Protein–RNA interactions for Protein: Q9UPN3

MACF1, Microtubule-actin cross-linking factor 1, isoforms 1/2/3/5, humanhuman

Known RBP Predictions only

Length 7,388 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MACF1Q9UPN3 SOX21-201ENST00000376945 2778 ntAPPRIS P1 BASIC6.14□□□□□ -1.43
MACF1Q9UPN3 SNAP47-AS1-201ENST00000413347 1708 ntTSL 2 BASIC6.14□□□□□ -1.43
MACF1Q9UPN3 ZFP36-203ENST00000597629 1786 ntAPPRIS P2 TSL 1 (best) BASIC6.14□□□□□ -1.43
MACF1Q9UPN3 MIR3188-201ENST00000583494 85 ntBASIC6.14□□□□□ -1.43
MACF1Q9UPN3 SMIM22-207ENST00000589721 822 ntAPPRIS ALT2 TSL 1 (best) BASIC6.14□□□□□ -1.43
MACF1Q9UPN3 MKRN2-202ENST00000411987 1436 ntTSL 2 BASIC6.13□□□□□ -1.43
MACF1Q9UPN3 GOLM1-203ENST00000388712 3046 ntAPPRIS P2 TSL 1 (best) BASIC6.13□□□□□ -1.43
MACF1Q9UPN3 KIRREL1-202ENST00000360089 3304 ntTSL 1 (best) BASIC6.13□□□□□ -1.43
MACF1Q9UPN3 CLINT1-207ENST00000523908 2346 ntAPPRIS ALT1 TSL 1 (best) BASIC6.13□□□□□ -1.43
MACF1Q9UPN3 MBP-201ENST00000354542 575 ntTSL 2 BASIC6.13□□□□□ -1.43
MACF1Q9UPN3 RORA-AS1-201ENST00000501579 761 ntTSL 5 BASIC6.13□□□□□ -1.43
MACF1Q9UPN3 ADH5-213ENST00000626055 1299 ntTSL 5 BASIC6.13□□□□□ -1.43
MACF1Q9UPN3 HELLS-212ENST00000630929 400 ntTSL 5 BASIC6.13□□□□□ -1.43
MACF1Q9UPN3 RAX2-201ENST00000555633 2414 ntAPPRIS P1 TSL 1 (best) BASIC6.13□□□□□ -1.43
MACF1Q9UPN3 BCAS3-204ENST00000585744 2203 ntAPPRIS ALT2 TSL 5 BASIC6.13□□□□□ -1.43
MACF1Q9UPN3 HSD17B6-201ENST00000322165 1512 ntAPPRIS P1 TSL 1 (best) BASIC6.13□□□□□ -1.43
MACF1Q9UPN3 CTCFL-215ENST00000608158 1984 ntTSL 1 (best) BASIC6.13□□□□□ -1.43
MACF1Q9UPN3 SLC25A19-204ENST00000416858 1587 ntAPPRIS P1 TSL 1 (best) BASIC6.13□□□□□ -1.43
MACF1Q9UPN3 AMT-224ENST00000635808 1610 ntTSL 5 BASIC6.13□□□□□ -1.43
MACF1Q9UPN3 FAM239A-202ENST00000438107 2155 ntTSL 5 BASIC6.13□□□□□ -1.43
MACF1Q9UPN3 TMEM79-203ENST00000405535 2201 ntAPPRIS P1 TSL 1 (best) BASIC6.13□□□□□ -1.43
MACF1Q9UPN3 SAA1-202ENST00000405158 675 ntAPPRIS P1 TSL 5 BASIC6.13□□□□□ -1.43
MACF1Q9UPN3 MRPL19-203ENST00000409374 1076 ntAPPRIS P1 TSL 5 BASIC6.13□□□□□ -1.43
