Protein–RNA interactions for Protein: Q96P44

COL21A1, Collagen alpha-1(XXI) chain, humanhuman

Predictions only

Length 957 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL21A1Q96P44 MBOAT2-201ENST00000305997 7751 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
COL21A1Q96P44 ETV5-206ENST00000434744 2213 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
COL21A1Q96P44 COG3-201ENST00000349995 4498 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
COL21A1Q96P44 GDAP1L1-201ENST00000342560 2265 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
COL21A1Q96P44 KRT85-201ENST00000257901 2447 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
COL21A1Q96P44 PCK2-203ENST00000545054 2505 ntTSL 2 BASIC14.8□□□□□ -0.04
COL21A1Q96P44 PRSS55-201ENST00000328655 1124 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
COL21A1Q96P44 NKAIN2-201ENST00000368416 1106 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
COL21A1Q96P44 ZUFSP-201ENST00000368573 1225 ntTSL 5 BASIC14.8□□□□□ -0.04
COL21A1Q96P44 ASMT-201ENST00000381229 1087 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
COL21A1Q96P44 GPR162-202ENST00000382315 1150 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
COL21A1Q96P44 HLA-DRB6-201ENST00000411500 1235 ntBASIC14.8□□□□□ -0.04
COL21A1Q96P44 IQCF3-201ENST00000437810 1270 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
COL21A1Q96P44 AC091729.1-201ENST00000449721 869 ntTSL 3 BASIC14.8□□□□□ -0.04
COL21A1Q96P44 C3orf67-212ENST00000491845 832 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
COL21A1Q96P44 SATB1-217ENST00000493952 626 ntTSL 3 BASIC14.8□□□□□ -0.04
COL21A1Q96P44 MIR4313-201ENST00000580760 101 ntBASIC14.8□□□□□ -0.04
COL21A1Q96P44 AL589739.1-201ENST00000607720 493 ntBASIC14.8□□□□□ -0.04
COL21A1Q96P44 AL133215.2-201ENST00000609242 977 ntBASIC14.8□□□□□ -0.04
COL21A1Q96P44 ZSCAN10-209ENST00000576985 2739 ntAPPRIS P1 TSL 5 BASIC14.8□□□□□ -0.04
COL21A1Q96P44 CASC3-201ENST00000264645 4116 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
COL21A1Q96P44 WDR61-201ENST00000267973 1387 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
COL21A1Q96P44 SCLT1-204ENST00000503215 1364 ntAPPRIS ALT2 TSL 1 (best) BASIC14.8□□□□□ -0.04
COL21A1Q96P44 IRF9-203ENST00000557894 1391 ntTSL 5 BASIC14.8□□□□□ -0.04
COL21A1Q96P44 ANKRD2-203ENST00000370655 1451 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
COL21A1Q96P44 MAPKAPK5-207ENST00000551404 1630 ntAPPRIS P4 TSL 5 BASIC14.8□□□□□ -0.04
COL21A1Q96P44 MARCH2-208ENST00000602117 1667 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
COL21A1Q96P44 SNRPD3-201ENST00000215829 1763 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
COL21A1Q96P44 FAM219A-206ENST00000379087 3573 ntAPPRIS ALT1 TSL 4 BASIC14.8□□□□□ -0.04
COL21A1Q96P44 FLAD1-205ENST00000368431 1803 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
COL21A1Q96P44 NFE2-203ENST00000540264 1833 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
COL21A1Q96P44 FBXO45-202ENST00000440469 3689 ntTSL 2 BASIC14.8□□□□□ -0.04
COL21A1Q96P44 STEAP3-202ENST00000393107 1871 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
COL21A1Q96P44 KNSTRN-202ENST00000416151 1899 ntTSL 3 BASIC14.8□□□□□ -0.04
COL21A1Q96P44 NID1-201ENST00000264187 5864 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
COL21A1Q96P44 TNFSF13-202ENST00000349228 2036 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
COL21A1Q96P44 TSC22D3-201ENST00000315660 2213 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
COL21A1Q96P44 ASAH1-210ENST00000520781 2245 ntTSL 2 BASIC14.8□□□□□ -0.04
COL21A1Q96P44 NCK2-203ENST00000393349 2371 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
COL21A1Q96P44 ABCB8-221ENST00000498578 2350 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
COL21A1Q96P44 SIGLEC11-202ENST00000426971 2479 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
COL21A1Q96P44 EML4-201ENST00000318522 5549 ntAPPRIS P3 TSL 1 (best) BASIC14.79□□□□□ -0.04
COL21A1Q96P44 RNF135-202ENST00000328381 2892 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
COL21A1Q96P44 RHPN1-201ENST00000289013 3683 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
COL21A1Q96P44 SLC41A1-201ENST00000367137 4997 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
COL21A1Q96P44 RIMS1-216ENST00000521978 5079 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
COL21A1Q96P44 ABHD11-201ENST00000222800 1483 ntAPPRIS P3 TSL 1 (best) BASIC14.79□□□□□ -0.04
COL21A1Q96P44 MAST1-201ENST00000251472 4833 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
