Protein–RNA interactions for Protein: Q9UDT6

CLIP2, CAP-Gly domain-containing linker protein 2, humanhuman

Predictions only

Length 1,046 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP2Q9UDT6 TOMM40-207ENST00000592434 3415 ntAPPRIS ALT2 TSL 2 BASIC18.51■□□□□ 0.55
CLIP2Q9UDT6 NOTO-201ENST00000398468 2749 ntAPPRIS P1 TSL 2 BASIC18.51■□□□□ 0.55
CLIP2Q9UDT6 CCT7-216ENST00000540468 1674 ntTSL 2 BASIC18.5■□□□□ 0.55
CLIP2Q9UDT6 AC073264.3-201ENST00000636941 2577 ntAPPRIS P1 TSL 5 BASIC18.5■□□□□ 0.55
CLIP2Q9UDT6 DRC7-201ENST00000336825 2680 ntAPPRIS ALT2 TSL 2 BASIC18.5■□□□□ 0.55
CLIP2Q9UDT6 ARHGAP45-212ENST00000590577 3218 ntTSL 2 BASIC18.5■□□□□ 0.55
CLIP2Q9UDT6 TGFBR2-202ENST00000359013 4605 ntAPPRIS ALT2 TSL 1 (best) BASIC18.5■□□□□ 0.55
CLIP2Q9UDT6 AC005906.2-217ENST00000639573 1711 ntTSL 5 BASIC18.5■□□□□ 0.55
CLIP2Q9UDT6 TNRC18P2-201ENST00000417666 2714 ntBASIC18.5■□□□□ 0.55
CLIP2Q9UDT6 ZNF746-201ENST00000340622 3806 ntAPPRIS P3 TSL 1 (best) BASIC18.5■□□□□ 0.55
CLIP2Q9UDT6 NXT2-202ENST00000372103 1085 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
CLIP2Q9UDT6 WDR38-201ENST00000373574 1252 ntAPPRIS P3 TSL 1 (best) BASIC18.5■□□□□ 0.55
CLIP2Q9UDT6 AL512384.1-201ENST00000406683 331 ntBASIC18.5■□□□□ 0.55
CLIP2Q9UDT6 TEX26-AS1-201ENST00000411835 1203 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
CLIP2Q9UDT6 AC068898.1-201ENST00000440750 335 ntTSL 3 BASIC18.5■□□□□ 0.55
CLIP2Q9UDT6 GALT-202ENST00000450095 1280 ntTSL 2 BASIC18.5■□□□□ 0.55
CLIP2Q9UDT6 AC006064.3-201ENST00000537921 477 ntTSL 4 BASIC18.5■□□□□ 0.55
CLIP2Q9UDT6 CSF1R-209ENST00000543093 921 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
CLIP2Q9UDT6 LINC02356-202ENST00000552663 314 ntTSL 3 BASIC18.5■□□□□ 0.55
CLIP2Q9UDT6 MRPL52-211ENST00000555536 451 ntTSL 3 BASIC18.5■□□□□ 0.55
CLIP2Q9UDT6 AC008758.5-201ENST00000595562 617 ntAPPRIS P1 TSL 4 BASIC18.5■□□□□ 0.55
CLIP2Q9UDT6 OR2T27-203ENST00000641652 1285 ntAPPRIS P1 BASIC18.5■□□□□ 0.55
CLIP2Q9UDT6 DHX36-201ENST00000308361 3487 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
CLIP2Q9UDT6 ZNF180-202ENST00000391956 3049 ntAPPRIS ALT2 TSL 2 BASIC18.5■□□□□ 0.55
CLIP2Q9UDT6 ARMC5-204ENST00000538189 3017 ntAPPRIS ALT2 TSL 2 BASIC18.5■□□□□ 0.55
CLIP2Q9UDT6 SLC22A23-210ENST00000490273 2043 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
CLIP2Q9UDT6 CD300LG-206ENST00000588884 1459 ntAPPRIS ALT2 TSL 2 BASIC18.5■□□□□ 0.55
CLIP2Q9UDT6 CPEB2-201ENST00000259997 5612 ntAPPRIS ALT2 TSL 5 BASIC18.5■□□□□ 0.55
CLIP2Q9UDT6 TBL3-205ENST00000568546 6803 ntAPPRIS P2 TSL 1 (best) BASIC18.5■□□□□ 0.55
CLIP2Q9UDT6 BCL11A-203ENST00000358510 2697 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
CLIP2Q9UDT6 TMEM139-205ENST00000410004 2114 ntAPPRIS P1 TSL 2 BASIC18.5■□□□□ 0.55
CLIP2Q9UDT6 PCBP4-205ENST00000461554 2147 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
