Protein–RNA interactions for Protein: Q9NR12

PDLIM7, PDZ and LIM domain protein 7, humanhuman

Predictions only

Length 457 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7Q9NR12 KIFC3-206ENST00000541240 3047 ntTSL 2 BASIC17.25■□□□□ 0.35
PDLIM7Q9NR12 SLC39A14-201ENST00000240095 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
PDLIM7Q9NR12 SPIB-201ENST00000270632 1443 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
PDLIM7Q9NR12 CACNG5-201ENST00000307139 926 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
PDLIM7Q9NR12 AC091046.1-201ENST00000331871 207 ntBASIC17.25■□□□□ 0.35
PDLIM7Q9NR12 YIPF7-201ENST00000332990 937 ntTSL 5 BASIC17.25■□□□□ 0.35
PDLIM7Q9NR12 RAB1A-201ENST00000398529 1198 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
PDLIM7Q9NR12 MB-205ENST00000406324 582 ntAPPRIS P1 TSL 2 BASIC17.25■□□□□ 0.35
PDLIM7Q9NR12 LDHBP1-201ENST00000455730 1119 ntBASIC17.25■□□□□ 0.35
PDLIM7Q9NR12 LYRM4-206ENST00000468929 1168 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
PDLIM7Q9NR12 SEPT7P9-202ENST00000489259 743 ntTSL 3 BASIC17.25■□□□□ 0.35
PDLIM7Q9NR12 CYB561A3-219ENST00000544118 1136 ntTSL 5 BASIC17.25■□□□□ 0.35
PDLIM7Q9NR12 SPAG5-AS1-203ENST00000554154 491 ntTSL 2 BASIC17.25■□□□□ 0.35
PDLIM7Q9NR12 NAT9-222ENST00000583476 583 ntTSL 3 BASIC17.25■□□□□ 0.35
PDLIM7Q9NR12 AC005262.2-201ENST00000587701 452 ntTSL 5 BASIC17.25■□□□□ 0.35
PDLIM7Q9NR12 AC243964.2-201ENST00000590796 829 ntTSL 5 BASIC17.25■□□□□ 0.35
PDLIM7Q9NR12 ANGPTL8-203ENST00000591200 504 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
PDLIM7Q9NR12 CTSA-202ENST00000354880 1820 ntTSL 2 BASIC17.25■□□□□ 0.35
PDLIM7Q9NR12 WARS-232ENST00000556645 2508 ntTSL 5 BASIC17.25■□□□□ 0.35
PDLIM7Q9NR12 PITPNA-202ENST00000539476 3612 ntAPPRIS ALT1 TSL 5 BASIC17.25■□□□□ 0.35
PDLIM7Q9NR12 ZCCHC17-206ENST00000616393 1534 ntTSL 5 BASIC17.25■□□□□ 0.35
PDLIM7Q9NR12 ZNF815P-201ENST00000421890 1352 ntTSL 2 BASIC17.25■□□□□ 0.35
PDLIM7Q9NR12 ZBTB4-202ENST00000380599 5866 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
PDLIM7Q9NR12 HNRNPR-204ENST00000427764 1788 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
PDLIM7Q9NR12 AC008894.3-201ENST00000624324 3103 ntBASIC17.25■□□□□ 0.35
PDLIM7Q9NR12 FAM49B-201ENST00000401979 2024 ntAPPRIS P1 TSL 2 BASIC17.25■□□□□ 0.35
PDLIM7Q9NR12 NRSN2-210ENST00000621012 1852 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
PDLIM7Q9NR12 CNKSR1-202ENST00000374253 2538 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
PDLIM7Q9NR12 TAPBPL-201ENST00000266556 1741 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
PDLIM7Q9NR12 AL365199.1-201ENST00000421320 1714 ntTSL 2 BASIC17.24■□□□□ 0.35
PDLIM7Q9NR12 DENR-201ENST00000280557 2769 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
