Protein–RNA interactions for Protein: Q96RY5

CRAMP1, Protein cramped-like, humanhuman

Predictions only

Length 1,269 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CRAMP1Q96RY5 LINC01006-204ENST00000435354 545 ntTSL 2 BASIC18.76■□□□□ 0.59
CRAMP1Q96RY5 AC011742.3-201ENST00000439053 820 ntBASIC18.76■□□□□ 0.59
CRAMP1Q96RY5 MSRA-203ENST00000441698 788 ntTSL 2 BASIC18.76■□□□□ 0.59
CRAMP1Q96RY5 LINC02028-203ENST00000443776 453 ntTSL 3 BASIC18.76■□□□□ 0.59
CRAMP1Q96RY5 AL157935.2-201ENST00000476274 1071 ntTSL 5 BASIC18.76■□□□□ 0.59
CRAMP1Q96RY5 AC024681.1-201ENST00000521917 487 ntBASIC18.76■□□□□ 0.59
CRAMP1Q96RY5 AC134698.3-201ENST00000523880 214 ntBASIC18.76■□□□□ 0.59
CRAMP1Q96RY5 AP007216.2-201ENST00000562094 299 ntTSL 3 BASIC18.76■□□□□ 0.59
CRAMP1Q96RY5 AC013355.1-201ENST00000562625 723 ntBASIC18.76■□□□□ 0.59
CRAMP1Q96RY5 SMIM24-203ENST00000587847 820 ntAPPRIS ALT2 TSL 1 (best) BASIC18.76■□□□□ 0.59
CRAMP1Q96RY5 AC026740.1-201ENST00000607068 791 ntBASIC18.76■□□□□ 0.59
CRAMP1Q96RY5 SIRT2-219ENST00000613542 1170 ntTSL 5 BASIC18.76■□□□□ 0.59
CRAMP1Q96RY5 LINC01672-205ENST00000635092 633 ntTSL 5 BASIC18.76■□□□□ 0.59
CRAMP1Q96RY5 AC004923.1-202ENST00000642106 209 ntBASIC18.76■□□□□ 0.59
CRAMP1Q96RY5 SELPLG-201ENST00000228463 1704 ntAPPRIS ALT2 TSL 2 BASIC18.76■□□□□ 0.59
CRAMP1Q96RY5 SUZ12-201ENST00000322652 4491 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
CRAMP1Q96RY5 STAT5A-207ENST00000546010 3086 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
CRAMP1Q96RY5 HCG18-233ENST00000412685 2552 ntTSL 2 BASIC18.76■□□□□ 0.59
CRAMP1Q96RY5 TRIL-201ENST00000539664 4935 ntAPPRIS P1 BASIC18.76■□□□□ 0.59
CRAMP1Q96RY5 MYCN-202ENST00000638417 1693 ntTSL 2 BASIC18.76■□□□□ 0.59
CRAMP1Q96RY5 EIF1B-AS1-201ENST00000625390 1958 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
CRAMP1Q96RY5 ACOT7-203ENST00000377845 1432 ntAPPRIS ALT2 TSL 1 (best) BASIC18.75■□□□□ 0.59
CRAMP1Q96RY5 PRKCSH-205ENST00000587327 2189 ntAPPRIS ALT2 TSL 2 BASIC18.75■□□□□ 0.59
CRAMP1Q96RY5 PITPNC1-201ENST00000299954 6359 ntAPPRIS ALT2 TSL 5 BASIC18.75■□□□□ 0.59
CRAMP1Q96RY5 MAX-201ENST00000246163 897 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
CRAMP1Q96RY5 C9orf24-201ENST00000297623 1151 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
CRAMP1Q96RY5 SPAG11A-203ENST00000351436 534 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
CRAMP1Q96RY5 SPAG11B-204ENST00000361111 534 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
CRAMP1Q96RY5 MRPL55-214ENST00000366741 603 ntAPPRIS P1 TSL 2 BASIC18.75■□□□□ 0.59
CRAMP1Q96RY5 MRPL55-218ENST00000366747 603 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
CRAMP1Q96RY5 NPPA-201ENST00000376476 728 ntTSL 3 BASIC18.75■□□□□ 0.59
CRAMP1Q96RY5 C9orf24-205ENST00000379133 712 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
CRAMP1Q96RY5 CSH2-203ENST00000392886 920 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
