Protein–RNA interactions for Protein: Q9UBX2

DUX4, Double homeobox protein 4, humanhuman

Predictions only

Length 424 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DUX4Q9UBX2 MEIS3-206ENST00000559524 1828 ntAPPRIS P3 TSL 2 BASIC13.82□□□□□ -0.2
DUX4Q9UBX2 CD8A-201ENST00000283635 2873 ntAPPRIS P4 TSL 1 (best) BASIC13.82□□□□□ -0.2
DUX4Q9UBX2 CDC42EP4-202ENST00000439510 2879 ntTSL 2 BASIC13.82□□□□□ -0.2
DUX4Q9UBX2 AC053503.2-201ENST00000420563 1598 ntTSL 2 BASIC13.82□□□□□ -0.2
DUX4Q9UBX2 CCDC90B-202ENST00000455220 1550 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
DUX4Q9UBX2 ACTL7B-201ENST00000374667 2379 ntAPPRIS P1 BASIC13.82□□□□□ -0.2
DUX4Q9UBX2 FSTL3-206ENST00000592947 2144 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
DUX4Q9UBX2 CFAP53-201ENST00000398545 1851 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
DUX4Q9UBX2 DEF8-225ENST00000569453 1852 ntAPPRIS P4 TSL 2 BASIC13.82□□□□□ -0.2
DUX4Q9UBX2 AL512625.3-203ENST00000445604 1602 ntTSL 5 BASIC13.82□□□□□ -0.2
DUX4Q9UBX2 MTMR3-204ENST00000401950 6018 ntAPPRIS P3 TSL 1 (best) BASIC13.82□□□□□ -0.2
DUX4Q9UBX2 TECPR1-204ENST00000447648 6564 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
DUX4Q9UBX2 HTR7-201ENST00000277874 3028 ntAPPRIS P4 TSL 1 (best) BASIC13.82□□□□□ -0.2
DUX4Q9UBX2 ICAM4-203ENST00000393717 1390 ntAPPRIS ALT2 TSL 2 BASIC13.82□□□□□ -0.2
DUX4Q9UBX2 RGR-202ENST00000359452 2247 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
DUX4Q9UBX2 PAAF1-205ENST00000535604 1695 ntTSL 5 BASIC13.82□□□□□ -0.2
DUX4Q9UBX2 UCKL1-203ENST00000369908 1954 ntAPPRIS P1 TSL 2 BASIC13.82□□□□□ -0.2
DUX4Q9UBX2 CTCFL-215ENST00000608158 1984 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
DUX4Q9UBX2 PSEN2-211ENST00000626989 1972 ntTSL 5 BASIC13.82□□□□□ -0.2
DUX4Q9UBX2 NTNG1-203ENST00000370066 1443 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
DUX4Q9UBX2 RIMS3-201ENST00000372683 1408 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
DUX4Q9UBX2 CDKN2AIP-201ENST00000302350 2646 ntTSL 2 BASIC13.81□□□□□ -0.2
DUX4Q9UBX2 PAX3-207ENST00000409551 1782 ntAPPRIS ALT1 TSL 1 (best) BASIC13.81□□□□□ -0.2
DUX4Q9UBX2 AP005329.2-201ENST00000580139 1771 ntTSL 2 BASIC13.81□□□□□ -0.2
DUX4Q9UBX2 GPR17-201ENST00000272644 2062 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
DUX4Q9UBX2 CEP78-203ENST00000376598 2404 ntAPPRIS ALT2 TSL 5 BASIC13.81□□□□□ -0.2
DUX4Q9UBX2 AL359183.1-201ENST00000623796 2132 ntBASIC13.81□□□□□ -0.2
DUX4Q9UBX2 ADAM6-201ENST00000606026 1843 ntTSL 2 BASIC13.81□□□□□ -0.2
DUX4Q9UBX2 NQO2-201ENST00000338130 1515 ntAPPRIS P1 TSL 2 BASIC13.81□□□□□ -0.2
DUX4Q9UBX2 GMPPA-202ENST00000341142 1524 ntAPPRIS P1 TSL 5 BASIC13.81□□□□□ -0.2
DUX4Q9UBX2 GOLGA2P2Y-202ENST00000423852 1506 ntBASIC13.81□□□□□ -0.2
DUX4Q9UBX2 FAM60A-203ENST00000454658 1555 ntAPPRIS P1 TSL 2 BASIC13.81□□□□□ -0.2