MACF1Q9UPN3 ZNF268-208ENST00000539248 759 ntTSL 1 (best) BASIC6.13□□□□□ -1.43
MACF1Q9UPN3 ZNF268-212ENST00000542711 861 ntTSL 1 (best) BASIC6.13□□□□□ -1.43
MACF1Q9UPN3 NMRK2-202ENST00000593949 869 ntAPPRIS ALT2 TSL 1 (best) BASIC6.13□□□□□ -1.43
MACF1Q9UPN3 AC002985.1-201ENST00000596918 685 ntAPPRIS P1 TSL 5 BASIC6.13□□□□□ -1.43
MACF1Q9UPN3 NMRK2-204ENST00000599576 691 ntTSL 3 BASIC6.13□□□□□ -1.43
MACF1Q9UPN3 MIAT_exon5_3.1-201ENST00000613656 377 ntBASIC6.13□□□□□ -1.43
MACF1Q9UPN3 APOBEC3H-207ENST00000613996 465 ntTSL 1 (best) BASIC6.13□□□□□ -1.43
MACF1Q9UPN3 CERKL-205ENST00000409440 2425 ntTSL 2 BASIC6.13□□□□□ -1.43
MACF1Q9UPN3 BPIFB6-201ENST00000349552 1362 ntAPPRIS P1 TSL 1 (best) BASIC6.13□□□□□ -1.43
MACF1Q9UPN3 EML3-217ENST00000531557 2509 ntTSL 5 BASIC6.13□□□□□ -1.43
MACF1Q9UPN3 ZNF57-201ENST00000306908 2003 ntAPPRIS P2 TSL 1 (best) BASIC6.13□□□□□ -1.43
MACF1Q9UPN3 ZNF57-205ENST00000614108 2002 ntAPPRIS ALT2 TSL 5 BASIC6.13□□□□□ -1.43
MACF1Q9UPN3 EVI5L-201ENST00000270530 3855 ntTSL 1 (best) BASIC6.13□□□□□ -1.43
MACF1Q9UPN3 GPSM2-201ENST00000264126 3032 ntAPPRIS P1 TSL 1 (best) BASIC6.13□□□□□ -1.43
MACF1Q9UPN3 PMPCB-202ENST00000428154 1714 ntTSL 1 (best) BASIC6.13□□□□□ -1.43
MACF1Q9UPN3 KRT5-201ENST00000252242 2531 ntAPPRIS P1 TSL 1 (best) BASIC6.13□□□□□ -1.43
MACF1Q9UPN3 DYNC1LI1-204ENST00000432458 1827 ntTSL 2 BASIC6.13□□□□□ -1.43
MACF1Q9UPN3 SPATA3-204ENST00000433428 856 ntAPPRIS P2 TSL 1 (best) BASIC6.13□□□□□ -1.43
MACF1Q9UPN3 TTTY18-201ENST00000438677 221 ntTSL 1 (best) BASIC6.13□□□□□ -1.43
MACF1Q9UPN3 AC012513.2-201ENST00000441511 1137 ntBASIC6.13□□□□□ -1.43
MACF1Q9UPN3 AC011383.1-201ENST00000517474 617 ntTSL 3 BASIC6.13□□□□□ -1.43
MACF1Q9UPN3 AP003351.1-201ENST00000522743 668 ntTSL 3 BASIC6.13□□□□□ -1.43
MACF1Q9UPN3 AC004923.1-201ENST00000527543 776 ntTSL 5 BASIC6.13□□□□□ -1.43
MACF1Q9UPN3 AC008982.1-201ENST00000594769 963 ntAPPRIS P1 TSL 5 BASIC6.13□□□□□ -1.43
MACF1Q9UPN3 AC010422.5-201ENST00000597961 585 ntAPPRIS P1 TSL 4 BASIC6.13□□□□□ -1.43
MACF1Q9UPN3 COL13A1-201ENST00000354547 3027 ntAPPRIS ALT2 TSL 5 BASIC6.13□□□□□ -1.43
