Protein–RNA interactions for Protein: Q9UPM6

LHX6, LIM/homeobox protein Lhx6, humanhuman

Predictions only

Length 363 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LHX6Q9UPM6 AHR-201ENST00000242057 6276 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
LHX6Q9UPM6 AC092053.1-201ENST00000605787 1936 ntBASIC14.92□□□□□ -0.02
LHX6Q9UPM6 ST7L-207ENST00000369669 1743 ntTSL 2 BASIC14.92□□□□□ -0.02
LHX6Q9UPM6 APH1A-204ENST00000414276 1718 ntTSL 2 BASIC14.92□□□□□ -0.02
LHX6Q9UPM6 MBD1-207ENST00000398488 1512 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
LHX6Q9UPM6 KRT8P39-201ENST00000396270 1433 ntBASIC14.92□□□□□ -0.02
LHX6Q9UPM6 PTOV1-219ENST00000601638 1413 ntTSL 5 BASIC14.92□□□□□ -0.02
LHX6Q9UPM6 CASP6-202ENST00000352981 1347 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
LHX6Q9UPM6 COMT-205ENST00000406520 1339 ntAPPRIS P3 TSL 1 (best) BASIC14.92□□□□□ -0.02
LHX6Q9UPM6 CHST10-203ENST00000409701 1338 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
LHX6Q9UPM6 AHCYP2-201ENST00000430630 1300 ntBASIC14.92□□□□□ -0.02
LHX6Q9UPM6 AC026954.2-202ENST00000575474 2571 ntAPPRIS P5 TSL 5 BASIC14.91□□□□□ -0.02
LHX6Q9UPM6 ALOX12-201ENST00000251535 2358 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
LHX6Q9UPM6 PRDM5-212ENST00000515109 2259 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
LHX6Q9UPM6 KRT8-201ENST00000293308 1882 ntAPPRIS P1 TSL 5 BASIC14.91□□□□□ -0.02
LHX6Q9UPM6 SLC9A2-201ENST00000233969 5410 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
LHX6Q9UPM6 NAA30-204ENST00000556492 7644 ntAPPRIS P2 TSL 1 (best) BASIC14.91□□□□□ -0.02
LHX6Q9UPM6 LSP1-204ENST00000406638 2640 ntAPPRIS ALT2 TSL 2 BASIC14.91□□□□□ -0.02
LHX6Q9UPM6 TRIM11-202ENST00000366699 2511 ntTSL 2 BASIC14.91□□□□□ -0.02
LHX6Q9UPM6 CD1E-212ENST00000368167 1458 ntAPPRIS P4 TSL 1 (best) BASIC14.91□□□□□ -0.02
LHX6Q9UPM6 UVSSA-208ENST00000511563 1494 ntAPPRIS ALT2 TSL 2 BASIC14.91□□□□□ -0.02
LHX6Q9UPM6 SNX17-210ENST00000537606 2400 ntTSL 2 BASIC14.91□□□□□ -0.02
LHX6Q9UPM6 ZBTB46-201ENST00000245663 5185 ntAPPRIS P1 TSL 5 BASIC14.91□□□□□ -0.02
LHX6Q9UPM6 RASAL2-AS1-202ENST00000421505 2329 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
LHX6Q9UPM6 PCDHGC3-205ENST00000617641 2346 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
LHX6Q9UPM6 ABR-203ENST00000536794 2213 ntTSL 2 BASIC14.91□□□□□ -0.02
LHX6Q9UPM6 HIST1H4J-201ENST00000355057 373 ntAPPRIS P1 BASIC14.91□□□□□ -0.02
LHX6Q9UPM6 IFNGR1-201ENST00000367739 2139 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
LHX6Q9UPM6 ZCCHC6-202ENST00000375947 611 ntTSL 5 BASIC14.91□□□□□ -0.02
LHX6Q9UPM6 PGGT1B-202ENST00000379615 903 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
LHX6Q9UPM6 RABL2A-203ENST00000393166 1052 ntAPPRIS P3 TSL 1 (best) BASIC14.91□□□□□ -0.02
