Protein–RNA interactions for Protein: Q9UI42

CPA4, Carboxypeptidase A4, humanhuman

Predictions only

Length 421 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPA4Q9UI42 WAPL-202ENST00000298767 6333 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
CPA4Q9UI42 DFNA5-207ENST00000419307 2265 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
CPA4Q9UI42 ITGA7-201ENST00000257879 4120 ntAPPRIS P3 TSL 1 (best) BASIC17.55■□□□□ 0.4
CPA4Q9UI42 LSS-205ENST00000457828 4390 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
CPA4Q9UI42 NIPAL2-201ENST00000341166 4581 ntTSL 2 BASIC17.55■□□□□ 0.4
CPA4Q9UI42 FOXD4L1-201ENST00000306507 2491 ntAPPRIS P1 BASIC17.55■□□□□ 0.4
CPA4Q9UI42 KCNJ12-201ENST00000331718 2198 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
CPA4Q9UI42 ZFP91-201ENST00000316059 5220 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
CPA4Q9UI42 VHL-202ENST00000345392 2696 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
CPA4Q9UI42 TJP2-202ENST00000377245 4611 ntAPPRIS P4 TSL 1 (best) BASIC17.54■□□□□ 0.4
CPA4Q9UI42 DDX42-208ENST00000578681 4337 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
CPA4Q9UI42 SLC6A17-201ENST00000331565 6427 ntAPPRIS P1 TSL 2 BASIC17.54■□□□□ 0.4
CPA4Q9UI42 DNASE1L2-204ENST00000567494 1301 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
CPA4Q9UI42 ACTG1-208ENST00000575087 2001 ntAPPRIS P1 TSL 5 BASIC17.54■□□□□ 0.4
CPA4Q9UI42 KRCC1-201ENST00000347055 1753 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
CPA4Q9UI42 CD1E-202ENST00000368155 696 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
CPA4Q9UI42 CD1E-204ENST00000368157 399 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
CPA4Q9UI42 DPCD-202ENST00000370151 858 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
CPA4Q9UI42 NPPA-201ENST00000376476 728 ntTSL 3 BASIC17.54■□□□□ 0.4
CPA4Q9UI42 PARVG-202ENST00000415224 999 ntTSL 2 BASIC17.54■□□□□ 0.4
CPA4Q9UI42 Z82214.1-201ENST00000419643 988 ntTSL 3 BASIC17.54■□□□□ 0.4
CPA4Q9UI42 C9orf116-205ENST00000429260 678 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
CPA4Q9UI42 AC234782.1-201ENST00000451950 919 ntBASIC17.54■□□□□ 0.4
CPA4Q9UI42 CMTM3-215ENST00000568477 687 ntTSL 3 BASIC17.54■□□□□ 0.4
CPA4Q9UI42 AC023824.4-202ENST00000569557 849 ntTSL 3 BASIC17.54■□□□□ 0.4
CPA4Q9UI42 AC008750.3-201ENST00000601148 437 ntTSL 5 BASIC17.54■□□□□ 0.4
CPA4Q9UI42 AC004923.1-202ENST00000642106 209 ntBASIC17.54■□□□□ 0.4
CPA4Q9UI42 GAB1-201ENST00000262994 2648 ntAPPRIS ALT1 TSL 1 (best) BASIC17.54■□□□□ 0.4
CPA4Q9UI42 LENG8-202ENST00000376514 5146 ntAPPRIS ALT2 TSL 5 BASIC17.54■□□□□ 0.4
CPA4Q9UI42 FBXL5-202ENST00000412094 2837 ntAPPRIS ALT1 TSL 1 (best) BASIC17.54■□□□□ 0.4
CPA4Q9UI42 WIPF1-201ENST00000272746 3028 ntAPPRIS ALT2 TSL 1 (best) BASIC17.54■□□□□ 0.4
CPA4Q9UI42 BAIAP2-205ENST00000435091 2129 ntAPPRIS ALT2 TSL 1 (best) BASIC17.54■□□□□ 0.4