MACF1Q9UPN3 RIBC1-202ENST00000375327 1420 ntAPPRIS P1 TSL 1 (best) BASIC6.13□□□□□ -1.43
MACF1Q9UPN3 CEP78-202ENST00000376597 2618 ntAPPRIS P4 TSL 1 (best) BASIC6.13□□□□□ -1.43
MACF1Q9UPN3 C8orf58-207ENST00000615223 1848 ntAPPRIS ALT2 TSL 5 BASIC6.13□□□□□ -1.43
MACF1Q9UPN3 ABLIM2-202ENST00000361581 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC6.13□□□□□ -1.43
MACF1Q9UPN3 LDHAL6CP-201ENST00000502352 1142 ntBASIC6.13□□□□□ -1.43
MACF1Q9UPN3 AC104964.1-201ENST00000520494 489 ntTSL 2 BASIC6.13□□□□□ -1.43
MACF1Q9UPN3 EHF-208ENST00000530286 1280 ntAPPRIS P1 TSL 1 (best) BASIC6.13□□□□□ -1.43
MACF1Q9UPN3 AL157871.2-201ENST00000556212 552 ntTSL 3 BASIC6.13□□□□□ -1.43
MACF1Q9UPN3 AC004584.1-201ENST00000572187 549 ntTSL 3 BASIC6.13□□□□□ -1.43
MACF1Q9UPN3 AC147067.2-201ENST00000608161 289 ntBASIC6.13□□□□□ -1.43
MACF1Q9UPN3 GNG4-202ENST00000366598 1721 ntAPPRIS P1 TSL 1 (best) BASIC6.13□□□□□ -1.43
MACF1Q9UPN3 TFCP2-204ENST00000548115 1862 ntTSL 5 BASIC6.13□□□□□ -1.43
MACF1Q9UPN3 INAVA-202ENST00000413687 2197 ntAPPRIS P2 TSL 2 BASIC6.13□□□□□ -1.43
MACF1Q9UPN3 ATOH1-201ENST00000306011 2212 ntAPPRIS P1 BASIC6.13□□□□□ -1.43
MACF1Q9UPN3 COCH-201ENST00000216361 2397 ntAPPRIS P1 TSL 1 (best) BASIC6.13□□□□□ -1.43
MACF1Q9UPN3 MAFF-206ENST00000538320 2458 ntAPPRIS P1 TSL 4 BASIC6.13□□□□□ -1.43
MACF1Q9UPN3 KLHL2-201ENST00000226725 3134 ntAPPRIS P3 TSL 1 (best) BASIC6.13□□□□□ -1.43
MACF1Q9UPN3 FOXD4L4-201ENST00000377413 2230 ntAPPRIS P1 BASIC6.13□□□□□ -1.43
MACF1Q9UPN3 GCGR-201ENST00000400723 2051 ntAPPRIS P2 TSL 1 (best) BASIC6.13□□□□□ -1.43
MACF1Q9UPN3 DNAAF4-201ENST00000321149 1993 ntAPPRIS P1 TSL 1 (best) BASIC6.13□□□□□ -1.43
MACF1Q9UPN3 DMKN-201ENST00000339686 1927 ntAPPRIS P3 TSL 1 (best) BASIC6.13□□□□□ -1.43
MACF1Q9UPN3 NMNAT3-201ENST00000296202 1569 ntAPPRIS P1 TSL 5 BASIC6.13□□□□□ -1.43
MACF1Q9UPN3 LINC00205-201ENST00000433465 1391 ntTSL 3 BASIC6.13□□□□□ -1.43
MACF1Q9UPN3 TISP43-202ENST00000409982 1039 ntAPPRIS P5 TSL 1 (best) BASIC6.13□□□□□ -1.43
MACF1Q9UPN3 ACYP2-204ENST00000422521 1115 ntTSL 5 BASIC6.13□□□□□ -1.43
