Protein–RNA interactions for Protein: Q9UND3

NPIPA1, Nuclear pore complex-interacting protein family member A1, humanhuman

Predictions only

Length 350 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPA1Q9UND3 TYSND1-201ENST00000287078 3644 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
NPIPA1Q9UND3 CYP4F3-202ENST00000585846 2056 ntAPPRIS ALT1 TSL 1 (best) BASIC14.43□□□□□ -0.1
NPIPA1Q9UND3 RALGPS2-204ENST00000367635 5834 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
NPIPA1Q9UND3 GABRA5-202ENST00000355395 2183 ntAPPRIS P1 TSL 5 BASIC14.43□□□□□ -0.1
NPIPA1Q9UND3 SERTM1-201ENST00000315190 3207 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
NPIPA1Q9UND3 VSX2-201ENST00000261980 2995 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
NPIPA1Q9UND3 SALL4-203ENST00000395997 1918 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
NPIPA1Q9UND3 DUSP14-204ENST00000613659 1559 ntAPPRIS P1 TSL 2 BASIC14.43□□□□□ -0.1
NPIPA1Q9UND3 SLC2A13-202ENST00000380858 3082 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
NPIPA1Q9UND3 MEF2D-201ENST00000348159 5965 ntAPPRIS P3 TSL 1 (best) BASIC14.43□□□□□ -0.1
NPIPA1Q9UND3 TTYH2-206ENST00000529107 2015 ntTSL 2 BASIC14.42□□□□□ -0.1
NPIPA1Q9UND3 MAP7-207ENST00000616617 4326 ntAPPRIS ALT2 TSL 5 BASIC14.42□□□□□ -0.1
NPIPA1Q9UND3 PLPPR5-201ENST00000263177 3288 ntAPPRIS P4 TSL 1 (best) BASIC14.42□□□□□ -0.1
NPIPA1Q9UND3 CCDC50-201ENST00000392455 8429 ntAPPRIS ALT1 TSL 1 (best) BASIC14.42□□□□□ -0.1
NPIPA1Q9UND3 HHIP-202ENST00000434550 1770 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
NPIPA1Q9UND3 AEBP1-206ENST00000450684 2571 ntTSL 2 BASIC14.42□□□□□ -0.1
NPIPA1Q9UND3 RGR-202ENST00000359452 2247 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
NPIPA1Q9UND3 AP000253.1-201ENST00000449339 2233 ntTSL 3 BASIC14.42□□□□□ -0.1
NPIPA1Q9UND3 B4GALNT3-201ENST00000266383 5068 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
NPIPA1Q9UND3 KRT8P37-201ENST00000451609 1420 ntBASIC14.42□□□□□ -0.1
NPIPA1Q9UND3 TEAD2-203ENST00000539846 1444 ntTSL 2 BASIC14.42□□□□□ -0.1
NPIPA1Q9UND3 MAP4K1-208ENST00000589130 2654 ntTSL 5 BASIC14.42□□□□□ -0.1
NPIPA1Q9UND3 C19orf68-203ENST00000614654 3588 ntAPPRIS P2 TSL 5 BASIC14.42□□□□□ -0.1
NPIPA1Q9UND3 SUCO-210ENST00000616058 5495 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
NPIPA1Q9UND3 Z99756.1-201ENST00000458463 1951 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
NPIPA1Q9UND3 CLASP2-204ENST00000399362 7282 ntAPPRIS ALT2 TSL 5 BASIC14.42□□□□□ -0.1
NPIPA1Q9UND3 FGD4-212ENST00000534526 2977 ntTSL 5 BASIC14.42□□□□□ -0.1
NPIPA1Q9UND3 RTN4RL1-201ENST00000331238 3625 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
NPIPA1Q9UND3 ZNF831-201ENST00000371030 9401 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
NPIPA1Q9UND3 SUCLA2-201ENST00000378654 2192 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
NPIPA1Q9UND3 KTN1-AS1-202ENST00000412224 2185 ntTSL 2 BASIC14.42□□□□□ -0.1
