Protein–RNA interactions for Protein: Q9Y2S0

POLR1D, DNA-directed RNA polymerases I and III subunit RPAC2, humanhuman

Predictions only

Length 133 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
POLR1DQ9Y2S0 IKZF1-204ENST00000349824 5757 ntTSL 5 BASIC14□□□□□ -0.17
POLR1DQ9Y2S0 CD244-202ENST00000368033 1360 ntAPPRIS ALT2 TSL 1 (best) BASIC14□□□□□ -0.17
POLR1DQ9Y2S0 TET2-207ENST00000513237 10166 ntAPPRIS ALT2 TSL 1 (best) BASIC14□□□□□ -0.17
POLR1DQ9Y2S0 TET2-209ENST00000540549 10166 ntAPPRIS P2 TSL 1 (best) BASIC14□□□□□ -0.17
POLR1DQ9Y2S0 KCNC2-207ENST00000548513 3026 ntAPPRIS ALT2 TSL 1 (best) BASIC14□□□□□ -0.17
POLR1DQ9Y2S0 SLC1A7-204ENST00000611397 2499 ntTSL 1 (best) BASIC14□□□□□ -0.17
POLR1DQ9Y2S0 HIPK3-202ENST00000379016 7345 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
POLR1DQ9Y2S0 ATP6AP2-226ENST00000637526 1862 ntAPPRIS ALT2 TSL 5 BASIC14□□□□□ -0.17
POLR1DQ9Y2S0 ALOX15B-204ENST00000572022 2396 ntTSL 2 BASIC14□□□□□ -0.17
POLR1DQ9Y2S0 NFATC4-213ENST00000554591 2893 ntAPPRIS ALT2 TSL 1 (best) BASIC14□□□□□ -0.17
POLR1DQ9Y2S0 LCN2-203ENST00000373017 848 ntAPPRIS P2 TSL 5 BASIC14□□□□□ -0.17
POLR1DQ9Y2S0 PRUNE2-202ENST00000376713 1069 ntTSL 5 BASIC14□□□□□ -0.17
POLR1DQ9Y2S0 CACNB2-206ENST00000377328 1233 ntTSL 1 (best) BASIC14□□□□□ -0.17
POLR1DQ9Y2S0 CD81-202ENST00000381036 880 ntTSL 3 BASIC14□□□□□ -0.17
POLR1DQ9Y2S0 RAC2-202ENST00000401529 569 ntTSL 4 BASIC14□□□□□ -0.17
POLR1DQ9Y2S0 RPSAP43-201ENST00000402237 625 ntBASIC14□□□□□ -0.17
POLR1DQ9Y2S0 HHATL-AS1-201ENST00000423165 557 ntTSL 4 BASIC14□□□□□ -0.17
POLR1DQ9Y2S0 RPP21-221ENST00000428040 594 ntTSL 2 BASIC14□□□□□ -0.17
POLR1DQ9Y2S0 FAM58DP-201ENST00000428076 619 ntBASIC14□□□□□ -0.17
POLR1DQ9Y2S0 AC022201.2-201ENST00000445084 287 ntTSL 5 BASIC14□□□□□ -0.17
POLR1DQ9Y2S0 AC112482.1-201ENST00000492080 688 ntBASIC14□□□□□ -0.17
POLR1DQ9Y2S0 COX14-202ENST00000548985 677 ntAPPRIS P1 TSL 2 BASIC14□□□□□ -0.17
POLR1DQ9Y2S0 SLC25A3P1-206ENST00000569142 925 ntTSL 1 (best) BASIC14□□□□□ -0.17
POLR1DQ9Y2S0 TRAPPC6A-202ENST00000585934 758 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
POLR1DQ9Y2S0 KLK3-204ENST00000593997 1035 ntTSL 1 (best) BASIC14□□□□□ -0.17
POLR1DQ9Y2S0 ALKBH7-203ENST00000599849 556 ntTSL 3 BASIC14□□□□□ -0.17
POLR1DQ9Y2S0 NFIC-202ENST00000395111 1755 ntTSL 2 BASIC14□□□□□ -0.17
POLR1DQ9Y2S0 RNF167-211ENST00000575111 1757 ntAPPRIS P3 TSL 1 (best) BASIC14□□□□□ -0.17
POLR1DQ9Y2S0 NUP153-203ENST00000613258 5811 ntAPPRIS ALT2 TSL 1 (best) BASIC14□□□□□ -0.17
POLR1DQ9Y2S0 VPS26A-201ENST00000263559 2697 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
POLR1DQ9Y2S0 FAM215B-201ENST00000458392 2183 ntTSL 1 (best) BASIC14□□□□□ -0.17
POLR1DQ9Y2S0 MARCH2-208ENST00000602117 1667 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
POLR1DQ9Y2S0 CDH6-205ENST00000514738 2569 ntTSL 1 (best) BASIC14□□□□□ -0.17
