Protein–RNA interactions for Protein: Q9BWH6

RPAP1, RNA polymerase II-associated protein 1, humanhuman

Predicted RBP Predictions only

Length 1,393 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPAP1Q9BWH6 AC112693.3-201ENST00000624819 1983 ntBASIC18.84■□□□□ 0.61
RPAP1Q9BWH6 FBP1-203ENST00000415431 1487 ntAPPRIS P1 TSL 2 BASIC18.84■□□□□ 0.61
RPAP1Q9BWH6 MTA1-203ENST00000406191 2770 ntAPPRIS P5 TSL 2 BASIC18.84■□□□□ 0.61
RPAP1Q9BWH6 NFIC-202ENST00000395111 1755 ntTSL 2 BASIC18.84■□□□□ 0.61
RPAP1Q9BWH6 AL034550.2-201ENST00000620523 1771 ntTSL 2 BASIC18.84■□□□□ 0.61
RPAP1Q9BWH6 MINDY2-202ENST00000450403 4820 ntAPPRIS ALT2 TSL 1 (best) BASIC18.84■□□□□ 0.61
RPAP1Q9BWH6 KIF18B-204ENST00000593135 2745 ntAPPRIS P3 TSL 5 BASIC18.84■□□□□ 0.61
RPAP1Q9BWH6 KIF16B-203ENST00000408042 4640 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
RPAP1Q9BWH6 NCR1-201ENST00000291890 1155 ntAPPRIS P3 TSL 5 BASIC18.84■□□□□ 0.61
RPAP1Q9BWH6 NCR1-202ENST00000338835 973 ntAPPRIS ALT2 TSL 1 (best) BASIC18.84■□□□□ 0.61
RPAP1Q9BWH6 NCR1-203ENST00000350790 739 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
RPAP1Q9BWH6 CCDC107-204ENST00000378409 1173 ntAPPRIS ALT2 TSL 1 (best) BASIC18.84■□□□□ 0.61
RPAP1Q9BWH6 PHACTR1-202ENST00000379329 707 ntTSL 2 BASIC18.84■□□□□ 0.61
RPAP1Q9BWH6 KRTAP10-2-201ENST00000391621 1149 ntAPPRIS P1 BASIC18.84■□□□□ 0.61
RPAP1Q9BWH6 LINC01939-201ENST00000445279 694 ntTSL 5 BASIC18.84■□□□□ 0.61
RPAP1Q9BWH6 C8orf88-201ENST00000517562 894 ntAPPRIS P1 TSL 2 BASIC18.84■□□□□ 0.61
RPAP1Q9BWH6 AC012574.2-201ENST00000520375 443 ntTSL 3 BASIC18.84■□□□□ 0.61
RPAP1Q9BWH6 AC009686.1-201ENST00000522494 364 ntTSL 3 BASIC18.84■□□□□ 0.61
RPAP1Q9BWH6 GNG2-209ENST00000555472 908 ntAPPRIS P1 TSL 3 BASIC18.84■□□□□ 0.61
RPAP1Q9BWH6 BX927359.1-201ENST00000556073 543 ntTSL 2 BASIC18.84■□□□□ 0.61
RPAP1Q9BWH6 GCHFR-206ENST00000561160 572 ntTSL 3 BASIC18.84■□□□□ 0.61
RPAP1Q9BWH6 AP001005.4-201ENST00000572530 387 ntTSL 3 BASIC18.84■□□□□ 0.61
RPAP1Q9BWH6 NFATC3-222ENST00000575270 3824 ntTSL 5 BASIC18.84■□□□□ 0.61
RPAP1Q9BWH6 LINC01663-201ENST00000614596 535 ntTSL 5 BASIC18.84■□□□□ 0.61
RPAP1Q9BWH6 PFAS-212ENST00000625942 396 ntTSL 5 BASIC18.84■□□□□ 0.61
RPAP1Q9BWH6 WIPF3-202ENST00000409123 3491 ntAPPRIS ALT2 TSL 5 BASIC18.84■□□□□ 0.61
RPAP1Q9BWH6 CACNA1B-203ENST00000371355 9647 ntAPPRIS ALT2 TSL 5 BASIC18.84■□□□□ 0.61
RPAP1Q9BWH6 KRT82-201ENST00000257974 2664 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
RPAP1Q9BWH6 GABBR1-205ENST00000377034 4527 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
RPAP1Q9BWH6 TYRO3-201ENST00000263798 8207 ntAPPRIS P3 TSL 1 (best) BASIC18.84■□□□□ 0.61
RPAP1Q9BWH6 CTSB-219ENST00000530640 1389 ntAPPRIS P1 TSL 5 BASIC18.84■□□□□ 0.61
RPAP1Q9BWH6 HSP90B1-201ENST00000299767 2858 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