CRAMP1Q96RY5 LINC01118-202ENST00000409912 1023 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
CRAMP1Q96RY5 LINC01352-201ENST00000431347 962 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
CRAMP1Q96RY5 RNMTL1P1-201ENST00000454103 560 ntBASIC18.75■□□□□ 0.59
CRAMP1Q96RY5 RPS2P36-201ENST00000456516 831 ntBASIC18.75■□□□□ 0.59
CRAMP1Q96RY5 TUBB8P8-201ENST00000458717 1058 ntBASIC18.75■□□□□ 0.59
CRAMP1Q96RY5 AC106794.1-201ENST00000506935 792 ntBASIC18.75■□□□□ 0.59
CRAMP1Q96RY5 AC239802.2-201ENST00000532137 554 ntTSL 4 BASIC18.75■□□□□ 0.59
CRAMP1Q96RY5 AC005865.1-202ENST00000543036 641 ntTSL 2 BASIC18.75■□□□□ 0.59
CRAMP1Q96RY5 AC106738.2-201ENST00000559802 557 ntTSL 4 BASIC18.75■□□□□ 0.59
CRAMP1Q96RY5 CSH2-206ENST00000560142 749 ntTSL 5 BASIC18.75■□□□□ 0.59
CRAMP1Q96RY5 FGFR3P5-201ENST00000564496 886 ntBASIC18.75■□□□□ 0.59
CRAMP1Q96RY5 AC108134.4-201ENST00000570700 302 ntTSL 3 BASIC18.75■□□□□ 0.59
CRAMP1Q96RY5 GLIS2-AS1-201ENST00000576080 340 ntTSL 2 BASIC18.75■□□□□ 0.59
CRAMP1Q96RY5 CRHR1-208ENST00000577353 1206 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
CRAMP1Q96RY5 MIR3907-201ENST00000579424 151 ntBASIC18.75■□□□□ 0.59
CRAMP1Q96RY5 RN7SL163P-201ENST00000583100 276 ntBASIC18.75■□□□□ 0.59
CRAMP1Q96RY5 LGALS9C-215ENST00000584941 1104 ntTSL 5 BASIC18.75■□□□□ 0.59
CRAMP1Q96RY5 AC005324.6-201ENST00000587972 613 ntBASIC18.75■□□□□ 0.59
CRAMP1Q96RY5 Metazoa_SRP.69-201ENST00000615730 281 ntBASIC18.75■□□□□ 0.59
CRAMP1Q96RY5 AC068790.8-201ENST00000618862 504 ntAPPRIS P1 TSL 3 BASIC18.75■□□□□ 0.59
CRAMP1Q96RY5 HS1BP3-203ENST00000406618 1375 ntTSL 2 BASIC18.75■□□□□ 0.59
CRAMP1Q96RY5 SART1-201ENST00000312397 3293 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
CRAMP1Q96RY5 RSBN1-205ENST00000615321 2418 ntTSL 2 BASIC18.75■□□□□ 0.59
CRAMP1Q96RY5 SGSM2-202ENST00000426855 4734 ntAPPRIS ALT1 TSL 1 (best) BASIC18.75■□□□□ 0.59
CRAMP1Q96RY5 TCEAL4-209ENST00000472745 1571 ntAPPRIS P3 TSL 5 BASIC18.75■□□□□ 0.59
CRAMP1Q96RY5 QKI-205ENST00000392127 7911 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
CRAMP1Q96RY5 GOLGA8H-201ENST00000566740 1899 ntAPPRIS P1 TSL 5 BASIC18.75■□□□□ 0.59
CRAMP1Q96RY5 GOLGA8J-201ENST00000567927 1899 ntAPPRIS P1 TSL 5 BASIC18.75■□□□□ 0.59
CRAMP1Q96RY5 ZNF84-208ENST00000539354 3237 ntAPPRIS P2 TSL 1 (best) BASIC18.75■□□□□ 0.59
CRAMP1Q96RY5 RRBP1-208ENST00000470422 2070 ntTSL 2 BASIC18.75■□□□□ 0.59
CRAMP1Q96RY5 SEPT11-206ENST00000505788 2079 ntAPPRIS ALT1 TSL 5 BASIC18.75■□□□□ 0.59
CRAMP1Q96RY5 PRPF31-203ENST00000419967 2269 ntTSL 5 BASIC18.75■□□□□ 0.59
CRAMP1Q96RY5 TOM1-204ENST00000411850 2390 ntAPPRIS ALT1 TSL 1 (best) BASIC18.75■□□□□ 0.59
CRAMP1Q96RY5 ADAMTSL5-201ENST00000330475 2857 ntAPPRIS P1 TSL 2 BASIC18.75■□□□□ 0.59
CRAMP1Q96RY5 CARNS1-202ENST00000445895 3971 ntAPPRIS P1 TSL 5 BASIC18.74■□□□□ 0.59