LHX6Q9UPM6 MAPK15-203ENST00000395108 765 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
LHX6Q9UPM6 SERF2-206ENST00000409291 807 ntTSL 3 BASIC14.91□□□□□ -0.02
LHX6Q9UPM6 OR51A6P-201ENST00000418680 1004 ntBASIC14.91□□□□□ -0.02
LHX6Q9UPM6 C2orf27AP3-201ENST00000434123 579 ntBASIC14.91□□□□□ -0.02
LHX6Q9UPM6 AL353681.1-201ENST00000435828 731 ntTSL 3 BASIC14.91□□□□□ -0.02
LHX6Q9UPM6 AL096772.1-201ENST00000451135 781 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
LHX6Q9UPM6 TMEM212-IT1-201ENST00000456146 470 ntTSL 3 BASIC14.91□□□□□ -0.02
LHX6Q9UPM6 AC147067.1-201ENST00000466692 579 ntTSL 2 BASIC14.91□□□□□ -0.02
LHX6Q9UPM6 AC008406.2-201ENST00000507058 532 ntTSL 3 BASIC14.91□□□□□ -0.02
LHX6Q9UPM6 AC013565.3-201ENST00000565547 450 ntTSL 3 BASIC14.91□□□□□ -0.02
LHX6Q9UPM6 AC138207.8-201ENST00000579692 739 ntTSL 3 BASIC14.91□□□□□ -0.02
LHX6Q9UPM6 AC137723.1-201ENST00000584705 709 ntTSL 3 BASIC14.91□□□□□ -0.02
LHX6Q9UPM6 RAB11B-202ENST00000594216 894 ntTSL 2 BASIC14.91□□□□□ -0.02
LHX6Q9UPM6 CR589904.1-202ENST00000611154 660 ntTSL 5 BASIC14.91□□□□□ -0.02
LHX6Q9UPM6 AL354718.3-201ENST00000616414 581 ntBASIC14.91□□□□□ -0.02
LHX6Q9UPM6 CR382287.1-201ENST00000623954 586 ntBASIC14.91□□□□□ -0.02
LHX6Q9UPM6 DENND3-201ENST00000262585 5438 ntAPPRIS P2 TSL 5 BASIC14.91□□□□□ -0.02
LHX6Q9UPM6 LIFR-202ENST00000453190 4253 ntAPPRIS P1 TSL 2 BASIC14.91□□□□□ -0.02
LHX6Q9UPM6 FUT5-201ENST00000252675 1916 ntAPPRIS P1 BASIC14.91□□□□□ -0.02
LHX6Q9UPM6 RHBDF1P1-201ENST00000427504 1941 ntBASIC14.91□□□□□ -0.02
LHX6Q9UPM6 SYNRG-222ENST00000614941 3406 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
LHX6Q9UPM6 ZMYM3-203ENST00000373981 1841 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
LHX6Q9UPM6 FAM49B-202ENST00000517654 1817 ntAPPRIS P1 TSL 5 BASIC14.91□□□□□ -0.02
LHX6Q9UPM6 OGDH-204ENST00000443864 1744 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
LHX6Q9UPM6 GGT6-203ENST00000573591 1730 ntTSL 4 BASIC14.91□□□□□ -0.02
LHX6Q9UPM6 EIF3L-202ENST00000406934 2282 ntTSL 2 BASIC14.91□□□□□ -0.02
LHX6Q9UPM6 ARL4C-202ENST00000390645 4013 ntAPPRIS P1 BASIC14.91□□□□□ -0.02
LHX6Q9UPM6 ABHD14B-206ENST00000483233 2056 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
LHX6Q9UPM6 MAN1C1-201ENST00000263979 2627 ntTSL 5 BASIC14.91□□□□□ -0.02
LHX6Q9UPM6 AL136379.1-201ENST00000623471 2642 ntBASIC14.91□□□□□ -0.02
LHX6Q9UPM6 NF2-202ENST00000338641 6025 ntAPPRIS P4 TSL 1 (best) BASIC14.91□□□□□ -0.02
LHX6Q9UPM6 AC134312.5-201ENST00000568031 1313 ntBASIC14.91□□□□□ -0.02
LHX6Q9UPM6 VOPP1-207ENST00000428648 2866 ntTSL 2 BASIC14.91□□□□□ -0.02
LHX6Q9UPM6 LINC01148-201ENST00000557527 1763 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
LHX6Q9UPM6 MAP3K8-207ENST00000542547 2782 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
LHX6Q9UPM6 U2AF2-201ENST00000308924 1698 ntAPPRIS P3 TSL 1 (best) BASIC14.9□□□□□ -0.02
