Protein–RNA interactions for Protein: Q9NUP1

BLOC1S4, Biogenesis of lysosome-related organelles complex 1 subunit 4, humanhuman

Predictions only

Length 217 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BLOC1S4Q9NUP1 AL359258.3-201ENST00000622910 2331 ntBASIC17.26■□□□□ 0.35
BLOC1S4Q9NUP1 FOXRED1-213ENST00000532125 1825 ntAPPRIS ALT2 TSL 2 BASIC17.26■□□□□ 0.35
BLOC1S4Q9NUP1 SAMD4A-208ENST00000555192 1337 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
BLOC1S4Q9NUP1 P3H1-201ENST00000236040 2993 ntAPPRIS ALT2 TSL 2 BASIC17.26■□□□□ 0.35
BLOC1S4Q9NUP1 CTSD-201ENST00000236671 2123 ntAPPRIS P2 TSL 1 (best) BASIC17.26■□□□□ 0.35
BLOC1S4Q9NUP1 TMEM222-211ENST00000611517 1613 ntAPPRIS P2 TSL 1 (best) BASIC17.26■□□□□ 0.35
BLOC1S4Q9NUP1 MTA2-201ENST00000278823 3058 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
BLOC1S4Q9NUP1 REXO1L4P-201ENST00000605109 1937 ntBASIC17.26■□□□□ 0.35
BLOC1S4Q9NUP1 ATP1A1-AS1-202ENST00000369492 1011 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
BLOC1S4Q9NUP1 PKIG-202ENST00000372886 1180 ntAPPRIS P1 TSL 2 BASIC17.26■□□□□ 0.35
BLOC1S4Q9NUP1 FADS2-205ENST00000517839 469 ntTSL 3 BASIC17.26■□□□□ 0.35
BLOC1S4Q9NUP1 EVX1-AS-202ENST00000519050 576 ntTSL 4 BASIC17.26■□□□□ 0.35
BLOC1S4Q9NUP1 AC055876.2-201ENST00000531834 546 ntBASIC17.26■□□□□ 0.35
BLOC1S4Q9NUP1 LINC01975-201ENST00000571890 549 ntTSL 4 BASIC17.26■□□□□ 0.35
BLOC1S4Q9NUP1 ZNF226-211ENST00000588742 447 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
BLOC1S4Q9NUP1 BRI3BPP1-201ENST00000594224 787 ntBASIC17.26■□□□□ 0.35
BLOC1S4Q9NUP1 AC011467.4-201ENST00000594891 528 ntBASIC17.26■□□□□ 0.35
BLOC1S4Q9NUP1 CHCHD2P3-201ENST00000603038 451 ntBASIC17.26■□□□□ 0.35
BLOC1S4Q9NUP1 DUSP13-214ENST00000607131 1019 ntAPPRIS P3 TSL 1 (best) BASIC17.26■□□□□ 0.35
BLOC1S4Q9NUP1 BARD1-209ENST00000613192 703 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
BLOC1S4Q9NUP1 LINC01002-214ENST00000632102 561 ntTSL 4 BASIC17.26■□□□□ 0.35
BLOC1S4Q9NUP1 CNOT8-201ENST00000285896 2528 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
BLOC1S4Q9NUP1 PEX11B-201ENST00000369306 1740 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
BLOC1S4Q9NUP1 BICDL1-201ENST00000397558 3055 ntAPPRIS P1 TSL 5 BASIC17.26■□□□□ 0.35
BLOC1S4Q9NUP1 PACSIN2-201ENST00000263246 3249 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
BLOC1S4Q9NUP1 TBX10-201ENST00000335385 1548 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
BLOC1S4Q9NUP1 POMK-203ENST00000614426 1527 ntAPPRIS P1 TSL 4 BASIC17.26■□□□□ 0.35
BLOC1S4Q9NUP1 UCK1-203ENST00000372211 2114 ntTSL 3 BASIC17.26■□□□□ 0.35
BLOC1S4Q9NUP1 NOMO2-203ENST00000543392 3765 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
BLOC1S4Q9NUP1 HNRNPR-204ENST00000427764 1788 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
BLOC1S4Q9NUP1 LHCGR-202ENST00000401907 1477 ntTSL 5 BASIC17.25■□□□□ 0.35
BLOC1S4Q9NUP1 DUSP22-202ENST00000419235 3098 ntAPPRIS P1 TSL 2 BASIC17.25■□□□□ 0.35
