Protein–RNA interactions for Protein: Q9NP31

SH2D2A, SH2 domain-containing protein 2A, humanhuman

Predictions only

Length 389 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SH2D2AQ9NP31 C19orf24-202ENST00000469144 668 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
SH2D2AQ9NP31 LCN10-203ENST00000474369 564 ntAPPRIS ALT2 TSL 1 (best) BASIC14.09□□□□□ -0.15
SH2D2AQ9NP31 ATG10-207ENST00000513443 978 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
SH2D2AQ9NP31 TROAP-207ENST00000548311 623 ntAPPRIS ALT2 TSL 2 BASIC14.09□□□□□ -0.15
SH2D2AQ9NP31 AL132711.1-201ENST00000557546 722 ntTSL 3 BASIC14.09□□□□□ -0.15
SH2D2AQ9NP31 GCHFR-204ENST00000559445 626 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
SH2D2AQ9NP31 SNAI3-AS1-206ENST00000569786 588 ntTSL 3 BASIC14.09□□□□□ -0.15
SH2D2AQ9NP31 CUEDC1-207ENST00000577840 875 ntTSL 5 BASIC14.09□□□□□ -0.15
SH2D2AQ9NP31 UBE2E3-205ENST00000602475 602 ntTSL 3 BASIC14.09□□□□□ -0.15
SH2D2AQ9NP31 AL022328.1-201ENST00000610050 478 ntBASIC14.09□□□□□ -0.15
SH2D2AQ9NP31 IER3IP1-202ENST00000639845 832 ntTSL 2 BASIC14.09□□□□□ -0.15
SH2D2AQ9NP31 MAP3K9-201ENST00000381250 4025 ntAPPRIS ALT2 TSL 5 BASIC14.09□□□□□ -0.15
SH2D2AQ9NP31 HNF4A-202ENST00000316673 1470 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
SH2D2AQ9NP31 ABCC9-203ENST00000326684 1693 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
SH2D2AQ9NP31 RTN4IP1-201ENST00000369063 1682 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
SH2D2AQ9NP31 C1orf228-219ENST00000535358 1685 ntAPPRIS P2 TSL 5 BASIC14.09□□□□□ -0.15
SH2D2AQ9NP31 MUTYH-206ENST00000372115 1888 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
SH2D2AQ9NP31 MIEF1-202ENST00000402881 2269 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
SH2D2AQ9NP31 GLOD4-203ENST00000536578 2497 ntTSL 5 BASIC14.09□□□□□ -0.15
SH2D2AQ9NP31 PRR18-201ENST00000322583 3084 ntAPPRIS P2 BASIC14.09□□□□□ -0.15
SH2D2AQ9NP31 PROSER1-211ENST00000625998 5102 ntAPPRIS ALT2 TSL 5 BASIC14.09□□□□□ -0.15
SH2D2AQ9NP31 NKIRAS1-201ENST00000388759 2335 ntAPPRIS P2 TSL 3 BASIC14.09□□□□□ -0.15
SH2D2AQ9NP31 SLC47A1-203ENST00000436810 1719 ntTSL 2 BASIC14.09□□□□□ -0.15
SH2D2AQ9NP31 PLIN3-202ENST00000585479 1535 ntAPPRIS ALT1 TSL 1 (best) BASIC14.09□□□□□ -0.15
SH2D2AQ9NP31 HDAC5-201ENST00000225983 5326 ntAPPRIS P3 TSL 5 BASIC14.09□□□□□ -0.15
SH2D2AQ9NP31 MXD4-201ENST00000337190 4056 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
SH2D2AQ9NP31 ADGRA1-203ENST00000607359 6004 ntAPPRIS ALT2 TSL 2 BASIC14.09□□□□□ -0.15
SH2D2AQ9NP31 TBCEL-205ENST00000529397 1375 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
SH2D2AQ9NP31 MAGEA9-201ENST00000243314 1814 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.15
SH2D2AQ9NP31 TSSK2-201ENST00000399635 1816 ntAPPRIS P1 BASIC14.08□□□□□ -0.15
SH2D2AQ9NP31 FAM129B-201ENST00000373312 3957 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.15
SH2D2AQ9NP31 GUCY1B3-206ENST00000507146 2709 ntTSL 1 (best) BASIC14.08□□□□□ -0.15
