Protein–RNA interactions for Protein: Q99835

SMO, Smoothened homolog, humanhuman

Predictions only

Length 787 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMOQ99835 SUPT20H-201ENST00000350612 2739 ntAPPRIS ALT2 TSL 1 (best) BASIC16.25■□□□□ 0.19
SMOQ99835 HNF1B-207ENST00000621123 1971 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
SMOQ99835 DARS-AS1-209ENST00000594219 1420 ntTSL 5 BASIC16.25■□□□□ 0.19
SMOQ99835 ACE-202ENST00000290866 4959 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
SMOQ99835 BCAR3-201ENST00000260502 3171 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
SMOQ99835 COBL-201ENST00000265136 5291 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
SMOQ99835 NCKIPSD-201ENST00000294129 2989 ntAPPRIS P3 TSL 1 (best) BASIC16.25■□□□□ 0.19
SMOQ99835 DBN1-202ENST00000309007 2995 ntAPPRIS ALT2 TSL 1 (best) BASIC16.25■□□□□ 0.19
SMOQ99835 SMARCD2-202ENST00000323347 1935 ntTSL 2 BASIC16.25■□□□□ 0.19
SMOQ99835 MEG9-201ENST00000429368 2638 ntTSL 2 BASIC16.25■□□□□ 0.19
SMOQ99835 MEGF6-201ENST00000294599 4501 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
SMOQ99835 CRY2-201ENST00000417225 2053 ntTSL 2 BASIC16.25■□□□□ 0.19
SMOQ99835 DPEP1-202ENST00000393092 1734 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
SMOQ99835 TBP-206ENST00000540980 1701 ntAPPRIS ALT2 TSL 2 BASIC16.25■□□□□ 0.19
SMOQ99835 HAUS2-208ENST00000568876 1702 ntTSL 4 BASIC16.25■□□□□ 0.19
SMOQ99835 AC010424.3-201ENST00000635510 1745 ntTSL 5 BASIC16.25■□□□□ 0.19
SMOQ99835 FDFT1-202ENST00000443614 1393 ntTSL 2 BASIC16.25■□□□□ 0.19
SMOQ99835 ALDOA-201ENST00000338110 2384 ntAPPRIS P2 TSL 1 (best) BASIC16.24■□□□□ 0.19
SMOQ99835 TEKT4-201ENST00000295201 1505 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
SMOQ99835 C18orf15-201ENST00000623680 2534 ntBASIC16.24■□□□□ 0.19
SMOQ99835 VIPR1-217ENST00000543411 2681 ntTSL 2 BASIC16.24■□□□□ 0.19
SMOQ99835 CYTH2-204ENST00000452733 4780 ntAPPRIS P2 TSL 1 (best) BASIC16.24■□□□□ 0.19
SMOQ99835 MEX3C-204ENST00000616921 3269 ntAPPRIS ALT2 TSL 1 (best) BASIC16.24■□□□□ 0.19
SMOQ99835 CACFD1-202ENST00000316948 2794 ntAPPRIS P3 TSL 1 (best) BASIC16.24■□□□□ 0.19
SMOQ99835 RPS9-205ENST00000402367 1617 ntTSL 3 BASIC16.24■□□□□ 0.19
SMOQ99835 PUF60-208ENST00000526683 2412 ntAPPRIS P4 TSL 1 (best) BASIC16.24■□□□□ 0.19
SMOQ99835 ALOX15-205ENST00000574640 2422 ntTSL 2 BASIC16.24■□□□□ 0.19
SMOQ99835 STARD7-201ENST00000337288 3368 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
SMOQ99835 AP001122.1-202ENST00000501648 1916 ntTSL 2 BASIC16.24■□□□□ 0.19
SMOQ99835 HSP90B1-201ENST00000299767 2858 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
SMOQ99835 CXorf40A-201ENST00000359293 974 ntAPPRIS P3 TSL 2 BASIC16.24■□□□□ 0.19
SMOQ99835 S100A16-201ENST00000368703 946 ntAPPRIS P1 TSL 3 BASIC16.24■□□□□ 0.19