CRAMP1Q96RY5 IGHA2-202ENST00000497872 1320 ntAPPRIS P5 TSL 1 (best) BASIC18.74■□□□□ 0.59
CRAMP1Q96RY5 SAP130-202ENST00000259235 4065 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
CRAMP1Q96RY5 ACTR2-205ENST00000542850 1429 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
CRAMP1Q96RY5 TUBA3D-201ENST00000321253 1546 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
CRAMP1Q96RY5 TBP-202ENST00000392092 1903 ntAPPRIS P3 TSL 1 (best) BASIC18.74■□□□□ 0.59
CRAMP1Q96RY5 ARHGEF25-208ENST00000616622 2103 ntTSL 2 BASIC18.74■□□□□ 0.59
CRAMP1Q96RY5 ASAP3-212ENST00000618240 2226 ntTSL 5 BASIC18.74■□□□□ 0.59
CRAMP1Q96RY5 DCHS2-201ENST00000339452 5064 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
CRAMP1Q96RY5 PICALM-219ENST00000532317 3474 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
CRAMP1Q96RY5 ABHD3-201ENST00000289119 2064 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
CRAMP1Q96RY5 KRT32-201ENST00000225899 1750 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
CRAMP1Q96RY5 DNAJC19-201ENST00000382564 1453 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
CRAMP1Q96RY5 COL9A1-204ENST00000370496 1372 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
CRAMP1Q96RY5 RAB40AL-201ENST00000218249 1029 ntAPPRIS P1 BASIC18.74■□□□□ 0.59
CRAMP1Q96RY5 THOC6-201ENST00000253952 1246 ntTSL 2 BASIC18.74■□□□□ 0.59
CRAMP1Q96RY5 CD8B-204ENST00000393759 1096 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
CRAMP1Q96RY5 OSM-202ENST00000403389 1000 ntAPPRIS ALT2 TSL 3 BASIC18.74■□□□□ 0.59
CRAMP1Q96RY5 TPT1-AS1-203ENST00000412946 744 ntTSL 3 BASIC18.74■□□□□ 0.59
CRAMP1Q96RY5 EID1-202ENST00000560490 584 ntTSL 3 BASIC18.74■□□□□ 0.59
CRAMP1Q96RY5 MIR4783-201ENST00000580343 82 ntBASIC18.74■□□□□ 0.59
CRAMP1Q96RY5 C1QTNF1-AS1-202ENST00000581579 865 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
CRAMP1Q96RY5 SPCS2P2-201ENST00000603270 608 ntBASIC18.74■□□□□ 0.59
CRAMP1Q96RY5 C20orf141-202ENST00000603872 580 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
CRAMP1Q96RY5 AC079336.7-201ENST00000623428 1078 ntBASIC18.74■□□□□ 0.59
CRAMP1Q96RY5 SCPEP1-201ENST00000262288 1942 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
CRAMP1Q96RY5 AATK-201ENST00000326724 5257 ntAPPRIS P3 TSL 5 BASIC18.74■□□□□ 0.59
CRAMP1Q96RY5 SELENOV-201ENST00000335426 1704 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
CRAMP1Q96RY5 COQ8A-201ENST00000366777 2872 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
CRAMP1Q96RY5 RCHY1-202ENST00000380840 1735 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
CRAMP1Q96RY5 GHRLOS-201ENST00000439539 1708 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
CRAMP1Q96RY5 SELENOV-205ENST00000622070 1704 ntTSL 5 BASIC18.74■□□□□ 0.59
CRAMP1Q96RY5 SUMO1-203ENST00000392246 1536 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Retrieved 100 of 98,524 protein–RNA pairs in 36.1 ms