SH2D2AQ9NP31 LINC00116-201ENST00000414416 2051 ntAPPRIS P5 TSL 1 (best) BASIC14.08□□□□□ -0.15
SH2D2AQ9NP31 SLC25A2-201ENST00000239451 1417 ntAPPRIS P1 BASIC14.08□□□□□ -0.15
SH2D2AQ9NP31 TMEM229B-201ENST00000357461 4068 ntAPPRIS P1 TSL 2 BASIC14.08□□□□□ -0.16
SH2D2AQ9NP31 FAM118B-210ENST00000627851 1862 ntTSL 5 BASIC14.08□□□□□ -0.16
SH2D2AQ9NP31 CXorf38-202ENST00000378421 2380 ntTSL 2 BASIC14.08□□□□□ -0.16
SH2D2AQ9NP31 NCK1-201ENST00000288986 1937 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
SH2D2AQ9NP31 ZSWIM8-AS1-201ENST00000456638 1460 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
SH2D2AQ9NP31 SPATA20-202ENST00000356488 2634 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
SH2D2AQ9NP31 AC008894.3-201ENST00000624324 3103 ntBASIC14.08□□□□□ -0.16
SH2D2AQ9NP31 TEX12-201ENST00000280358 1147 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
SH2D2AQ9NP31 BEX2-202ENST00000372677 899 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
SH2D2AQ9NP31 CD164L2-203ENST00000374030 993 ntAPPRIS ALT1 TSL 5 BASIC14.08□□□□□ -0.16
SH2D2AQ9NP31 UCHL3-201ENST00000377595 844 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
SH2D2AQ9NP31 DSCR3-204ENST00000399001 821 ntTSL 2 BASIC14.08□□□□□ -0.16
SH2D2AQ9NP31 HSPC324-201ENST00000411904 557 ntTSL 2 BASIC14.08□□□□□ -0.16
SH2D2AQ9NP31 NUS1P3-201ENST00000423502 862 ntBASIC14.08□□□□□ -0.16
SH2D2AQ9NP31 PRAP1-201ENST00000433452 971 ntAPPRIS P3 TSL 1 (best) BASIC14.08□□□□□ -0.16
SH2D2AQ9NP31 AC022210.1-201ENST00000449856 793 ntBASIC14.08□□□□□ -0.16
SH2D2AQ9NP31 KRBOX4-206ENST00000478600 730 ntAPPRIS ALT2 TSL 2 BASIC14.08□□□□□ -0.16
SH2D2AQ9NP31 AC004066.1-201ENST00000502488 802 ntBASIC14.08□□□□□ -0.16
SH2D2AQ9NP31 AC012640.1-201ENST00000509915 688 ntTSL 3 BASIC14.08□□□□□ -0.16
SH2D2AQ9NP31 IGHV3-71-201ENST00000523324 359 ntBASIC14.08□□□□□ -0.16
SH2D2AQ9NP31 AC008969.1-205ENST00000553254 876 ntTSL 2 BASIC14.08□□□□□ -0.16
SH2D2AQ9NP31 AL118558.1-202ENST00000557242 451 ntTSL 3 BASIC14.08□□□□□ -0.16
SH2D2AQ9NP31 SLC38A7-207ENST00000564391 731 ntTSL 2 BASIC14.08□□□□□ -0.16
SH2D2AQ9NP31 CMTM3-212ENST00000566121 572 ntTSL 3 BASIC14.08□□□□□ -0.16
SH2D2AQ9NP31 AC133550.2-201ENST00000567731 544 ntTSL 4 BASIC14.08□□□□□ -0.16
SH2D2AQ9NP31 GNRHR2-203ENST00000581100 1187 ntBASIC14.08□□□□□ -0.16
SH2D2AQ9NP31 GADD45B-204ENST00000587345 765 ntTSL 2 BASIC14.08□□□□□ -0.16
SH2D2AQ9NP31 C19orf53-206ENST00000593274 491 ntTSL 2 BASIC14.08□□□□□ -0.16
SH2D2AQ9NP31 HADH-212ENST00000638621 741 ntTSL 5 BASIC14.08□□□□□ -0.16
SH2D2AQ9NP31 NBPF15-202ENST00000488031 4535 ntAPPRIS P1 TSL 5 BASIC14.08□□□□□ -0.16
SH2D2AQ9NP31 TMA16-201ENST00000358572 1978 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
SH2D2AQ9NP31 FAM83G-201ENST00000345041 2929 ntAPPRIS P1 TSL 5 BASIC14.08□□□□□ -0.16
SH2D2AQ9NP31 ARHGEF16-202ENST00000378373 2211 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
