Protein–RNA interactions for Protein: Q9BQW3

EBF4, Transcription factor COE4, humanhuman

Predictions only

Length 602 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EBF4Q9BQW3 SLC7A4-202ENST00000403586 2307 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
EBF4Q9BQW3 IMPACT-201ENST00000284202 3792 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
EBF4Q9BQW3 TMEM117-207ENST00000551577 2643 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
EBF4Q9BQW3 LSMEM2-201ENST00000316436 1494 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
EBF4Q9BQW3 EHF-210ENST00000531794 1481 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
EBF4Q9BQW3 RCL1-204ENST00000381750 2134 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
EBF4Q9BQW3 MAX-219ENST00000618858 2141 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
EBF4Q9BQW3 AC060234.2-201ENST00000428825 1610 ntTSL 5 BASIC15.22■□□□□ 0.03
EBF4Q9BQW3 FLJ16779-201ENST00000612722 7638 ntBASIC15.22■□□□□ 0.03
EBF4Q9BQW3 GAS2L1-209ENST00000618518 3382 ntAPPRIS P1 TSL 2 BASIC15.22■□□□□ 0.03
EBF4Q9BQW3 ZBTB17-202ENST00000375743 2745 ntAPPRIS P3 TSL 1 (best) BASIC15.22■□□□□ 0.03
EBF4Q9BQW3 VPS9D1-201ENST00000389386 2748 ntAPPRIS P2 TSL 1 (best) BASIC15.22■□□□□ 0.03
EBF4Q9BQW3 CYP4F11-202ENST00000326742 2877 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
EBF4Q9BQW3 RAB3IP-202ENST00000362025 2055 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
EBF4Q9BQW3 KLK8-202ENST00000320838 456 ntTSL 5 BASIC15.22■□□□□ 0.03
EBF4Q9BQW3 CRADD-201ENST00000332896 1169 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
EBF4Q9BQW3 OLFM1-207ENST00000371801 568 ntTSL 2 BASIC15.22■□□□□ 0.03
EBF4Q9BQW3 CHCHD1-201ENST00000372833 835 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
EBF4Q9BQW3 AL031284.1-201ENST00000419297 478 ntBASIC15.22■□□□□ 0.03
EBF4Q9BQW3 AC142381.1-201ENST00000426099 345 ntBASIC15.22■□□□□ 0.03
EBF4Q9BQW3 AL591212.1-201ENST00000433646 615 ntTSL 5 BASIC15.22■□□□□ 0.03
EBF4Q9BQW3 BX890604.1-208ENST00000490920 726 ntTSL 2 BASIC15.22■□□□□ 0.03
EBF4Q9BQW3 AL356056.2-201ENST00000506914 669 ntTSL 4 BASIC15.22■□□□□ 0.03
EBF4Q9BQW3 ATP5G2-204ENST00000549164 745 ntAPPRIS P1 TSL 3 BASIC15.22■□□□□ 0.03
EBF4Q9BQW3 AL138781.1-202ENST00000563018 775 ntTSL 3 BASIC15.22■□□□□ 0.03
EBF4Q9BQW3 RPL19-204ENST00000579260 1051 ntAPPRIS ALT1 TSL 2 BASIC15.22■□□□□ 0.03
EBF4Q9BQW3 FBF1-204ENST00000586631 621 ntAPPRIS ALT2 TSL 2 BASIC15.22■□□□□ 0.03
EBF4Q9BQW3 AC010618.3-201ENST00000596643 775 ntTSL 3 BASIC15.22■□□□□ 0.03
EBF4Q9BQW3 ZSCAN1-203ENST00000601162 813 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
EBF4Q9BQW3 ATP5G2-209ENST00000602871 668 ntAPPRIS P1 TSL 2 BASIC15.22■□□□□ 0.03
EBF4Q9BQW3 GPX4-212ENST00000616066 924 ntAPPRIS ALT1 TSL 5 BASIC15.22■□□□□ 0.03
EBF4Q9BQW3 UGGT2-213ENST00000638479 1010 ntTSL 5 BASIC15.22■□□□□ 0.03