LHX6Q9UPM6 RFC5-204ENST00000454402 1655 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
LHX6Q9UPM6 COPS3-212ENST00000539941 1699 ntTSL 2 BASIC14.9□□□□□ -0.02
LHX6Q9UPM6 TTLL10-201ENST00000379288 2114 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
LHX6Q9UPM6 BBS5-201ENST00000295240 3475 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
LHX6Q9UPM6 CENPN-202ENST00000305850 2481 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
LHX6Q9UPM6 IL12RB2-202ENST00000371000 2454 ntTSL 2 BASIC14.9□□□□□ -0.02
LHX6Q9UPM6 RTL6-201ENST00000341255 5495 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
LHX6Q9UPM6 GPR137-212ENST00000539851 1843 ntTSL 2 BASIC14.9□□□□□ -0.02
LHX6Q9UPM6 FGFR4-207ENST00000502906 2638 ntAPPRIS P4 TSL 1 (best) BASIC14.9□□□□□ -0.02
LHX6Q9UPM6 HAS3-205ENST00000569188 2170 ntAPPRIS P1 TSL 2 BASIC14.9□□□□□ -0.02
LHX6Q9UPM6 MAPT-201ENST00000262410 6762 ntAPPRIS P4 TSL 1 (best) BASIC14.9□□□□□ -0.02
LHX6Q9UPM6 NMNAT3-203ENST00000413939 1711 ntTSL 2 BASIC14.9□□□□□ -0.02
LHX6Q9UPM6 PGAP3-211ENST00000619169 2094 ntTSL 2 BASIC14.9□□□□□ -0.02
LHX6Q9UPM6 IER3-201ENST00000259874 1244 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
LHX6Q9UPM6 C8orf74-201ENST00000304519 1036 ntAPPRIS P2 TSL 1 (best) BASIC14.9□□□□□ -0.02
LHX6Q9UPM6 GIMAP7-201ENST00000313543 1256 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
LHX6Q9UPM6 CD1E-202ENST00000368155 696 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
LHX6Q9UPM6 CD1E-204ENST00000368157 399 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
LHX6Q9UPM6 KRTAP1-4-201ENST00000377747 408 ntAPPRIS P1 BASIC14.9□□□□□ -0.02
LHX6Q9UPM6 MIR769-201ENST00000390225 118 ntBASIC14.9□□□□□ -0.02
LHX6Q9UPM6 NUDT1-205ENST00000397048 783 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
LHX6Q9UPM6 KRTAP10-13P-201ENST00000412914 571 ntBASIC14.9□□□□□ -0.02
LHX6Q9UPM6 AL157902.1-202ENST00000425010 763 ntTSL 3 BASIC14.9□□□□□ -0.02
LHX6Q9UPM6 LIMS3-201ENST00000437679 1220 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
LHX6Q9UPM6 RNU6-775P-201ENST00000459318 96 ntBASIC14.9□□□□□ -0.02
LHX6Q9UPM6 CCDC153-204ENST00000503566 1295 ntAPPRIS P1 TSL 5 BASIC14.9□□□□□ -0.02
LHX6Q9UPM6 PRDM2-213ENST00000503842 705 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
LHX6Q9UPM6 AC006487.1-201ENST00000514506 1221 ntTSL 2 BASIC14.9□□□□□ -0.02
LHX6Q9UPM6 AC067930.5-201ENST00000531730 1173 ntTSL 2 BASIC14.9□□□□□ -0.02
LHX6Q9UPM6 AL021368.1-201ENST00000607490 540 ntBASIC14.9□□□□□ -0.02
LHX6Q9UPM6 SPATA21-206ENST00000612240 603 ntTSL 5 BASIC14.9□□□□□ -0.02
LHX6Q9UPM6 FP565260.4-201ENST00000624081 513 ntAPPRIS P1 TSL 5 BASIC14.9□□□□□ -0.02
LHX6Q9UPM6 DOCK7-203ENST00000404627 2678 ntTSL 2 BASIC14.9□□□□□ -0.02
Retrieved 100 of 98,524 protein–RNA pairs in 52.5 ms