DUX4Q9UBX2 FIGLA-201ENST00000332372 722 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
DUX4Q9UBX2 EXOSC8-202ENST00000389704 1198 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
DUX4Q9UBX2 PIK3CD-AS2-201ENST00000415330 939 ntTSL 5 BASIC13.81□□□□□ -0.2
DUX4Q9UBX2 GNB2-205ENST00000419828 1285 ntTSL 5 BASIC13.81□□□□□ -0.2
DUX4Q9UBX2 KRT8P48-201ENST00000515599 1220 ntBASIC13.81□□□□□ -0.2
DUX4Q9UBX2 LINC01485-205ENST00000523617 586 ntTSL 2 BASIC13.81□□□□□ -0.2
DUX4Q9UBX2 GMDS-AS1-205ENST00000529893 900 ntTSL 5 BASIC13.81□□□□□ -0.2
DUX4Q9UBX2 OTUB2-202ENST00000553723 708 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
DUX4Q9UBX2 MARVELD3-206ENST00000567566 850 ntAPPRIS ALT2 TSL 1 (best) BASIC13.81□□□□□ -0.2
DUX4Q9UBX2 FLYWCH2-203ENST00000572006 754 ntAPPRIS ALT2 TSL 2 BASIC13.81□□□□□ -0.2
DUX4Q9UBX2 TMEM88-202ENST00000574668 510 ntTSL 2 BASIC13.81□□□□□ -0.2
DUX4Q9UBX2 MIR3687-2-201ENST00000577708 61 ntBASIC13.81□□□□□ -0.2
DUX4Q9UBX2 GPR42-202ENST00000597214 1182 ntAPPRIS P1 BASIC13.81□□□□□ -0.2
DUX4Q9UBX2 LINC00623-201ENST00000613486 486 ntTSL 5 BASIC13.81□□□□□ -0.2
DUX4Q9UBX2 MIR3687-1-201ENST00000614492 61 ntBASIC13.81□□□□□ -0.2
DUX4Q9UBX2 ELL2P1-201ENST00000413990 1906 ntBASIC13.81□□□□□ -0.2
DUX4Q9UBX2 TVP23C-203ENST00000428082 1911 ntAPPRIS ALT1 TSL 1 (best) BASIC13.81□□□□□ -0.2
DUX4Q9UBX2 CEP68-202ENST00000377990 5847 ntAPPRIS P3 TSL 1 (best) BASIC13.81□□□□□ -0.2
DUX4Q9UBX2 ACOX3-203ENST00000503233 2253 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
DUX4Q9UBX2 DRG2-201ENST00000225729 1964 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
DUX4Q9UBX2 LPAR1-203ENST00000374431 3637 ntAPPRIS P2 TSL 1 (best) BASIC13.81□□□□□ -0.2
DUX4Q9UBX2 SH2D2A-202ENST00000368199 1658 ntAPPRIS P3 TSL 1 (best) BASIC13.81□□□□□ -0.2
DUX4Q9UBX2 LPCAT2-201ENST00000262134 5391 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
DUX4Q9UBX2 STAT1-202ENST00000392322 2716 ntAPPRIS ALT1 TSL 1 (best) BASIC13.81□□□□□ -0.2
DUX4Q9UBX2 ZNF536-201ENST00000355537 4945 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
DUX4Q9UBX2 PCM1-206ENST00000518537 2171 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
DUX4Q9UBX2 MYOD1-201ENST00000250003 1801 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
DUX4Q9UBX2 LINC00599-203ENST00000519461 2922 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
DUX4Q9UBX2 DHRS1-201ENST00000288111 1480 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
DUX4Q9UBX2 CACNA1G-230ENST00000514717 6699 ntAPPRIS ALT2 TSL 1 (best) BASIC13.8□□□□□ -0.2
DUX4Q9UBX2 DCP1B-202ENST00000535873 2231 ntTSL 2 BASIC13.8□□□□□ -0.2
DUX4Q9UBX2 TRPC6-206ENST00000532133 2648 ntTSL 5 BASIC13.8□□□□□ -0.2
DUX4Q9UBX2 AKAP13-201ENST00000361243 9468 ntAPPRIS P4 TSL 1 (best) BASIC13.8□□□□□ -0.2
DUX4Q9UBX2 WDR73-202ENST00000434634 5387 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