EBF4Q9BQW3 ZBTB7B-207ENST00000535420 3777 ntAPPRIS P3 TSL 5 BASIC15.22■□□□□ 0.03
EBF4Q9BQW3 FBXL4-201ENST00000229971 2810 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
EBF4Q9BQW3 AC004890.2-205ENST00000416232 2804 ntTSL 2 BASIC15.22■□□□□ 0.03
EBF4Q9BQW3 WFIKKN2-202ENST00000426127 2193 ntTSL 2 BASIC15.22■□□□□ 0.03
EBF4Q9BQW3 GPN1-201ENST00000264718 2496 ntAPPRIS P2 TSL 1 (best) BASIC15.22■□□□□ 0.03
EBF4Q9BQW3 TJP1-201ENST00000346128 7950 ntAPPRIS P3 TSL 1 (best) BASIC15.22■□□□□ 0.03
EBF4Q9BQW3 TATDN3-214ENST00000532324 1381 ntTSL 2 BASIC15.22■□□□□ 0.03
EBF4Q9BQW3 SGCE-205ENST00000437425 1508 ntTSL 2 BASIC15.22■□□□□ 0.03
EBF4Q9BQW3 UBE2G1-204ENST00000572484 1514 ntTSL 5 BASIC15.22■□□□□ 0.03
EBF4Q9BQW3 C1orf228-219ENST00000535358 1685 ntAPPRIS P2 TSL 5 BASIC15.22■□□□□ 0.03
EBF4Q9BQW3 C11orf71-202ENST00000623205 1980 ntAPPRIS ALT2 BASIC15.22■□□□□ 0.03
EBF4Q9BQW3 TNXB-208ENST00000611016 6083 ntTSL 5 BASIC15.22■□□□□ 0.03
EBF4Q9BQW3 ICA1-207ENST00000406470 2440 ntAPPRIS P3 TSL 1 (best) BASIC15.22■□□□□ 0.03
EBF4Q9BQW3 ZKSCAN7-201ENST00000273320 3477 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
EBF4Q9BQW3 NR4A3-201ENST00000330847 4982 ntAPPRIS P4 TSL 5 BASIC15.22■□□□□ 0.03
EBF4Q9BQW3 RIMS1-216ENST00000521978 5079 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
EBF4Q9BQW3 SLC38A10-202ENST00000374759 4300 ntAPPRIS ALT2 TSL 5 BASIC15.21■□□□□ 0.03
EBF4Q9BQW3 RASA3-201ENST00000334062 4191 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
EBF4Q9BQW3 CUX1-215ENST00000556210 4044 ntAPPRIS ALT2 TSL 5 BASIC15.21■□□□□ 0.03
EBF4Q9BQW3 AC005523.2-201ENST00000601192 3568 ntTSL 4 BASIC15.21■□□□□ 0.03
EBF4Q9BQW3 GPRC5C-202ENST00000392627 2988 ntAPPRIS P3 TSL 1 (best) BASIC15.21■□□□□ 0.03
EBF4Q9BQW3 SPATS2L-209ENST00000409988 2698 ntAPPRIS P1 TSL 2 BASIC15.21■□□□□ 0.03
EBF4Q9BQW3 PDHX-201ENST00000227868 2389 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
EBF4Q9BQW3 SLC25A18-201ENST00000327451 2244 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
EBF4Q9BQW3 BCL11A-201ENST00000335712 5942 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
EBF4Q9BQW3 SLC25A21-AS1-201ENST00000556667 1924 ntBASIC15.21■□□□□ 0.03
EBF4Q9BQW3 TMED1-201ENST00000214869 1340 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
EBF4Q9BQW3 CLEC16A-202ENST00000409552 3365 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
EBF4Q9BQW3 AC126755.1-201ENST00000525846 6405 ntBASIC15.21■□□□□ 0.03
EBF4Q9BQW3 SEPT7-201ENST00000350320 4350 ntAPPRIS P5 TSL 5 BASIC15.21■□□□□ 0.03
EBF4Q9BQW3 TMTC1-207ENST00000552618 3915 ntTSL 5 BASIC15.21■□□□□ 0.03
EBF4Q9BQW3 AGPAT1-201ENST00000336984 2021 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
EBF4Q9BQW3 E2F6-201ENST00000307236 3317 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