RPAP1Q9BWH6 FOXH1-201ENST00000377317 2503 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
RPAP1Q9BWH6 SLC29A2-207ENST00000619145 2380 ntTSL 5 BASIC18.84■□□□□ 0.61
RPAP1Q9BWH6 NUAK1-201ENST00000261402 6828 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
RPAP1Q9BWH6 RAPSN-202ENST00000352508 1452 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
RPAP1Q9BWH6 EP300-201ENST00000263253 9587 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
RPAP1Q9BWH6 TMED1-201ENST00000214869 1340 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
RPAP1Q9BWH6 SPTBN4-204ENST00000392025 8671 ntAPPRIS ALT1 TSL 5 BASIC18.84■□□□□ 0.61
RPAP1Q9BWH6 PDZRN3-201ENST00000263666 4248 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
RPAP1Q9BWH6 MAP2K3-202ENST00000342679 2303 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
RPAP1Q9BWH6 ZNF208-205ENST00000601773 2027 ntTSL 2 BASIC18.83■□□□□ 0.61
RPAP1Q9BWH6 SLC35F2-204ENST00000525815 3170 ntAPPRIS P2 TSL 1 (best) BASIC18.83■□□□□ 0.61
RPAP1Q9BWH6 GOLGA2P7-202ENST00000400817 2850 ntTSL 1 (best) BASIC18.83■□□□□ 0.61
RPAP1Q9BWH6 PSMC5-209ENST00000580864 1552 ntTSL 5 BASIC18.83■□□□□ 0.61
RPAP1Q9BWH6 FDPS-202ENST00000368356 1431 ntAPPRIS P3 TSL 2 BASIC18.83■□□□□ 0.61
RPAP1Q9BWH6 FLYWCH1-203ENST00000416288 4963 ntAPPRIS P3 TSL 1 (best) BASIC18.83■□□□□ 0.61
RPAP1Q9BWH6 ADAMTSL1-208ENST00000380570 931 ntTSL 1 (best) BASIC18.83■□□□□ 0.61
RPAP1Q9BWH6 TCP10-202ENST00000397829 2141 ntAPPRIS P2 TSL 1 (best) BASIC18.83■□□□□ 0.61
RPAP1Q9BWH6 SELENOM-202ENST00000402395 1054 ntAPPRIS P2 TSL 1 (best) BASIC18.83■□□□□ 0.61
RPAP1Q9BWH6 AL354761.2-202ENST00000430816 546 ntAPPRIS P1 TSL 5 BASIC18.83■□□□□ 0.61
RPAP1Q9BWH6 KIF9-205ENST00000432493 633 ntTSL 1 (best) BASIC18.83■□□□□ 0.61
RPAP1Q9BWH6 AL121845.2-201ENST00000467211 252 ntAPPRIS P1 TSL 3 BASIC18.83■□□□□ 0.61
RPAP1Q9BWH6 RPL13AP25-201ENST00000484130 612 ntBASIC18.83■□□□□ 0.61
RPAP1Q9BWH6 SPDYE16-201ENST00000515340 858 ntAPPRIS ALT2 TSL 5 BASIC18.83■□□□□ 0.61
RPAP1Q9BWH6 AC068587.3-201ENST00000526613 355 ntBASIC18.83■□□□□ 0.61
RPAP1Q9BWH6 AL359711.2-201ENST00000563105 872 ntBASIC18.83■□□□□ 0.61
RPAP1Q9BWH6 ANKS3-227ENST00000592711 580 ntTSL 4 BASIC18.83■□□□□ 0.61
RPAP1Q9BWH6 AL022328.1-201ENST00000610050 478 ntBASIC18.83■□□□□ 0.61
RPAP1Q9BWH6 AC127383.1-201ENST00000444697 1800 ntBASIC18.83■□□□□ 0.61
RPAP1Q9BWH6 UBAC2-202ENST00000376440 2525 ntTSL 2 BASIC18.83■□□□□ 0.61
RPAP1Q9BWH6 KLK3-202ENST00000360617 1664 ntTSL 1 (best) BASIC18.83■□□□□ 0.61
RPAP1Q9BWH6 CDPF1-204ENST00000404744 1541 ntTSL 3 BASIC18.83■□□□□ 0.61
RPAP1Q9BWH6 SPRY1-207ENST00000610581 2608 ntAPPRIS P1 TSL 3 BASIC18.83■□□□□ 0.61
RPAP1Q9BWH6 FAM160B1-203ENST00000369250 2870 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
RPAP1Q9BWH6 CPSF7-202ENST00000394888 3650 ntAPPRIS P4 TSL 2 BASIC18.83■□□□□ 0.6