COL21A1Q96P44 PAM16-201ENST00000318059 587 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
COL21A1Q96P44 TOB2-201ENST00000327492 4561 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
COL21A1Q96P44 KREMEN1-201ENST00000327813 2719 ntAPPRIS P3 TSL 2 BASIC14.79□□□□□ -0.04
COL21A1Q96P44 HIST2H3D-201ENST00000331491 411 ntAPPRIS P1 BASIC14.79□□□□□ -0.04
COL21A1Q96P44 CPT2-201ENST00000371486 3094 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
COL21A1Q96P44 HIST2H3PS2-201ENST00000392948 411 ntAPPRIS P1 BASIC14.79□□□□□ -0.04
COL21A1Q96P44 HFE-208ENST00000397022 1280 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
COL21A1Q96P44 CAMKMT-204ENST00000407131 652 ntTSL 3 BASIC14.79□□□□□ -0.04
COL21A1Q96P44 HFE-214ENST00000488199 781 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
COL21A1Q96P44 ZNF789-211ENST00000493485 556 ntTSL 4 BASIC14.79□□□□□ -0.04
COL21A1Q96P44 UBE2V2-201ENST00000517630 612 ntTSL 4 BASIC14.79□□□□□ -0.04
COL21A1Q96P44 RAB1B-202ENST00000527397 991 ntTSL 3 BASIC14.79□□□□□ -0.04
COL21A1Q96P44 MFSD4A-207ENST00000536357 1841 ntTSL 2 BASIC14.79□□□□□ -0.04
COL21A1Q96P44 COMMD4-207ENST00000562789 746 ntTSL 2 BASIC14.79□□□□□ -0.04
COL21A1Q96P44 ACSM2B-207ENST00000565232 2322 ntAPPRIS P1 TSL 2 BASIC14.79□□□□□ -0.04
COL21A1Q96P44 ZBTB7C-204ENST00000586438 4899 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
COL21A1Q96P44 STAT5A-211ENST00000590949 3318 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
COL21A1Q96P44 TK2-221ENST00000620035 5060 ntTSL 2 BASIC14.79□□□□□ -0.04
COL21A1Q96P44 GMPR2-231ENST00000620807 1910 ntTSL 5 BASIC14.79□□□□□ -0.04
COL21A1Q96P44 SELENOH-206ENST00000622257 1291 ntAPPRIS ALT1 TSL 5 BASIC14.79□□□□□ -0.04
COL21A1Q96P44 LINC01101-201ENST00000622953 1884 ntBASIC14.79□□□□□ -0.04
COL21A1Q96P44 ATP6AP2-226ENST00000637526 1862 ntAPPRIS ALT2 TSL 5 BASIC14.79□□□□□ -0.04
COL21A1Q96P44 DLGAP2-215ENST00000637795 3380 ntTSL 5 BASIC14.79□□□□□ -0.04
COL21A1Q96P44 ITGB4-206ENST00000579662 5554 ntAPPRIS ALT2 TSL 1 (best) BASIC14.79□□□□□ -0.04
COL21A1Q96P44 ELOA-204ENST00000613537 4924 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
COL21A1Q96P44 MYO15B-237ENST00000642007 4893 ntBASIC14.79□□□□□ -0.04
COL21A1Q96P44 CHTF18-205ENST00000455171 3172 ntAPPRIS ALT2 TSL 2 BASIC14.79□□□□□ -0.04
COL21A1Q96P44 PIK3R1-211ENST00000521381 7011 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
COL21A1Q96P44 MGME1-203ENST00000377710 2336 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
COL21A1Q96P44 NKIRAS1-201ENST00000388759 2335 ntAPPRIS P2 TSL 3 BASIC14.78□□□□□ -0.04
COL21A1Q96P44 TAF6-209ENST00000452041 2297 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
COL21A1Q96P44 AC068580.4-201ENST00000636615 2228 ntAPPRIS ALT2 TSL 5 BASIC14.78□□□□□ -0.04
COL21A1Q96P44 FAM215B-201ENST00000458392 2183 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
COL21A1Q96P44 B4GALNT3-201ENST00000266383 5068 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
COL21A1Q96P44 EOMES-201ENST00000295743 3386 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
COL21A1Q96P44 KRT8-215ENST00000552150 1687 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
COL21A1Q96P44 BICDL1-201ENST00000397558 3055 ntAPPRIS P1 TSL 5 BASIC14.78□□□□□ -0.04
COL21A1Q96P44 SLC8B1-201ENST00000202831 2975 ntAPPRIS P1 TSL 5 BASIC14.78□□□□□ -0.04
COL21A1Q96P44 HACD3-206ENST00000565299 1465 ntTSL 5 BASIC14.78□□□□□ -0.04
COL21A1Q96P44 NOP14-201ENST00000314262 2889 ntAPPRIS P3 TSL 1 (best) BASIC14.78□□□□□ -0.04
COL21A1Q96P44 NACC2-201ENST00000277554 6899 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
COL21A1Q96P44 IL11RA-215ENST00000602473 1388 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
COL21A1Q96P44 PRDM6-201ENST00000407847 9267 ntAPPRIS P1 TSL 5 BASIC14.78□□□□□ -0.04
COL21A1Q96P44 ZFPM2-206ENST00000520492 3960 ntTSL 2 BASIC14.78□□□□□ -0.04
COL21A1Q96P44 C4A-259ENST00000498271 5269 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
COL21A1Q96P44 NISCH-202ENST00000420808 2589 ntAPPRIS ALT2 TSL 5 BASIC14.78□□□□□ -0.04
COL21A1Q96P44 NBL1-201ENST00000289749 731 ntAPPRIS ALT2 TSL 2 BASIC14.78□□□□□ -0.04
COL21A1Q96P44 LINC00313-201ENST00000332440 579 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
COL21A1Q96P44 S100A14-204ENST00000368702 1218 ntAPPRIS P1 TSL 3 BASIC14.78□□□□□ -0.04
COL21A1Q96P44 WLS-203ENST00000370971 700 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
COL21A1Q96P44 AL121753.1-201ENST00000444717 529 ntAPPRIS P1 TSL 3 BASIC14.78□□□□□ -0.04
COL21A1Q96P44 S100A14-206ENST00000476873 1025 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Retrieved 100 of 98,524 protein–RNA pairs in 38.2 ms