EBF4Q9BQW3 BAG4-201ENST00000287322 4453 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
EBF4Q9BQW3 UBL7-209ENST00000567435 1720 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
EBF4Q9BQW3 DNAJC14-203ENST00000357606 3416 ntAPPRIS P1 TSL 5 BASIC15.21■□□□□ 0.03
EBF4Q9BQW3 LGALS8-203ENST00000341872 2437 ntAPPRIS ALT2 TSL 1 (best) BASIC15.21■□□□□ 0.03
EBF4Q9BQW3 BSCL2-210ENST00000421906 1440 ntAPPRIS P3 TSL 5 BASIC15.21■□□□□ 0.03
EBF4Q9BQW3 LINC01121-201ENST00000378479 1095 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
EBF4Q9BQW3 TMEM44-AS1-203ENST00000453671 1119 ntTSL 2 BASIC15.21■□□□□ 0.03
EBF4Q9BQW3 AP001471.1-201ENST00000454245 672 ntTSL 3 BASIC15.21■□□□□ 0.03
EBF4Q9BQW3 SNCA-209ENST00000506244 570 ntAPPRIS P1 TSL 2 BASIC15.21■□□□□ 0.03
EBF4Q9BQW3 MOK-203ENST00000517966 1230 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
EBF4Q9BQW3 IGHV3-22-201ENST00000520721 359 ntBASIC15.21■□□□□ 0.03
EBF4Q9BQW3 AC087276.3-201ENST00000526220 787 ntTSL 3 BASIC15.21■□□□□ 0.03
EBF4Q9BQW3 MAL2-202ENST00000531508 892 ntTSL 3 BASIC15.21■□□□□ 0.03
EBF4Q9BQW3 AHSA1-202ENST00000535854 1173 ntTSL 2 BASIC15.21■□□□□ 0.03
EBF4Q9BQW3 AP000721.2-201ENST00000537170 650 ntTSL 4 BASIC15.21■□□□□ 0.03
EBF4Q9BQW3 NDUFAB1-205ENST00000570319 885 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
EBF4Q9BQW3 GABARAP-204ENST00000571253 837 ntTSL 2 BASIC15.21■□□□□ 0.03
EBF4Q9BQW3 AP002472.1-201ENST00000577490 586 ntBASIC15.21■□□□□ 0.03
EBF4Q9BQW3 AC068137.2-201ENST00000605408 478 ntBASIC15.21■□□□□ 0.03
EBF4Q9BQW3 AL773604.1-201ENST00000617417 272 ntBASIC15.21■□□□□ 0.03
EBF4Q9BQW3 EVL-201ENST00000392920 1978 ntAPPRIS P3 TSL 1 (best) BASIC15.21■□□□□ 0.03
EBF4Q9BQW3 ZNF587-203ENST00000423137 1974 ntAPPRIS ALT2 TSL 1 (best) BASIC15.21■□□□□ 0.03
EBF4Q9BQW3 CAMK2D-207ENST00000505990 1802 ntTSL 5 BASIC15.21■□□□□ 0.03
EBF4Q9BQW3 AC010327.5-201ENST00000586923 3061 ntBASIC15.21■□□□□ 0.03
EBF4Q9BQW3 ACVR1B-206ENST00000542485 2362 ntTSL 2 BASIC15.21■□□□□ 0.03
EBF4Q9BQW3 MYO15B-237ENST00000642007 4893 ntBASIC15.21■□□□□ 0.03
EBF4Q9BQW3 HSD17B6-203ENST00000554150 1547 ntAPPRIS P1 TSL 5 BASIC15.21■□□□□ 0.03
EBF4Q9BQW3 C19orf57-201ENST00000346736 2489 ntAPPRIS P2 TSL 2 BASIC15.21■□□□□ 0.02
EBF4Q9BQW3 GSTO2-203ENST00000450629 1391 ntTSL 5 BASIC15.21■□□□□ 0.02
EBF4Q9BQW3 EIF5A-206ENST00000571955 1366 ntAPPRIS P1 TSL 5 BASIC15.21■□□□□ 0.02
EBF4Q9BQW3 BNIP3-201ENST00000368636 2861 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
EBF4Q9BQW3 DAB2IP-201ENST00000259371 5469 ntAPPRIS P4 TSL 5 BASIC15.21■□□□□ 0.02
EBF4Q9BQW3 LZTS1-201ENST00000265801 5459 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
EBF4Q9BQW3 MAGIX-208ENST00000616266 3295 ntAPPRIS ALT2 TSL 5 BASIC15.21■□□□□ 0.02
EBF4Q9BQW3 HNRNPUL1-205ENST00000593587 2725 ntTSL 2 BASIC15.21■□□□□ 0.02
Retrieved 100 of 98,524 protein–RNA pairs in 64.3 ms