MACF1Q9UPN3 TRBC2-201ENST00000466254 758 ntAPPRIS P1 BASIC6.13□□□□□ -1.43
MACF1Q9UPN3 TMEM101-204ENST00000587529 965 ntTSL 2 BASIC6.13□□□□□ -1.43
MACF1Q9UPN3 AC242426.4-201ENST00000606856 573 ntTSL 5 BASIC6.13□□□□□ -1.43
MACF1Q9UPN3 MYC-202ENST00000377970 2351 ntAPPRIS ALT2 TSL 1 (best) BASIC6.13□□□□□ -1.43
MACF1Q9UPN3 NOX5-209ENST00000530406 2289 ntAPPRIS P4 TSL 1 (best) BASIC6.13□□□□□ -1.43
MACF1Q9UPN3 PITX2-203ENST00000355080 2100 ntTSL 1 (best) BASIC6.13□□□□□ -1.43
MACF1Q9UPN3 SBSN-201ENST00000452271 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC6.13□□□□□ -1.43
MACF1Q9UPN3 CD14-201ENST00000302014 1886 ntAPPRIS P1 TSL 1 (best) BASIC6.13□□□□□ -1.43
MACF1Q9UPN3 FGFR4-203ENST00000393648 2733 ntAPPRIS ALT2 TSL 2 BASIC6.13□□□□□ -1.43
MACF1Q9UPN3 PUF60-209ENST00000527197 1559 ntTSL 5 BASIC6.13□□□□□ -1.43
MACF1Q9UPN3 MYL1-202ENST00000352451 1065 ntTSL 1 (best) BASIC6.13□□□□□ -1.43
MACF1Q9UPN3 AL133351.2-201ENST00000437718 484 ntTSL 2 BASIC6.13□□□□□ -1.43
MACF1Q9UPN3 BX322559.1-201ENST00000456613 319 ntTSL 3 BASIC6.13□□□□□ -1.43
MACF1Q9UPN3 RARS-210ENST00000626454 177 ntTSL 5 BASIC6.13□□□□□ -1.43
MACF1Q9UPN3 AC118553.2-202ENST00000638792 2729 ntAPPRIS ALT2 TSL 5 BASIC6.12□□□□□ -1.43
MACF1Q9UPN3 CAP2-208ENST00000611958 2686 ntTSL 2 BASIC6.12□□□□□ -1.43
MACF1Q9UPN3 MCRS1-203ENST00000546244 1686 ntTSL 1 (best) BASIC6.12□□□□□ -1.43
MACF1Q9UPN3 AC100861.1-202ENST00000500853 1970 ntTSL 2 BASIC6.12□□□□□ -1.43
MACF1Q9UPN3 CHRFAM7A-203ENST00000401522 1913 ntTSL 1 (best) BASIC6.12□□□□□ -1.43
MACF1Q9UPN3 LINC00574-201ENST00000420557 2318 ntTSL 2 BASIC6.12□□□□□ -1.43
MACF1Q9UPN3 RNVU1-8-201ENST00000364272 125 ntBASIC6.12□□□□□ -1.43
MACF1Q9UPN3 MAPK13-202ENST00000373759 1036 ntTSL 5 BASIC6.12□□□□□ -1.43
MACF1Q9UPN3 ZMYND10-AS1-201ENST00000440013 250 ntTSL 3 BASIC6.12□□□□□ -1.43
MACF1Q9UPN3 AC009041.4-201ENST00000620075 638 ntBASIC6.12□□□□□ -1.43
MACF1Q9UPN3 KRT33A-201ENST00000007735 1287 ntAPPRIS P1 TSL 1 (best) BASIC6.12□□□□□ -1.43
MACF1Q9UPN3 AC104581.1-202ENST00000635932 2618 ntBASIC6.12□□□□□ -1.43
Retrieved 100 of 98,524 protein–RNA pairs in 45.8 ms