CPA4Q9UI42 MAPT-201ENST00000262410 6762 ntAPPRIS P4 TSL 1 (best) BASIC17.54■□□□□ 0.4
CPA4Q9UI42 IFFO1-211ENST00000615885 2775 ntTSL 5 BASIC17.54■□□□□ 0.4
CPA4Q9UI42 MAP6-202ENST00000434603 4329 ntAPPRIS ALT2 TSL 1 (best) BASIC17.54■□□□□ 0.4
CPA4Q9UI42 TBXAS1-210ENST00000458722 2057 ntTSL 2 BASIC17.54■□□□□ 0.4
CPA4Q9UI42 TK1-201ENST00000301634 1628 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
CPA4Q9UI42 SSC5D-202ENST00000587166 3017 ntAPPRIS ALT2 TSL 1 (best) BASIC17.53■□□□□ 0.4
CPA4Q9UI42 CA12-203ENST00000422263 2556 ntTSL 2 BASIC17.53■□□□□ 0.4
CPA4Q9UI42 XKR6-203ENST00000416569 3382 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
CPA4Q9UI42 ALOX12-AS1-201ENST00000399540 1730 ntTSL 2 BASIC17.53■□□□□ 0.4
CPA4Q9UI42 WRAP53-202ENST00000396463 1905 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
CPA4Q9UI42 NEIL2-204ENST00000455213 2323 ntAPPRIS P1 TSL 5 BASIC17.53■□□□□ 0.4
CPA4Q9UI42 AL035460.1-201ENST00000380593 1866 ntAPPRIS P1 TSL 2 BASIC17.53■□□□□ 0.4
CPA4Q9UI42 LDB3-208ENST00000623007 1664 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
CPA4Q9UI42 RAB40AL-201ENST00000218249 1029 ntAPPRIS P1 BASIC17.53■□□□□ 0.4
CPA4Q9UI42 TPD52L2-207ENST00000369927 1094 ntTSL 4 BASIC17.53■□□□□ 0.4
CPA4Q9UI42 AC007319.1-202ENST00000412276 829 ntTSL 5 BASIC17.53■□□□□ 0.4
CPA4Q9UI42 AL133481.1-201ENST00000438554 511 ntTSL 5 BASIC17.53■□□□□ 0.4
CPA4Q9UI42 MYO16-AS1-201ENST00000439299 580 ntTSL 5 BASIC17.53■□□□□ 0.4
CPA4Q9UI42 AC022616.1-201ENST00000518688 554 ntBASIC17.53■□□□□ 0.4
CPA4Q9UI42 TMEM258-204ENST00000537328 575 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
CPA4Q9UI42 SELENOW-204ENST00000595615 535 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
CPA4Q9UI42 DYRK1B-208ENST00000601972 772 ntTSL 2 BASIC17.53■□□□□ 0.4
CPA4Q9UI42 SELENOW-216ENST00000612212 875 ntTSL 5 BASIC17.53■□□□□ 0.4
CPA4Q9UI42 LINC01669-205ENST00000624561 713 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
CPA4Q9UI42 MBD3L2B-202ENST00000637800 774 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
CPA4Q9UI42 HMGXB3-206ENST00000613459 5567 ntAPPRIS ALT2 TSL 5 BASIC17.53■□□□□ 0.4
CPA4Q9UI42 GGNBP2-212ENST00000613102 2847 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
CPA4Q9UI42 CYP4F2-202ENST00000221700 2407 ntAPPRIS P2 TSL 1 (best) BASIC17.53■□□□□ 0.4
CPA4Q9UI42 RCC1-202ENST00000373832 2424 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
CPA4Q9UI42 FSD1L-206ENST00000481272 1804 ntTSL 2 BASIC17.53■□□□□ 0.4
CPA4Q9UI42 MBTD1-201ENST00000376381 1420 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
CPA4Q9UI42 MIF4GD-208ENST00000579297 1419 ntTSL 2 BASIC17.53■□□□□ 0.4
CPA4Q9UI42 PTPRU-202ENST00000373779 5579 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
CPA4Q9UI42 PPP1R26-202ENST00000401470 4769 ntAPPRIS P1 TSL 5 BASIC17.53■□□□□ 0.4
CPA4Q9UI42 DYRK3-201ENST00000367106 2329 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