RPAP1Q9BWH6 KDM4B-201ENST00000159111 5593 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
RPAP1Q9BWH6 CHRD-201ENST00000204604 3521 ntAPPRIS P3 TSL 1 (best) BASIC18.83■□□□□ 0.6
RPAP1Q9BWH6 GALNT10-203ENST00000425427 4344 ntTSL 2 BASIC18.83■□□□□ 0.6
RPAP1Q9BWH6 SPAG6-201ENST00000313311 2421 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
RPAP1Q9BWH6 LINC01565-201ENST00000356020 2697 ntTSL 2 BASIC18.83■□□□□ 0.6
RPAP1Q9BWH6 ZCCHC18-203ENST00000537356 2907 ntAPPRIS P1 TSL 5 BASIC18.83■□□□□ 0.6
RPAP1Q9BWH6 HDAC8-209ENST00000373589 1740 ntTSL 2 BASIC18.83■□□□□ 0.6
RPAP1Q9BWH6 AC138035.3-201ENST00000622706 2791 ntBASIC18.83■□□□□ 0.6
RPAP1Q9BWH6 FKBP1C-201ENST00000370659 1579 ntAPPRIS P1 BASIC18.83■□□□□ 0.6
RPAP1Q9BWH6 RABGAP1L-201ENST00000251507 2899 ntAPPRIS P1 TSL 2 BASIC18.83■□□□□ 0.6
RPAP1Q9BWH6 SLC26A1-202ENST00000398516 3109 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
RPAP1Q9BWH6 GMPR2-231ENST00000620807 1910 ntTSL 5 BASIC18.82■□□□□ 0.6
RPAP1Q9BWH6 VAPA-201ENST00000340541 1227 ntTSL 5 BASIC18.82■□□□□ 0.6
RPAP1Q9BWH6 LBX2-201ENST00000341396 886 ntTSL 3 BASIC18.82■□□□□ 0.6
RPAP1Q9BWH6 OR5C1-201ENST00000373680 963 ntAPPRIS P1 BASIC18.82■□□□□ 0.6
RPAP1Q9BWH6 TMEM239-202ENST00000380585 571 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
RPAP1Q9BWH6 AC005229.1-201ENST00000392885 409 ntBASIC18.82■□□□□ 0.6
RPAP1Q9BWH6 LINC01759-201ENST00000412639 985 ntTSL 3 BASIC18.82■□□□□ 0.6
RPAP1Q9BWH6 SYNPR-202ENST00000450542 1004 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
RPAP1Q9BWH6 MTX3-202ENST00000512528 1280 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
RPAP1Q9BWH6 SLC25A47P1-201ENST00000531577 414 ntBASIC18.82■□□□□ 0.6
RPAP1Q9BWH6 TAPBPL-205ENST00000544021 772 ntTSL 3 BASIC18.82■□□□□ 0.6
RPAP1Q9BWH6 AC135178.3-201ENST00000583963 531 ntTSL 4 BASIC18.82■□□□□ 0.6
RPAP1Q9BWH6 SNAP25-AS1-208ENST00000605592 556 ntTSL 5 BASIC18.82■□□□□ 0.6
RPAP1Q9BWH6 AC131235.3-202ENST00000608135 362 ntTSL 5 BASIC18.82■□□□□ 0.6
RPAP1Q9BWH6 LINC01759-203ENST00000635271 888 ntTSL 5 BASIC18.82■□□□□ 0.6
RPAP1Q9BWH6 TMEM50A-201ENST00000374358 2683 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
RPAP1Q9BWH6 DMTN-204ENST00000415253 2394 ntTSL 5 BASIC18.82■□□□□ 0.6
RPAP1Q9BWH6 SASH1-201ENST00000367467 7711 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
RPAP1Q9BWH6 ZFP91-201ENST00000316059 5220 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
RPAP1Q9BWH6 PCDHA7-202ENST00000525929 5221 ntAPPRIS P2 TSL 1 (best) BASIC18.82■□□□□ 0.6
RPAP1Q9BWH6 BMP2K-201ENST00000335016 3804 ntAPPRIS ALT2 TSL 5 BASIC18.82■□□□□ 0.6
RPAP1Q9BWH6 NIPAL3-204ENST00000374399 1711 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
RPAP1Q9BWH6 LINC01185-202ENST00000452343 1705 ntTSL 2 BASIC18.82■□□□□ 0.6
Retrieved 100 of 98,524 protein–RNA pairs in 36.5 ms