00000582155 1998 ntTSL 2 BASIC14.01□□□□□ -0.17
HDGFL3Q9Y3E1 EIF1B-AS1-201ENST00000625390 1958 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
HDGFL3Q9Y3E1 MGME1-202ENST00000377709 1936 ntTSL 2 BASIC14.01□□□□□ -0.17
HDGFL3Q9Y3E1 GAS2L2-201ENST00000604063 2661 ntAPPRIS ALT2 TSL 5 BASIC14.01□□□□□ -0.17
HDGFL3Q9Y3E1 SLC2A4-202ENST00000424875 1852 ntTSL 2 BASIC14.01□□□□□ -0.17
HDGFL3Q9Y3E1 ARVCF-201ENST00000263207 4041 ntAPPRIS P2 TSL 1 (best) BASIC14.01□□□□□ -0.17
HDGFL3Q9Y3E1 TFB2M-201ENST00000366514 1848 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
HDGFL3Q9Y3E1 CPA5-202ENST00000431780 1803 ntTSL 2 BASIC14.01□□□□□ -0.17
HDGFL3Q9Y3E1 AC022613.1-201ENST00000536835 2530 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
HDGFL3Q9Y3E1 SLC47A1-203ENST00000436810 1719 ntTSL 2 BASIC14.01□□□□□ -0.17
HDGFL3Q9Y3E1 RBPMS2-202ENST00000560606 1746 ntTSL 2 BASIC14.01□□□□□ -0.17
HDGFL3Q9Y3E1 LRP8-202ENST00000347547 2382 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
HDGFL3Q9Y3E1 TP73-209ENST00000603362 1668 ntTSL 5 BASIC14.01□□□□□ -0.17
HDGFL3Q9Y3E1 TDRD6-201ENST00000316081 6817 ntAPPRIS P3 TSL 1 (best) BASIC14.01□□□□□ -0.17
HDGFL3Q9Y3E1 TRMT2A-202ENST00000403707 2928 ntAPPRIS P3 TSL 1 (best) BASIC14.01□□□□□ -0.17
HDGFL3Q9Y3E1 AMT-224ENST00000635808 1610 ntTSL 5 BASIC14.01□□□□□ -0.17
HDGFL3Q9Y3E1 CAPZB-204ENST00000375144 1568 ntTSL 1 (best) BASIC14□□□□□ -0.17
HDGFL3Q9Y3E1 CAMTA1-201ENST00000303635 8444 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
HDGFL3Q9Y3E1 SEMA4F-201ENST00000339773 2177 ntTSL 1 (best) BASIC14□□□□□ -0.17
HDGFL3Q9Y3E1 CHID1-201ENST00000323578 3374 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
HDGFL3Q9Y3E1 AC104640.1-201ENST00000562617 2109 ntBASIC14□□□□□ -0.17
HDGFL3Q9Y3E1 PLXNC1-201ENST00000258526 7346 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
HDGFL3Q9Y3E1 DNM1-208ENST00000486160 3181 ntAPPRIS ALT1 TSL 1 (best) BASIC14□□□□□ -0.17
HDGFL3Q9Y3E1 EPS8L2-201ENST00000318562 3148 ntAPPRIS P2 TSL 1 (best) BASIC14□□□□□ -0.17
HDGFL3Q9Y3E1 PITPNM1-202ENST00000436757 4216 ntAPPRIS ALT1 TSL 1 (best) BASIC14□□□□□ -0.17
HDGFL3Q9Y3E1 ULK4-203ENST00000420927 1904 ntTSL 1 (best) BASIC14□□□□□ -0.17
HDGFL3Q9Y3E1 FKBPL-201ENST00000375156 1345 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
HDGFL3Q9Y3E1 GHDC-207ENST00000587427 2396 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
HDGFL3Q9Y3E1 GATA4-201ENST00000335135 3414 ntAPPRIS P3 TSL 5 BASIC14□□□□□ -0.17
HDGFL3Q9Y3E1 TRMT10C-201ENST00000309922 1819 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
HDGFL3Q9Y3E1 ADAMTS13-201ENST00000355699 4442 ntAPPRIS ALT2 TSL 1 (best) BASIC14□□□□□ -0.17
HDGFL3Q9Y3E1 TRAPPC11-202ENST00000357207 4435 ntTSL 1 (best) BASIC14□□□□□ -0.17
HDGFL3Q9Y3E1 TSPAN5-201ENST00000305798 3365 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
HDGFL3Q9Y3E1 NPM2-201ENST00000289820 1100 ntAPPRIS P2 TSL 1 (best) BASIC14□□□□□ -0.17
Retrieved 100 of 98,524 protein–RNA pairs in 55 ms