NPIPA1Q9UND3 UBE2J1-201ENST00000435041 4290 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
NPIPA1Q9UND3 NKX3-1-201ENST00000380871 3271 ntAPPRIS P3 TSL 1 (best) BASIC14.42□□□□□ -0.1
NPIPA1Q9UND3 LRCOL1-201ENST00000376608 778 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
NPIPA1Q9UND3 AC114730.3-201ENST00000435195 584 ntTSL 5 BASIC14.42□□□□□ -0.1
NPIPA1Q9UND3 ZNF707-203ENST00000442058 562 ntTSL 4 BASIC14.42□□□□□ -0.1
NPIPA1Q9UND3 PDCD6-202ENST00000505221 672 ntTSL 3 BASIC14.42□□□□□ -0.1
NPIPA1Q9UND3 AP000721.1-201ENST00000535431 559 ntAPPRIS P1 TSL 5 BASIC14.42□□□□□ -0.1
NPIPA1Q9UND3 AC006064.3-201ENST00000537921 477 ntTSL 4 BASIC14.42□□□□□ -0.1
NPIPA1Q9UND3 AC008969.1-205ENST00000553254 876 ntTSL 2 BASIC14.42□□□□□ -0.1
NPIPA1Q9UND3 TMEM261P1-201ENST00000604899 340 ntBASIC14.42□□□□□ -0.1
NPIPA1Q9UND3 LINC01115-203ENST00000606068 577 ntBASIC14.42□□□□□ -0.1
NPIPA1Q9UND3 AL033527.5-201ENST00000641382 801 ntBASIC14.42□□□□□ -0.1
NPIPA1Q9UND3 PHYHD1-202ENST00000353176 1374 ntTSL 5 BASIC14.42□□□□□ -0.1
NPIPA1Q9UND3 ING4-202ENST00000396807 1393 ntAPPRIS ALT1 TSL 1 (best) BASIC14.42□□□□□ -0.1
NPIPA1Q9UND3 SEMA4C-201ENST00000305476 3545 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
NPIPA1Q9UND3 MASTL-203ENST00000375946 3623 ntAPPRIS P3 TSL 1 (best) BASIC14.42□□□□□ -0.1
NPIPA1Q9UND3 ROR2-202ENST00000375715 2993 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
NPIPA1Q9UND3 SIGLEC7-202ENST00000317643 1754 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
NPIPA1Q9UND3 APPL1-201ENST00000288266 6058 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
NPIPA1Q9UND3 TMPO-AS1-202ENST00000548760 3357 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
NPIPA1Q9UND3 PDGFB-201ENST00000331163 3497 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
NPIPA1Q9UND3 GDF2-201ENST00000581492 1955 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
NPIPA1Q9UND3 IGHA1-202ENST00000641837 1310 ntAPPRIS P5 BASIC14.41□□□□□ -0.1
NPIPA1Q9UND3 ATP2A2-204ENST00000539276 4094 ntAPPRIS P4 TSL 1 (best) BASIC14.41□□□□□ -0.1
NPIPA1Q9UND3 SCARB1-202ENST00000339570 3329 ntTSL 5 BASIC14.41□□□□□ -0.1
NPIPA1Q9UND3 EXT1-201ENST00000378204 8270 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
NPIPA1Q9UND3 CPSF1-213ENST00000620219 4462 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
NPIPA1Q9UND3 PTHLH-209ENST00000545234 1544 ntAPPRIS ALT1 TSL 5 BASIC14.41□□□□□ -0.1
NPIPA1Q9UND3 NUTM2F-201ENST00000253262 2561 ntAPPRIS P2 TSL 1 (best) BASIC14.41□□□□□ -0.1
NPIPA1Q9UND3 Z97205.2-201ENST00000564697 1639 ntBASIC14.41□□□□□ -0.1
NPIPA1Q9UND3 SEMA4F-210ENST00000611975 6007 ntTSL 5 BASIC14.41□□□□□ -0.1
NPIPA1Q9UND3 CACFD1-202ENST00000316948 2794 ntAPPRIS P3 TSL 1 (best) BASIC14.41□□□□□ -0.1
NPIPA1Q9UND3 ADSL-220ENST00000636714 1734 ntAPPRIS ALT1 TSL 5 BASIC14.41□□□□□ -0.1
NPIPA1Q9UND3 OR2I1P-209ENST00000641730 5365 ntBASIC14.41□□□□□ -0.1
NPIPA1Q9UND3 ARHGEF28-202ENST00000296799 4424 ntAPPRIS ALT2 TSL 2 BASIC14.41□□□□□ -0.1