SMOQ99835 NDUFA3-203ENST00000391763 338 ntTSL 2 BASIC16.24■□□□□ 0.19
SMOQ99835 AC104457.1-201ENST00000401024 814 ntBASIC16.24■□□□□ 0.19
SMOQ99835 BAATP1-201ENST00000412284 1225 ntBASIC16.24■□□□□ 0.19
SMOQ99835 HOXB-AS1-201ENST00000435312 806 ntTSL 5 BASIC16.24■□□□□ 0.19
SMOQ99835 AC017116.1-201ENST00000445938 708 ntTSL 3 BASIC16.24■□□□□ 0.19
SMOQ99835 AC012441.1-201ENST00000446669 685 ntBASIC16.24■□□□□ 0.19
SMOQ99835 AL391069.3-201ENST00000455503 618 ntTSL 2 BASIC16.24■□□□□ 0.19
SMOQ99835 AC093904.1-201ENST00000474561 455 ntTSL 3 BASIC16.24■□□□□ 0.19
SMOQ99835 AC004066.1-201ENST00000502488 802 ntBASIC16.24■□□□□ 0.19
SMOQ99835 AC022137.2-201ENST00000503482 481 ntBASIC16.24■□□□□ 0.19
SMOQ99835 CCKBR-202ENST00000525014 792 ntTSL 4 BASIC16.24■□□□□ 0.19
SMOQ99835 ZFPL1-207ENST00000526791 384 ntTSL 3 BASIC16.24■□□□□ 0.19
SMOQ99835 KRT17P8-201ENST00000540749 863 ntBASIC16.24■□□□□ 0.19
SMOQ99835 AC106886.1-201ENST00000568660 600 ntBASIC16.24■□□□□ 0.19
SMOQ99835 PIGL-212ENST00000581006 554 ntTSL 4 BASIC16.24■□□□□ 0.19
SMOQ99835 RAB29-201ENST00000235932 1723 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
SMOQ99835 STMN1-203ENST00000399728 1712 ntAPPRIS P1 TSL 2 BASIC16.24■□□□□ 0.19
SMOQ99835 TOM1L1-201ENST00000348161 1895 ntTSL 2 BASIC16.24■□□□□ 0.19
SMOQ99835 BRD2-201ENST00000374825 4894 ntAPPRIS P3 TSL 1 (best) BASIC16.24■□□□□ 0.19
SMOQ99835 UNC13A-206ENST00000552293 5314 ntAPPRIS ALT2 TSL 5 BASIC16.24■□□□□ 0.19
SMOQ99835 CEACAM19-202ENST00000403660 1982 ntAPPRIS P3 TSL 1 (best) BASIC16.24■□□□□ 0.19
SMOQ99835 LINC00116-201ENST00000414416 2051 ntAPPRIS P5 TSL 1 (best) BASIC16.23■□□□□ 0.19
SMOQ99835 NCK1-201ENST00000288986 1937 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
SMOQ99835 CHRFAM7A-203ENST00000401522 1913 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
SMOQ99835 IQCE-217ENST00000623361 6775 ntAPPRIS ALT2 TSL 1 (best) BASIC16.23■□□□□ 0.19
SMOQ99835 RNASE1-202ENST00000397967 1348 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
SMOQ99835 AC134312.5-201ENST00000568031 1313 ntBASIC16.23■□□□□ 0.19
SMOQ99835 AC007182.1-201ENST00000455232 2159 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
SMOQ99835 STXBP5-207ENST00000546097 2160 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
SMOQ99835 LINC00996-201ENST00000477392 2043 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
SMOQ99835 GLMP-214ENST00000614643 1851 ntAPPRIS ALT2 TSL 2 BASIC16.23■□□□□ 0.19
SMOQ99835 STAT1-202ENST00000392322 2716 ntAPPRIS ALT1 TSL 1 (best) BASIC16.23■□□□□ 0.19
SMOQ99835 AC023024.1-201ENST00000558838 2590 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
SMOQ99835 UNC119B-201ENST00000344651 4404 ntAPPRIS P1 TSL 2 BASIC16.23■□□□□ 0.19
SMOQ99835 IRX6-201ENST00000290552 3128 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