BLOC1S4Q9NUP1 ATE1-209ENST00000543447 4826 ntTSL 2 BASIC17.25■□□□□ 0.35
BLOC1S4Q9NUP1 FAN1-207ENST00000565466 2304 ntTSL 2 BASIC17.25■□□□□ 0.35
BLOC1S4Q9NUP1 SLC36A1-207ENST00000520701 2005 ntAPPRIS P1 TSL 5 BASIC17.25■□□□□ 0.35
BLOC1S4Q9NUP1 ADAM23-201ENST00000264377 6330 ntAPPRIS P2 TSL 1 (best) BASIC17.25■□□□□ 0.35
BLOC1S4Q9NUP1 WRAP53-210ENST00000534050 1736 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
BLOC1S4Q9NUP1 OSBP2-209ENST00000438716 2747 ntAPPRIS ALT2 TSL 2 BASIC17.25■□□□□ 0.35
BLOC1S4Q9NUP1 GLUL-201ENST00000311223 4719 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
BLOC1S4Q9NUP1 METTL17-202ENST00000382985 1586 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
BLOC1S4Q9NUP1 AC004922.1-201ENST00000638617 2430 ntAPPRIS P1 TSL 5 BASIC17.25■□□□□ 0.35
BLOC1S4Q9NUP1 SLC8B1-201ENST00000202831 2975 ntAPPRIS P1 TSL 5 BASIC17.25■□□□□ 0.35
BLOC1S4Q9NUP1 MIOX-201ENST00000216075 1130 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
BLOC1S4Q9NUP1 AIP-201ENST00000279146 1221 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
BLOC1S4Q9NUP1 NUS1-201ENST00000368494 4676 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
BLOC1S4Q9NUP1 PDGFB-202ENST00000381551 1125 ntTSL 5 BASIC17.25■□□□□ 0.35
BLOC1S4Q9NUP1 MEP1AP4-201ENST00000423244 1087 ntBASIC17.25■□□□□ 0.35
BLOC1S4Q9NUP1 KCNQ1DN-201ENST00000441418 1093 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
BLOC1S4Q9NUP1 AC026410.3-201ENST00000514280 936 ntBASIC17.25■□□□□ 0.35
BLOC1S4Q9NUP1 LINC01605-204ENST00000522718 1093 ntTSL 3 BASIC17.25■□□□□ 0.35
BLOC1S4Q9NUP1 TMEM218-210ENST00000529609 734 ntTSL 3 BASIC17.25■□□□□ 0.35
BLOC1S4Q9NUP1 API5-211ENST00000534695 560 ntTSL 5 BASIC17.25■□□□□ 0.35
BLOC1S4Q9NUP1 GABARAPL1-217ENST00000545887 571 ntAPPRIS P1 TSL 3 BASIC17.25■□□□□ 0.35
BLOC1S4Q9NUP1 LINC01220-201ENST00000558575 715 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
BLOC1S4Q9NUP1 ELOF1-205ENST00000589171 743 ntTSL 3 BASIC17.25■□□□□ 0.35
BLOC1S4Q9NUP1 AC010503.1-201ENST00000596027 520 ntTSL 5 BASIC17.25■□□□□ 0.35
BLOC1S4Q9NUP1 AL132655.2-201ENST00000596276 594 ntBASIC17.25■□□□□ 0.35
BLOC1S4Q9NUP1 AL049840.4-201ENST00000602422 811 ntBASIC17.25■□□□□ 0.35
BLOC1S4Q9NUP1 SLC22A7-203ENST00000372589 2549 ntAPPRIS ALT2 TSL 2 BASIC17.25■□□□□ 0.35
BLOC1S4Q9NUP1 SLC26A10-201ENST00000320442 2389 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
BLOC1S4Q9NUP1 ZC2HC1C-202ENST00000439583 1509 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
BLOC1S4Q9NUP1 AMT-232ENST00000636199 1546 ntTSL 5 BASIC17.25■□□□□ 0.35
BLOC1S4Q9NUP1 WAC-203ENST00000354911 3042 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
BLOC1S4Q9NUP1 STRA6-218ENST00000574278 2455 ntTSL 2 BASIC17.25■□□□□ 0.35
BLOC1S4Q9NUP1 PAK4-205ENST00000593690 3025 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
BLOC1S4Q9NUP1 UBAC2-AS1-201ENST00000426037 1771 ntTSL 2 BASIC17.25■□□□□ 0.35