PDLIM7Q9NR12 DNAJC16-201ENST00000375838 2357 ntTSL 5 BASIC17.24■□□□□ 0.35
PDLIM7Q9NR12 P2RY4-201ENST00000374519 1595 ntAPPRIS P1 BASIC17.24■□□□□ 0.35
PDLIM7Q9NR12 TBC1D26-206ENST00000579428 1583 ntTSL 2 BASIC17.24■□□□□ 0.35
PDLIM7Q9NR12 CDC42EP4-201ENST00000335793 3272 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
PDLIM7Q9NR12 RSPO1-204ENST00000615459 2331 ntTSL 2 BASIC17.24■□□□□ 0.35
PDLIM7Q9NR12 RHNO1-202ENST00000461997 1655 ntAPPRIS ALT2 TSL 2 BASIC17.24■□□□□ 0.35
PDLIM7Q9NR12 ICAM3-201ENST00000160262 1934 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
PDLIM7Q9NR12 POLR1D-212ENST00000630983 1931 ntTSL 5 BASIC17.24■□□□□ 0.35
PDLIM7Q9NR12 GYPC-201ENST00000259254 1246 ntAPPRIS P3 TSL 1 (best) BASIC17.24■□□□□ 0.35
PDLIM7Q9NR12 PDGFB-202ENST00000381551 1125 ntTSL 5 BASIC17.24■□□□□ 0.35
PDLIM7Q9NR12 IGLV4-69-201ENST00000390282 419 ntAPPRIS P1 BASIC17.24■□□□□ 0.35
PDLIM7Q9NR12 IGHV3-21-201ENST00000390607 430 ntAPPRIS P1 BASIC17.24■□□□□ 0.35
PDLIM7Q9NR12 PTPA-218ENST00000435132 618 ntTSL 2 BASIC17.24■□□□□ 0.35
PDLIM7Q9NR12 AC253536.4-201ENST00000440539 267 ntBASIC17.24■□□□□ 0.35
PDLIM7Q9NR12 LINC00642-202ENST00000442515 670 ntTSL 3 BASIC17.24■□□□□ 0.35
PDLIM7Q9NR12 RPS2P36-201ENST00000456516 831 ntBASIC17.24■□□□□ 0.35
PDLIM7Q9NR12 PGAP2-214ENST00000465307 1100 ntTSL 2 BASIC17.24■□□□□ 0.35
PDLIM7Q9NR12 KRT18P25-201ENST00000508931 1278 ntBASIC17.24■□□□□ 0.35
PDLIM7Q9NR12 AL451050.2-201ENST00000606967 682 ntBASIC17.24■□□□□ 0.35
PDLIM7Q9NR12 AP005019.2-201ENST00000615104 511 ntBASIC17.24■□□□□ 0.35
PDLIM7Q9NR12 AC132938.4-201ENST00000623835 848 ntBASIC17.24■□□□□ 0.35
PDLIM7Q9NR12 AC006453.4-201ENST00000636949 1252 ntBASIC17.24■□□□□ 0.35
PDLIM7Q9NR12 AC128714.1-201ENST00000637035 887 ntBASIC17.24■□□□□ 0.35
PDLIM7Q9NR12 TNRC18P3-201ENST00000441896 2691 ntBASIC17.24■□□□□ 0.35
PDLIM7Q9NR12 SIN3B-206ENST00000595541 2767 ntTSL 2 BASIC17.24■□□□□ 0.35
PDLIM7Q9NR12 SHANK2-204ENST00000409530 2123 ntTSL 5 BASIC17.24■□□□□ 0.35
PDLIM7Q9NR12 HSFX2-201ENST00000598963 1365 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
PDLIM7Q9NR12 TMC4-210ENST00000619895 2373 ntAPPRIS P3 TSL 1 (best) BASIC17.24■□□□□ 0.35
PDLIM7Q9NR12 MAP3K8-201ENST00000263056 3096 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
PDLIM7Q9NR12 KRT9-202ENST00000588431 1493 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
PDLIM7Q9NR12 SMARCA4-215ENST00000590574 5282 ntAPPRIS ALT1 TSL 5 BASIC17.24■□□□□ 0.35
PDLIM7Q9NR12 PRAL-201ENST00000624952 3286 ntBASIC17.23■□□□□ 0.35
PDLIM7Q9NR12 C1QTNF2-201ENST00000393975 2414 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
PDLIM7Q9NR12 AC084364.1-201ENST00000551967 1556 ntBASIC17.23■□□□□ 0.35
PDLIM7Q9NR12 BPTF-201ENST00000306378 9688 ntAPPRIS P2 TSL 1 (best) BASIC17.23■□□□□ 0.35