CLIP2Q9UDT6 ATP6AP2-217ENST00000636580 2337 ntAPPRIS P2 TSL 1 (best) BASIC18.5■□□□□ 0.55
CLIP2Q9UDT6 COLQ-206ENST00000603808 1668 ntAPPRIS ALT1 TSL 1 (best) BASIC18.5■□□□□ 0.55
CLIP2Q9UDT6 SLC30A5-202ENST00000396591 4360 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
CLIP2Q9UDT6 RAB1A-203ENST00000409784 2447 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
CLIP2Q9UDT6 PITPNM1-202ENST00000436757 4216 ntAPPRIS ALT1 TSL 1 (best) BASIC18.5■□□□□ 0.55
CLIP2Q9UDT6 PKP4-AS1-203ENST00000629904 1951 ntTSL 5 BASIC18.5■□□□□ 0.55
CLIP2Q9UDT6 ADAMTS13-201ENST00000355699 4442 ntAPPRIS ALT2 TSL 1 (best) BASIC18.5■□□□□ 0.55
CLIP2Q9UDT6 FGFR1OP2-201ENST00000229395 2924 ntTSL 2 BASIC18.5■□□□□ 0.55
CLIP2Q9UDT6 SLC6A13-201ENST00000343164 2185 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
CLIP2Q9UDT6 GABRA5-202ENST00000355395 2183 ntAPPRIS P1 TSL 5 BASIC18.49■□□□□ 0.55
CLIP2Q9UDT6 KLRG1-201ENST00000266551 1335 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
CLIP2Q9UDT6 CYB5R2-204ENST00000524790 1338 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
CLIP2Q9UDT6 ATG10-202ENST00000355178 1438 ntTSL 2 BASIC18.49■□□□□ 0.55
CLIP2Q9UDT6 NORAD-201ENST00000565493 5339 ntBASIC18.49■□□□□ 0.55
CLIP2Q9UDT6 RWDD1-202ENST00000466444 5522 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
CLIP2Q9UDT6 AC009802.1-201ENST00000637973 1609 ntTSL 5 BASIC18.49■□□□□ 0.55
CLIP2Q9UDT6 AC099063.4-201ENST00000641099 1602 ntBASIC18.49■□□□□ 0.55
CLIP2Q9UDT6 DHFR-201ENST00000439211 3917 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
CLIP2Q9UDT6 CYP2R1-207ENST00000532378 1746 ntTSL 5 BASIC18.49■□□□□ 0.55
CLIP2Q9UDT6 AC069224.1-201ENST00000566372 1715 ntBASIC18.49■□□□□ 0.55
CLIP2Q9UDT6 FBXO28-201ENST00000366862 5451 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
CLIP2Q9UDT6 PLAA-205ENST00000520884 2041 ntTSL 2 BASIC18.49■□□□□ 0.55
CLIP2Q9UDT6 TLE3-223ENST00000560939 3021 ntTSL 5 BASIC18.49■□□□□ 0.55
CLIP2Q9UDT6 KRTAP10-1-201ENST00000400375 1215 ntAPPRIS P1 BASIC18.49■□□□□ 0.55
CLIP2Q9UDT6 ITPR1-AS1-201ENST00000412804 858 ntTSL 2 BASIC18.49■□□□□ 0.55
CLIP2Q9UDT6 AL136311.1-206ENST00000416069 899 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
CLIP2Q9UDT6 AL845321.1-202ENST00000432011 786 ntTSL 5 BASIC18.49■□□□□ 0.55
CLIP2Q9UDT6 AC124944.1-201ENST00000448113 625 ntTSL 2 BASIC18.49■□□□□ 0.55
CLIP2Q9UDT6 GIMAP3P-201ENST00000495150 836 ntBASIC18.49■□□□□ 0.55
CLIP2Q9UDT6 SLED1-202ENST00000512051 380 ntBASIC18.49■□□□□ 0.55
CLIP2Q9UDT6 EHF-205ENST00000527935 557 ntTSL 2 BASIC18.49■□□□□ 0.55
CLIP2Q9UDT6 AC005342.2-201ENST00000544163 315 ntTSL 3 BASIC18.49■□□□□ 0.55
CLIP2Q9UDT6 AC092552.1-201ENST00000547243 906 ntBASIC18.49■□□□□ 0.55
CLIP2Q9UDT6 AC016727.1-204ENST00000578974 420 ntTSL 3 BASIC18.49■□□□□ 0.55
CLIP2Q9UDT6 AC124287.1-201ENST00000582249 838 ntTSL 3 BASIC18.49■□□□□ 0.55