NPIPA1Q9UND3 AC011477.6-201ENST00000604980 1927 ntBASIC14.41□□□□□ -0.1
NPIPA1Q9UND3 TSPAN5-201ENST00000305798 3365 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
NPIPA1Q9UND3 MAGEA2-208ENST00000623438 2009 ntAPPRIS P1 TSL 2 BASIC14.41□□□□□ -0.1
NPIPA1Q9UND3 CYP4F22-202ENST00000601005 2445 ntAPPRIS P1 TSL 5 BASIC14.41□□□□□ -0.1
NPIPA1Q9UND3 AXIN2-202ENST00000375702 2541 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
NPIPA1Q9UND3 ANXA11-203ENST00000422982 2534 ntAPPRIS P3 TSL 1 (best) BASIC14.41□□□□□ -0.1
NPIPA1Q9UND3 GLS2-217ENST00000623608 2518 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
NPIPA1Q9UND3 EIF4E-201ENST00000280892 1097 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
NPIPA1Q9UND3 AL161638.1-201ENST00000420354 481 ntTSL 3 BASIC14.41□□□□□ -0.1
NPIPA1Q9UND3 AL513217.1-202ENST00000458139 600 ntTSL 3 BASIC14.41□□□□□ -0.1
NPIPA1Q9UND3 DCUN1D5-209ENST00000531543 1030 ntTSL 5 BASIC14.41□□□□□ -0.1
NPIPA1Q9UND3 NDUFA4L2-206ENST00000556732 883 ntTSL 3 BASIC14.41□□□□□ -0.1
NPIPA1Q9UND3 LINC00237-203ENST00000593272 630 ntTSL 4 BASIC14.41□□□□□ -0.1
NPIPA1Q9UND3 AC008758.5-201ENST00000595562 617 ntAPPRIS P1 TSL 4 BASIC14.41□□□□□ -0.1
NPIPA1Q9UND3 AC010326.2-201ENST00000602124 1020 ntAPPRIS P1 TSL 3 BASIC14.41□□□□□ -0.1
NPIPA1Q9UND3 PRF1-203ENST00000638674 1080 ntTSL 5 BASIC14.41□□□□□ -0.1
NPIPA1Q9UND3 SCNN1A-221ENST00000543768 2361 ntAPPRIS ALT2 TSL 2 BASIC14.41□□□□□ -0.1
NPIPA1Q9UND3 ACAD9-201ENST00000308982 2454 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
NPIPA1Q9UND3 MYEF2-215ENST00000610570 2591 ntTSL 5 BASIC14.41□□□□□ -0.1
NPIPA1Q9UND3 BRF1-206ENST00000446501 2858 ntTSL 2 BASIC14.41□□□□□ -0.1
NPIPA1Q9UND3 AFG3L2-201ENST00000269143 3247 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
NPIPA1Q9UND3 INHBB-201ENST00000295228 3204 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
NPIPA1Q9UND3 ADAMTSL4-204ENST00000369041 2908 ntTSL 5 BASIC14.41□□□□□ -0.1
NPIPA1Q9UND3 KCNC2-209ENST00000550433 2931 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
NPIPA1Q9UND3 TLE2-203ENST00000443826 2238 ntTSL 2 BASIC14.41□□□□□ -0.1
NPIPA1Q9UND3 FAM181A-201ENST00000267594 1816 ntTSL 2 BASIC14.41□□□□□ -0.1
NPIPA1Q9UND3 OXA1L-203ENST00000412791 1440 ntTSL 5 BASIC14.41□□□□□ -0.1
NPIPA1Q9UND3 AC097376.2-205ENST00000610159 5334 ntBASIC14.4□□□□□ -0.1
NPIPA1Q9UND3 ARFGAP1-210ENST00000519273 3176 ntTSL 2 BASIC14.4□□□□□ -0.1
NPIPA1Q9UND3 GTF2IRD1-205ENST00000476977 5868 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
NPIPA1Q9UND3 RALGPS1-203ENST00000373434 2466 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
NPIPA1Q9UND3 PIK3R6-203ENST00000614407 2265 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
NPIPA1Q9UND3 AC134407.2-201ENST00000625089 1978 ntBASIC14.4□□□□□ -0.1
NPIPA1Q9UND3 EPN1-203ENST00000411543 2621 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Retrieved 100 of 98,524 protein–RNA pairs in 45.2 ms