BLOC1S4Q9NUP1 TNFSF13-202ENST00000349228 2036 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
BLOC1S4Q9NUP1 SYT5-207ENST00000590851 3619 ntTSL 2 BASIC17.25■□□□□ 0.35
BLOC1S4Q9NUP1 VASH1-203ENST00000554237 1462 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
BLOC1S4Q9NUP1 KRT9-202ENST00000588431 1493 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
BLOC1S4Q9NUP1 RNASEH1-201ENST00000315212 1887 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
BLOC1S4Q9NUP1 TPO-203ENST00000346956 2923 ntTSL 5 BASIC17.24■□□□□ 0.35
BLOC1S4Q9NUP1 POR-201ENST00000394893 2532 ntTSL 5 BASIC17.24■□□□□ 0.35
BLOC1S4Q9NUP1 LINC01136-203ENST00000457348 2539 ntTSL 2 BASIC17.24■□□□□ 0.35
BLOC1S4Q9NUP1 LAT2-202ENST00000344995 2363 ntAPPRIS P2 TSL 1 (best) BASIC17.24■□□□□ 0.35
BLOC1S4Q9NUP1 PUS7-202ENST00000469408 2356 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
BLOC1S4Q9NUP1 PNPLA3-203ENST00000423180 2222 ntTSL 2 BASIC17.24■□□□□ 0.35
BLOC1S4Q9NUP1 MGRN1-206ENST00000586183 1841 ntAPPRIS ALT2 TSL 5 BASIC17.24■□□□□ 0.35
BLOC1S4Q9NUP1 TCP1-201ENST00000321394 2499 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
BLOC1S4Q9NUP1 ASIC1-202ENST00000447966 3778 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
BLOC1S4Q9NUP1 REXO1L2P-201ENST00000425429 2069 ntBASIC17.24■□□□□ 0.35
BLOC1S4Q9NUP1 GRN-201ENST00000053867 2342 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
BLOC1S4Q9NUP1 EXO5-203ENST00000372703 2567 ntAPPRIS P1 TSL 2 BASIC17.24■□□□□ 0.35
BLOC1S4Q9NUP1 ACRBP-201ENST00000229243 1933 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
BLOC1S4Q9NUP1 KITLG-202ENST00000347404 1948 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
BLOC1S4Q9NUP1 LEKR1-209ENST00000491763 1940 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
BLOC1S4Q9NUP1 ZBED1P1-201ENST00000502364 1930 ntBASIC17.24■□□□□ 0.35
BLOC1S4Q9NUP1 CROCCP3-201ENST00000263511 5368 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
BLOC1S4Q9NUP1 TRIM74-202ENST00000395244 1286 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
BLOC1S4Q9NUP1 DFFBP1-201ENST00000433250 979 ntBASIC17.24■□□□□ 0.35
BLOC1S4Q9NUP1 AL691459.1-201ENST00000438589 407 ntTSL 3 BASIC17.24■□□□□ 0.35
BLOC1S4Q9NUP1 TRIM73-204ENST00000447409 1286 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
BLOC1S4Q9NUP1 CCDC159-201ENST00000458408 1062 ntAPPRIS P1 TSL 5 BASIC17.24■□□□□ 0.35
BLOC1S4Q9NUP1 VDAC1P7-201ENST00000462417 847 ntBASIC17.24■□□□□ 0.35
BLOC1S4Q9NUP1 ARHGEF26-AS1-201ENST00000467912 628 ntTSL 3 BASIC17.24■□□□□ 0.35
BLOC1S4Q9NUP1 AC138466.1-201ENST00000535242 391 ntTSL 3 BASIC17.24■□□□□ 0.35
BLOC1S4Q9NUP1 FKBP11-208ENST00000550765 1030 ntAPPRIS P3 TSL 1 (best) BASIC17.24■□□□□ 0.35
BLOC1S4Q9NUP1 SDR39U1-212ENST00000555365 976 ntTSL 3 BASIC17.24■□□□□ 0.35
BLOC1S4Q9NUP1 AC090825.1-203ENST00000558188 582 ntTSL 3 BASIC17.24■□□□□ 0.35
BLOC1S4Q9NUP1 LYSMD2-204ENST00000560491 1026 ntTSL 3 BASIC17.24■□□□□ 0.35
Retrieved 100 of 98,524 protein–RNA pairs in 49 ms