SH2D2AQ9NP31 TEKT4-201ENST00000295201 1505 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
SH2D2AQ9NP31 PTPA-203ENST00000348141 2737 ntTSL 5 BASIC14.08□□□□□ -0.16
SH2D2AQ9NP31 PTPA-207ENST00000393370 2737 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
SH2D2AQ9NP31 LSM6-201ENST00000296581 2259 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
SH2D2AQ9NP31 TMED7-TICAM2-201ENST00000282382 3491 ntAPPRIS P1 TSL 2 BASIC14.08□□□□□ -0.16
SH2D2AQ9NP31 RNASE1-202ENST00000397967 1348 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
SH2D2AQ9NP31 HOXB3-205ENST00000470495 4208 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
SH2D2AQ9NP31 CDC42EP4-201ENST00000335793 3272 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
SH2D2AQ9NP31 TTBK1-201ENST00000259750 6932 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
SH2D2AQ9NP31 SLC2A13-202ENST00000380858 3082 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
SH2D2AQ9NP31 TMEM127-202ENST00000432959 3099 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
SH2D2AQ9NP31 MPDU1-201ENST00000250124 1601 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
SH2D2AQ9NP31 TXNDC11-201ENST00000283033 3140 ntAPPRIS P3 TSL 2 BASIC14.08□□□□□ -0.16
SH2D2AQ9NP31 NDRG2-202ENST00000298687 2122 ntAPPRIS P4 TSL 1 (best) BASIC14.08□□□□□ -0.16
SH2D2AQ9NP31 NDRG2-203ENST00000350792 2127 ntAPPRIS ALT1 TSL 1 (best) BASIC14.08□□□□□ -0.16
SH2D2AQ9NP31 RPS9-205ENST00000402367 1617 ntTSL 3 BASIC14.08□□□□□ -0.16
SH2D2AQ9NP31 NHEG1-202ENST00000432330 1357 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
SH2D2AQ9NP31 RUFY2-205ENST00000454950 2613 ntTSL 2 BASIC14.08□□□□□ -0.16
SH2D2AQ9NP31 SYP-207ENST00000479808 1850 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
SH2D2AQ9NP31 ADCY1-204ENST00000621543 1647 ntTSL 5 BASIC14.08□□□□□ -0.16
SH2D2AQ9NP31 RAPSN-201ENST00000298854 1671 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
SH2D2AQ9NP31 PNMA3-202ENST00000593810 1432 ntAPPRIS P1 BASIC14.07□□□□□ -0.16
SH2D2AQ9NP31 TCP1-201ENST00000321394 2499 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
SH2D2AQ9NP31 STK24-203ENST00000397517 4578 ntTSL 2 BASIC14.07□□□□□ -0.16
SH2D2AQ9NP31 CDC25C-207ENST00000513970 1968 ntAPPRIS P1 TSL 2 BASIC14.07□□□□□ -0.16
SH2D2AQ9NP31 DENR-201ENST00000280557 2769 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
SH2D2AQ9NP31 CACFD1-207ENST00000542192 2754 ntTSL 2 BASIC14.07□□□□□ -0.16
SH2D2AQ9NP31 CD209-207ENST00000593660 1497 ntAPPRIS ALT2 TSL 1 (best) BASIC14.07□□□□□ -0.16
SH2D2AQ9NP31 STAT6-225ENST00000640254 2037 ntTSL 5 BASIC14.07□□□□□ -0.16
SH2D2AQ9NP31 TOM1-209ENST00000447733 2317 ntTSL 2 BASIC14.07□□□□□ -0.16
SH2D2AQ9NP31 ING1-203ENST00000375774 2870 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
SH2D2AQ9NP31 ZNF687-201ENST00000324048 5378 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
SH2D2AQ9NP31 IQSEC3-203ENST00000538872 7094 ntAPPRIS ALT2 TSL 5 BASIC14.07□□□□□ -0.16
Retrieved 100 of 98,524 protein–RNA pairs in 52.3 ms