DUX4Q9UBX2 CRHR2-208ENST00000506074 3109 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
DUX4Q9UBX2 HAPLN3-201ENST00000359595 1980 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
DUX4Q9UBX2 ARPP19-202ENST00000561650 3245 ntTSL 2 BASIC13.8□□□□□ -0.2
DUX4Q9UBX2 IRAK1-204ENST00000393687 2049 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
DUX4Q9UBX2 PLAA-205ENST00000520884 2041 ntTSL 2 BASIC13.8□□□□□ -0.2
DUX4Q9UBX2 TMEM86B-201ENST00000327042 1637 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
DUX4Q9UBX2 DNAJC13-201ENST00000260818 7730 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
DUX4Q9UBX2 FAM160B1-203ENST00000369250 2870 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
DUX4Q9UBX2 VWA7-201ENST00000375688 2881 ntAPPRIS P1 TSL 5 BASIC13.8□□□□□ -0.2
DUX4Q9UBX2 EPB41L1-202ENST00000338074 6266 ntAPPRIS P3 TSL 1 (best) BASIC13.8□□□□□ -0.2
DUX4Q9UBX2 LETM2-201ENST00000297720 1693 ntTSL 2 BASIC13.8□□□□□ -0.2
DUX4Q9UBX2 C12orf40-202ENST00000405531 1656 ntAPPRIS ALT2 TSL 1 (best) BASIC13.8□□□□□ -0.2
DUX4Q9UBX2 NARF-206ENST00000457415 1668 ntTSL 5 BASIC13.8□□□□□ -0.2
DUX4Q9UBX2 LTC4S-201ENST00000292596 666 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
DUX4Q9UBX2 CRYBA2-201ENST00000295728 893 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
DUX4Q9UBX2 SNHG5-201ENST00000369605 1032 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
DUX4Q9UBX2 DPM2-202ENST00000373110 738 ntTSL 2 BASIC13.8□□□□□ -0.2
DUX4Q9UBX2 MIR1233-2-201ENST00000408138 82 ntBASIC13.8□□□□□ -0.2
DUX4Q9UBX2 MIR1233-1-201ENST00000408722 82 ntBASIC13.8□□□□□ -0.2
DUX4Q9UBX2 CRIP1-203ENST00000409393 677 ntAPPRIS P1 TSL 3 BASIC13.8□□□□□ -0.2
DUX4Q9UBX2 COA5-202ENST00000409997 557 ntTSL 4 BASIC13.8□□□□□ -0.2
DUX4Q9UBX2 AL671277.1-201ENST00000429656 993 ntBASIC13.8□□□□□ -0.2
DUX4Q9UBX2 CACNA1G-208ENST00000442258 7226 ntAPPRIS ALT2 TSL 1 (best) BASIC13.8□□□□□ -0.2
DUX4Q9UBX2 TWIST2-201ENST00000448943 1176 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
DUX4Q9UBX2 TIMM8BP1-201ENST00000452384 211 ntBASIC13.8□□□□□ -0.2
DUX4Q9UBX2 HELT-204ENST00000515777 841 ntAPPRIS P4 TSL 1 (best) BASIC13.8□□□□□ -0.2
DUX4Q9UBX2 AL135744.1-201ENST00000565098 629 ntBASIC13.8□□□□□ -0.2
DUX4Q9UBX2 COQ7-208ENST00000568985 714 ntAPPRIS P3 TSL 2 BASIC13.8□□□□□ -0.2
DUX4Q9UBX2 AC004597.1-201ENST00000595525 561 ntTSL 4 BASIC13.8□□□□□ -0.2
DUX4Q9UBX2 SIGLEC7-205ENST00000600577 616 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
DUX4Q9UBX2 CPEB1-211ENST00000615198 2112 ntAPPRIS P2 TSL 1 (best) BASIC13.8□□□□□ -0.2
DUX4Q9UBX2 FBXO44-204ENST00000376762 1734 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
DUX4Q9UBX2 VEPH1-218ENST00000494677 1714 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
DUX4Q9UBX2 MPP1-205ENST00000413259 2195 ntTSL 2 BASIC13.8□□□□□ -0.2
Retrieved 100 of 98,524 protein–RNA pairs in 29.3 ms