PDLIM7Q9NR12 AC090616.6-203ENST00000579186 1945 ntBASIC17.23■□□□□ 0.35
PDLIM7Q9NR12 LINC00668-206ENST00000581725 1902 ntTSL 2 BASIC17.23■□□□□ 0.35
PDLIM7Q9NR12 AL162311.3-201ENST00000555918 2867 ntTSL 2 BASIC17.23■□□□□ 0.35
PDLIM7Q9NR12 TRIM27-202ENST00000377199 2967 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
PDLIM7Q9NR12 ELP6-201ENST00000296149 1401 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
PDLIM7Q9NR12 MGMT-201ENST00000306010 1759 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
PDLIM7Q9NR12 PRKAR2A-201ENST00000265563 6471 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
PDLIM7Q9NR12 AL139384.1-201ENST00000612143 3047 ntBASIC17.23■□□□□ 0.35
PDLIM7Q9NR12 BMP2K-201ENST00000335016 3804 ntAPPRIS ALT2 TSL 5 BASIC17.23■□□□□ 0.35
PDLIM7Q9NR12 HIST2H2AA3-201ENST00000369159 549 ntAPPRIS P1 BASIC17.23■□□□□ 0.35
PDLIM7Q9NR12 SUN1-204ENST00000403868 978 ntTSL 2 BASIC17.23■□□□□ 0.35
PDLIM7Q9NR12 TMEM243-202ENST00000423734 601 ntTSL 2 BASIC17.23■□□□□ 0.35
PDLIM7Q9NR12 LINC01762-204ENST00000434879 436 ntTSL 2 BASIC17.23■□□□□ 0.35
PDLIM7Q9NR12 TMEM198B-204ENST00000484016 896 ntBASIC17.23■□□□□ 0.35
PDLIM7Q9NR12 IMP3P2-201ENST00000489760 475 ntBASIC17.23■□□□□ 0.35
PDLIM7Q9NR12 RNA5SP486-201ENST00000515961 83 ntBASIC17.23■□□□□ 0.35
PDLIM7Q9NR12 ANAPC15-214ENST00000543587 883 ntAPPRIS ALT1 TSL 1 (best) BASIC17.23■□□□□ 0.35
PDLIM7Q9NR12 DIO3OS-203ENST00000554441 1068 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
PDLIM7Q9NR12 HIRIP3-204ENST00000564026 988 ntTSL 2 BASIC17.23■□□□□ 0.35
PDLIM7Q9NR12 CYBA-208ENST00000567174 1085 ntTSL 2 BASIC17.23■□□□□ 0.35
PDLIM7Q9NR12 TSPO-206ENST00000583777 636 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
PDLIM7Q9NR12 DMAC2-208ENST00000589970 979 ntTSL 2 BASIC17.23■□□□□ 0.35
PDLIM7Q9NR12 FBXL12-212ENST00000592067 879 ntTSL 2 BASIC17.23■□□□□ 0.35
PDLIM7Q9NR12 NDUFV2P1-201ENST00000596415 907 ntBASIC17.23■□□□□ 0.35
PDLIM7Q9NR12 DMAC2-215ENST00000597457 492 ntTSL 5 BASIC17.23■□□□□ 0.35
PDLIM7Q9NR12 SPCS2P2-201ENST00000603270 608 ntBASIC17.23■□□□□ 0.35
PDLIM7Q9NR12 AC025181.2-201ENST00000606994 802 ntBASIC17.23■□□□□ 0.35
PDLIM7Q9NR12 BRPF1-203ENST00000424362 4712 ntAPPRIS ALT1 TSL 1 (best) BASIC17.23■□□□□ 0.35
PDLIM7Q9NR12 PMS1-212ENST00000432292 3234 ntTSL 2 BASIC17.23■□□□□ 0.35
PDLIM7Q9NR12 PMS1-213ENST00000441310 3225 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
PDLIM7Q9NR12 SELENOV-201ENST00000335426 1704 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
PDLIM7Q9NR12 DMAP1-203ENST00000372289 1730 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
PDLIM7Q9NR12 SELENOV-205ENST00000622070 1704 ntTSL 5 BASIC17.23■□□□□ 0.35
PDLIM7Q9NR12 RAPSN-203ENST00000524487 1462 ntTSL 5 BASIC17.23■□□□□ 0.35
Retrieved 100 of 98,524 protein–RNA pairs in 33.3 ms