POLR1DQ9Y2S0 CENPO-202ENST00000380834 4386 ntAPPRIS P1 TSL 5 BASIC14□□□□□ -0.17
POLR1DQ9Y2S0 PCYOX1L-201ENST00000274569 2546 ntAPPRIS P1 TSL 2 BASIC14□□□□□ -0.17
POLR1DQ9Y2S0 SCAP-215ENST00000545718 2950 ntTSL 5 BASIC14□□□□□ -0.17
POLR1DQ9Y2S0 SLC35D1-201ENST00000235345 6162 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
POLR1DQ9Y2S0 GRID2IP-202ENST00000452113 3428 ntTSL 5 BASIC14□□□□□ -0.17
POLR1DQ9Y2S0 KIAA0391-202ENST00000321130 1589 ntTSL 3 BASIC14□□□□□ -0.17
POLR1DQ9Y2S0 ZNF219-202ENST00000421093 2908 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
POLR1DQ9Y2S0 ARHGAP23-221ENST00000620417 3663 ntAPPRIS ALT2 TSL 5 BASIC14□□□□□ -0.17
POLR1DQ9Y2S0 CHRFAM7A-203ENST00000401522 1913 ntTSL 1 (best) BASIC14□□□□□ -0.17
POLR1DQ9Y2S0 LPAR1-203ENST00000374431 3637 ntAPPRIS P2 TSL 1 (best) BASIC14□□□□□ -0.17
POLR1DQ9Y2S0 ADCYAP1R1-207ENST00000614107 6575 ntAPPRIS ALT2 TSL 5 BASIC13.99□□□□□ -0.17
POLR1DQ9Y2S0 PLVAP-201ENST00000252590 2305 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
POLR1DQ9Y2S0 DOK5-202ENST00000395939 1453 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
POLR1DQ9Y2S0 HACD3-206ENST00000565299 1465 ntTSL 5 BASIC13.99□□□□□ -0.17
POLR1DQ9Y2S0 LEF1-202ENST00000379951 3477 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
POLR1DQ9Y2S0 HEPN1-201ENST00000408930 1434 ntAPPRIS P1 BASIC13.99□□□□□ -0.17
POLR1DQ9Y2S0 MATN3-202ENST00000421259 1443 ntAPPRIS ALT2 TSL 1 (best) BASIC13.99□□□□□ -0.17
POLR1DQ9Y2S0 TEAD2-203ENST00000539846 1444 ntTSL 2 BASIC13.99□□□□□ -0.17
POLR1DQ9Y2S0 CES1-202ENST00000361503 1835 ntAPPRIS ALT1 TSL 1 (best) BASIC13.99□□□□□ -0.17
POLR1DQ9Y2S0 RXRA-202ENST00000481739 1846 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
POLR1DQ9Y2S0 AC013268.4-201ENST00000637413 2228 ntBASIC13.99□□□□□ -0.17
POLR1DQ9Y2S0 AC131212.3-201ENST00000624087 4219 ntBASIC13.99□□□□□ -0.17
POLR1DQ9Y2S0 DMBT1P1-203ENST00000636837 4628 ntBASIC13.99□□□□□ -0.17
POLR1DQ9Y2S0 TVP23C-210ENST00000584811 2989 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
POLR1DQ9Y2S0 IL18BP-204ENST00000393703 1788 ntAPPRIS P2 TSL 3 BASIC13.99□□□□□ -0.17
POLR1DQ9Y2S0 STRC-205ENST00000450892 5680 ntAPPRIS P2 TSL 5 BASIC13.99□□□□□ -0.17
POLR1DQ9Y2S0 HSP90B1-201ENST00000299767 2858 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
POLR1DQ9Y2S0 SNAP47-AS1-201ENST00000413347 1708 ntTSL 2 BASIC13.99□□□□□ -0.17
POLR1DQ9Y2S0 ADGRG2-207ENST00000379869 4768 ntAPPRIS ALT2 TSL 1 (best) BASIC13.99□□□□□ -0.17
POLR1DQ9Y2S0 CYB5R1-201ENST00000367249 1651 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
POLR1DQ9Y2S0 EDEM3-201ENST00000318130 6898 ntAPPRIS P2 TSL 1 (best) BASIC13.99□□□□□ -0.17
POLR1DQ9Y2S0 PAGE5-201ENST00000289619 741 ntAPPRIS P3 TSL 1 (best) BASIC13.99□□□□□ -0.17
POLR1DQ9Y2S0 RPP21-224ENST00000442966 525 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
POLR1DQ9Y2S0 AC122138.1-201ENST00000508799 646 ntTSL 2 BASIC13.99□□□□□ -0.17