CPA4Q9UI42 PRKRIP1-208ENST00000496391 3430 ntAPPRIS P1 TSL 2 BASIC17.53■□□□□ 0.4
CPA4Q9UI42 PRKCB-202ENST00000321728 2689 ntAPPRIS ALT1 TSL 1 (best) BASIC17.53■□□□□ 0.4
CPA4Q9UI42 NELFA-216ENST00000542778 2465 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
CPA4Q9UI42 SLC7A2-205ENST00000522656 2274 ntAPPRIS ALT1 TSL 1 (best) BASIC17.52■□□□□ 0.4
CPA4Q9UI42 ING5-201ENST00000313552 5196 ntAPPRIS P3 TSL 1 (best) BASIC17.52■□□□□ 0.4
CPA4Q9UI42 GPAT3-202ENST00000395226 2631 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
CPA4Q9UI42 TRPM2-AS-202ENST00000456880 2056 ntTSL 2 BASIC17.52■□□□□ 0.4
CPA4Q9UI42 IL12A-201ENST00000305579 1522 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
CPA4Q9UI42 WDR90-215ENST00000549091 5589 ntAPPRIS ALT2 TSL 5 BASIC17.52■□□□□ 0.4
CPA4Q9UI42 CCDC40-202ENST00000374876 2010 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
CPA4Q9UI42 CHST11-205ENST00000549260 5696 ntAPPRIS ALT1 TSL 1 (best) BASIC17.52■□□□□ 0.4
CPA4Q9UI42 RNF112-201ENST00000461366 3212 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
CPA4Q9UI42 SLC29A2-202ENST00000357440 2514 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
CPA4Q9UI42 SLC29A2-205ENST00000544554 2505 ntAPPRIS P1 TSL 2 BASIC17.52■□□□□ 0.4
CPA4Q9UI42 ZNF286A-204ENST00000464847 5616 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
CPA4Q9UI42 KLHL24-201ENST00000242810 2345 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
CPA4Q9UI42 ZGLP1-202ENST00000403903 2303 ntAPPRIS P2 TSL 1 (best) BASIC17.52■□□□□ 0.4
CPA4Q9UI42 MSI2-204ENST00000442934 1624 ntTSL 2 BASIC17.52■□□□□ 0.4
CPA4Q9UI42 NFU1-201ENST00000303698 1034 ntAPPRIS ALT2 TSL 1 (best) BASIC17.52■□□□□ 0.4
CPA4Q9UI42 FRMD3-202ENST00000328788 964 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
CPA4Q9UI42 SPDYE4-201ENST00000328794 923 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
CPA4Q9UI42 CSH2-203ENST00000392886 920 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
CPA4Q9UI42 STX1A-202ENST00000395154 1022 ntTSL 3 BASIC17.52■□□□□ 0.4
CPA4Q9UI42 AC073316.1-202ENST00000402115 988 ntTSL 5 BASIC17.52■□□□□ 0.4
CPA4Q9UI42 AL136309.1-201ENST00000403917 691 ntBASIC17.52■□□□□ 0.4
CPA4Q9UI42 TMEM177-203ENST00000409951 1216 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
CPA4Q9UI42 AC131097.3-203ENST00000420272 1193 ntTSL 5 BASIC17.52■□□□□ 0.4
CPA4Q9UI42 AL591684.1-201ENST00000434533 234 ntTSL 5 BASIC17.52■□□□□ 0.4
CPA4Q9UI42 AL136982.2-201ENST00000451760 234 ntTSL 5 BASIC17.52■□□□□ 0.4
CPA4Q9UI42 AC104784.1-201ENST00000473096 294 ntBASIC17.52■□□□□ 0.4
CPA4Q9UI42 LY6E-208ENST00000520531 490 ntTSL 2 BASIC17.52■□□□□ 0.4
CPA4Q9UI42 AC073573.1-201ENST00000550908 481 ntTSL 3 BASIC17.52■□□□□ 0.4
CPA4Q9UI42 MAX-211ENST00000555667 574 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
Retrieved 100 of 98,524 protein–RNA pairs in 33.8 ms