CLIP2Q9UDT6 AC010327.1-201ENST00000587871 975 ntAPPRIS P1 TSL 5 BASIC18.49■□□□□ 0.55
CLIP2Q9UDT6 GNRHR2-204ENST00000604273 1078 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
CLIP2Q9UDT6 NDUFS7-218ENST00000618074 688 ntTSL 5 BASIC18.49■□□□□ 0.55
CLIP2Q9UDT6 NDUFS7-219ENST00000620479 754 ntTSL 5 BASIC18.49■□□□□ 0.55
CLIP2Q9UDT6 RAPSN-202ENST00000352508 1452 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
CLIP2Q9UDT6 UVSSA-208ENST00000511563 1494 ntAPPRIS ALT2 TSL 2 BASIC18.49■□□□□ 0.55
CLIP2Q9UDT6 LINC00221-201ENST00000603633 1656 ntTSL 2 BASIC18.49■□□□□ 0.55
CLIP2Q9UDT6 SPATA21-205ENST00000540400 1773 ntAPPRIS ALT2 TSL 1 (best) BASIC18.49■□□□□ 0.55
CLIP2Q9UDT6 NSUN5-203ENST00000428206 2269 ntAPPRIS ALT2 TSL 2 BASIC18.49■□□□□ 0.55
CLIP2Q9UDT6 GRAMD2B-201ENST00000285689 3175 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
CLIP2Q9UDT6 MCM4-201ENST00000262105 4183 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
CLIP2Q9UDT6 MYH14-204ENST00000440075 4247 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
CLIP2Q9UDT6 QRICH1-202ENST00000395443 3549 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
CLIP2Q9UDT6 COL26A1-201ENST00000313669 3033 ntAPPRIS P2 TSL 1 (best) BASIC18.49■□□□□ 0.55
CLIP2Q9UDT6 MLKL-202ENST00000308807 2523 ntAPPRIS P1 TSL 2 BASIC18.49■□□□□ 0.55
CLIP2Q9UDT6 WARS-232ENST00000556645 2508 ntTSL 5 BASIC18.49■□□□□ 0.55
CLIP2Q9UDT6 SLC7A4-201ENST00000382932 2313 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
CLIP2Q9UDT6 BANK1-207ENST00000508653 2115 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
CLIP2Q9UDT6 C7orf43-207ENST00000457641 2005 ntTSL 5 BASIC18.49■□□□□ 0.55
CLIP2Q9UDT6 MAPKAPK5-207ENST00000551404 1630 ntAPPRIS P4 TSL 5 BASIC18.49■□□□□ 0.55
CLIP2Q9UDT6 CDPF1-204ENST00000404744 1541 ntTSL 3 BASIC18.49■□□□□ 0.55
CLIP2Q9UDT6 SAMD4A-208ENST00000555192 1337 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
CLIP2Q9UDT6 ZNF662-201ENST00000328199 3186 ntAPPRIS P1 TSL 5 BASIC18.48■□□□□ 0.55
CLIP2Q9UDT6 ILF3-210ENST00000588657 2697 ntAPPRIS ALT2 TSL 5 BASIC18.48■□□□□ 0.55
CLIP2Q9UDT6 ARHGAP9-201ENST00000393791 2597 ntAPPRIS P3 TSL 1 (best) BASIC18.48■□□□□ 0.55
CLIP2Q9UDT6 ARID4B-202ENST00000349213 5811 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
CLIP2Q9UDT6 CLEC18A-203ENST00000449317 1875 ntAPPRIS ALT2 TSL 5 BASIC18.48■□□□□ 0.55
CLIP2Q9UDT6 PAM-206ENST00000438793 5432 ntAPPRIS ALT1 TSL 1 (best) BASIC18.48■□□□□ 0.55
CLIP2Q9UDT6 VGLL4-202ENST00000413604 1554 ntTSL 2 BASIC18.48■□□□□ 0.55
CLIP2Q9UDT6 PAX6-276ENST00000640684 1557 ntTSL 5 BASIC18.48■□□□□ 0.55
CLIP2Q9UDT6 WIPF3-202ENST00000409123 3491 ntAPPRIS ALT2 TSL 5 BASIC18.48■□□□□ 0.55
CLIP2Q9UDT6 ABHD11-201ENST00000222800 1483 ntAPPRIS P3 TSL 1 (best) BASIC18.48■□□□□ 0.55
CLIP2Q9UDT6 OSBPL6-203ENST00000357080 2217 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
Retrieved 100 of 98,524 protein–RNA pairs in 64.4 ms