POLR1DQ9Y2S0 GATD1-206ENST00000526325 756 ntTSL 5 BASIC13.99□□□□□ -0.17
POLR1DQ9Y2S0 RAB1B-202ENST00000527397 991 ntTSL 3 BASIC13.99□□□□□ -0.17
POLR1DQ9Y2S0 SNHG9-202ENST00000564014 471 ntBASIC13.99□□□□□ -0.17
POLR1DQ9Y2S0 COX5A-203ENST00000564811 568 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
POLR1DQ9Y2S0 AC087392.4-201ENST00000574560 486 ntTSL 3 BASIC13.99□□□□□ -0.17
POLR1DQ9Y2S0 MRPL34-202ENST00000594999 555 ntAPPRIS P2 TSL 2 BASIC13.99□□□□□ -0.17
POLR1DQ9Y2S0 AC009093.7-201ENST00000623853 1223 ntBASIC13.99□□□□□ -0.17
POLR1DQ9Y2S0 ZBED1-203ENST00000381223 4510 ntAPPRIS P1 TSL 2 BASIC13.99□□□□□ -0.17
POLR1DQ9Y2S0 PGR-210ENST00000619228 3038 ntTSL 5 BASIC13.99□□□□□ -0.17
POLR1DQ9Y2S0 PAX3-206ENST00000392070 2258 ntAPPRIS P4 TSL 1 (best) BASIC13.99□□□□□ -0.17
POLR1DQ9Y2S0 ASAH1-249ENST00000637528 2215 ntTSL 5 BASIC13.99□□□□□ -0.17
POLR1DQ9Y2S0 LINC01978-202ENST00000574526 1540 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
POLR1DQ9Y2S0 CDR2L-201ENST00000337231 3536 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
POLR1DQ9Y2S0 PRR12-203ENST00000615927 4479 ntAPPRIS ALT2 TSL 5 BASIC13.99□□□□□ -0.17
POLR1DQ9Y2S0 VWA5B2-202ENST00000426955 4120 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
POLR1DQ9Y2S0 YY1AP1-210ENST00000368339 3073 ntAPPRIS ALT2 TSL 2 BASIC13.99□□□□□ -0.17
POLR1DQ9Y2S0 AP1M2-207ENST00000590923 1757 ntAPPRIS ALT1 TSL 1 (best) BASIC13.99□□□□□ -0.17
POLR1DQ9Y2S0 ASAH1-240ENST00000636997 1774 ntTSL 5 BASIC13.99□□□□□ -0.17
POLR1DQ9Y2S0 KCNT1-208ENST00000488444 3696 ntAPPRIS ALT2 TSL 5 BASIC13.99□□□□□ -0.17
POLR1DQ9Y2S0 AC105250.1-201ENST00000509378 2057 ntBASIC13.99□□□□□ -0.17
POLR1DQ9Y2S0 MYLK-201ENST00000346322 5892 ntAPPRIS ALT2 TSL 5 BASIC13.98□□□□□ -0.17
POLR1DQ9Y2S0 DAGLB-204ENST00000436575 2385 ntTSL 2 BASIC13.98□□□□□ -0.17
POLR1DQ9Y2S0 BEGAIN-201ENST00000355173 2674 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
POLR1DQ9Y2S0 FBXO44-204ENST00000376762 1734 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
POLR1DQ9Y2S0 GSN-206ENST00000394353 2311 ntTSL 2 BASIC13.98□□□□□ -0.17
POLR1DQ9Y2S0 FOLH1-201ENST00000256999 2635 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
POLR1DQ9Y2S0 ADAMTS7P1-201ENST00000613213 4793 ntBASIC13.98□□□□□ -0.17
POLR1DQ9Y2S0 DUSP6-202ENST00000308385 1959 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
POLR1DQ9Y2S0 PCBP4-201ENST00000322099 1964 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
POLR1DQ9Y2S0 CERNA1-202ENST00000560518 1972 ntTSL 2 BASIC13.98□□□□□ -0.17
POLR1DQ9Y2S0 AC090616.6-203ENST00000579186 1945 ntBASIC13.98□□□□□ -0.17
POLR1DQ9Y2S0 RNF150-201ENST00000306799 4535 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
POLR1DQ9Y2S0 GRIK4-202ENST00000438375 4214 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Retrieved 100 of 98,524 protein–RNA pairs in 37.5 ms