SMOQ99835 PLPPR4-203ENST00000457765 4846 ntTSL 2 BASIC16.23■□□□□ 0.19
SMOQ99835 NAT8-201ENST00000272425 947 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
SMOQ99835 SCGN-201ENST00000334979 704 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
SMOQ99835 BEX3-203ENST00000372635 805 ntAPPRIS P1 TSL 2 BASIC16.23■□□□□ 0.19
SMOQ99835 FKBP1B-201ENST00000380986 952 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
SMOQ99835 DHDDS-206ENST00000427245 868 ntTSL 5 BASIC16.23■□□□□ 0.19
SMOQ99835 RPL28-203ENST00000428193 573 ntTSL 2 BASIC16.23■□□□□ 0.19
SMOQ99835 RPL28-204ENST00000431533 590 ntTSL 2 BASIC16.23■□□□□ 0.19
SMOQ99835 AC004522.2-201ENST00000456499 680 ntTSL 3 BASIC16.23■□□□□ 0.19
SMOQ99835 RPL28-207ENST00000558815 616 ntTSL 2 BASIC16.23■□□□□ 0.19
SMOQ99835 SNAI3-AS1-206ENST00000569786 588 ntTSL 3 BASIC16.23■□□□□ 0.19
SMOQ99835 SAMD11P1-201ENST00000571429 661 ntBASIC16.23■□□□□ 0.19
SMOQ99835 AP001005.4-201ENST00000572530 387 ntTSL 3 BASIC16.23■□□□□ 0.19
SMOQ99835 SNHG15-207ENST00000582727 1039 ntTSL 2 BASIC16.23■□□□□ 0.19
SMOQ99835 INO80C-210ENST00000590757 595 ntTSL 2 BASIC16.23■□□□□ 0.19
SMOQ99835 AC233724.13-201ENST00000598383 410 ntBASIC16.23■□□□□ 0.19
SMOQ99835 AP4B1-204ENST00000369569 2818 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
SMOQ99835 WRAP73-202ENST00000378322 1998 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
SMOQ99835 EIF4G1-204ENST00000352767 5484 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
SMOQ99835 ZNF568-203ENST00000427117 1827 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
SMOQ99835 MAST3-201ENST00000262811 5896 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
SMOQ99835 ABCC9-203ENST00000326684 1693 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
SMOQ99835 SLC9A2-201ENST00000233969 5410 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
SMOQ99835 CNOT8-202ENST00000403027 2604 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
SMOQ99835 IL9R-201ENST00000244174 1944 ntAPPRIS P3 TSL 1 (best) BASIC16.23■□□□□ 0.19
SMOQ99835 ASCL1-201ENST00000266744 2472 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
SMOQ99835 BRAP-201ENST00000327551 1947 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
SMOQ99835 TBCEL-205ENST00000529397 1375 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
SMOQ99835 AC018665.1-201ENST00000622927 1362 ntBASIC16.23■□□□□ 0.19
SMOQ99835 LSS-205ENST00000457828 4390 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
SMOQ99835 KIAA1755-206ENST00000496900 2557 ntAPPRIS ALT2 TSL 2 BASIC16.23■□□□□ 0.19
SMOQ99835 NEU3-206ENST00000532963 1643 ntTSL 2 BASIC16.23■□□□□ 0.19
SMOQ99835 CD209-207ENST00000593660 1497 ntAPPRIS ALT2 TSL 1 (best) BASIC16.22■□□□□ 0.19
Retrieved 100 of 98,524 protein–RNA pairs in 60.9 ms