Protein–RNA interactions for Protein: Q96L96

ALPK3, Alpha-protein kinase 3, humanhuman

Predictions only

Length 1,907 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ALPK3Q96L96 UBE2Q2-201ENST00000267938 3130 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
ALPK3Q96L96 UBE4B-203ENST00000377153 1273 ntTSL 3 BASIC16.52■□□□□ 0.23
ALPK3Q96L96 AC091564.6-201ENST00000526633 487 ntTSL 3 BASIC16.52■□□□□ 0.23
ALPK3Q96L96 AF111169.4-201ENST00000556368 749 ntTSL 2 BASIC16.52■□□□□ 0.23
ALPK3Q96L96 LINC01224-201ENST00000593573 798 ntTSL 4 BASIC16.52■□□□□ 0.23
ALPK3Q96L96 ATG5-210ENST00000636437 2261 ntTSL 5 BASIC16.52■□□□□ 0.23
ALPK3Q96L96 HASPIN-201ENST00000325418 2797 ntAPPRIS P1 BASIC16.52■□□□□ 0.23
ALPK3Q96L96 PPP1R13B-201ENST00000202556 4958 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
ALPK3Q96L96 COL9A1-201ENST00000320755 3059 ntTSL 1 (best) BASIC16.52■□□□□ 0.23
ALPK3Q96L96 ATP6AP2-213ENST00000636251 1877 ntAPPRIS ALT2 TSL 5 BASIC16.52■□□□□ 0.23
ALPK3Q96L96 CEP128-201ENST00000216517 1606 ntTSL 1 (best) BASIC16.52■□□□□ 0.23
ALPK3Q96L96 CHIA-204ENST00000369740 1625 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
ALPK3Q96L96 RBCK1-202ENST00000356286 2774 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
ALPK3Q96L96 RBPJL-201ENST00000343694 2489 ntAPPRIS P3 TSL 1 (best) BASIC16.51■□□□□ 0.23
ALPK3Q96L96 SH2D3C-205ENST00000420366 2682 ntTSL 2 BASIC16.51■□□□□ 0.23
ALPK3Q96L96 MAP2K6-205ENST00000589647 1512 ntTSL 5 BASIC16.51■□□□□ 0.23
ALPK3Q96L96 TPD52L1-213ENST00000534000 2356 ntAPPRIS P3 TSL 1 (best) BASIC16.51■□□□□ 0.23
ALPK3Q96L96 CD300A-204ENST00000392625 1163 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
ALPK3Q96L96 CNRIP1-202ENST00000409559 644 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
ALPK3Q96L96 AC005392.1-201ENST00000419624 500 ntTSL 5 BASIC16.51■□□□□ 0.23
ALPK3Q96L96 AC096649.1-201ENST00000449168 497 ntTSL 3 BASIC16.51■□□□□ 0.23
ALPK3Q96L96 AC012507.1-201ENST00000454890 600 ntTSL 4 BASIC16.51■□□□□ 0.23
ALPK3Q96L96 APOPT1-209ENST00000492189 513 ntTSL 3 BASIC16.51■□□□□ 0.23
ALPK3Q96L96 LINC00634-202ENST00000505157 222 ntBASIC16.51■□□□□ 0.23
ALPK3Q96L96 AC090735.1-201ENST00000523881 488 ntTSL 4 BASIC16.51■□□□□ 0.23
ALPK3Q96L96 C8orf31-207ENST00000524181 1199 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
ALPK3Q96L96 AC012158.2-201ENST00000536546 354 ntBASIC16.51■□□□□ 0.23
ALPK3Q96L96 PRB3-202ENST00000538488 1283 ntAPPRIS P5 TSL 5 BASIC16.51■□□□□ 0.23
ALPK3Q96L96 MAX-211ENST00000555667 574 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
ALPK3Q96L96 MYOZ3-209ENST00000615557 1031 ntTSL 2 BASIC16.51■□□□□ 0.23
ALPK3Q96L96 ROPN1-211ENST00000620893 1006 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
ALPK3Q96L96 AC138466.5-201ENST00000624002 808 ntBASIC16.51■□□□□ 0.23
ALPK3Q96L96 IGFBP3-203ENST00000381086 2322 ntTSL 2 BASIC16.51■□□□□ 0.23
ALPK3Q96L96 PLD4-201ENST00000392593 6515 ntAPPRIS P3 TSL 1 (best) BASIC16.51■□□□□ 0.23
ALPK3Q96L96 MSI2-204ENST00000442934 1624 ntTSL 2 BASIC16.51■□□□□ 0.23
ALPK3Q96L96 TMPRSS4-211ENST00000522307 1634 ntTSL 2 BASIC16.51■□□□□ 0.23
ALPK3Q96L96 MANSC1-201ENST00000396349 2220 ntTSL 2 BASIC16.51■□□□□ 0.23
ALPK3Q96L96 GLIS1-201ENST00000312233 2812 ntAPPRIS P2 TSL 2 BASIC16.51■□□□□ 0.23
ALPK3Q96L96 ZBTB45-201ENST00000354590 2352 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
ALPK3Q96L96 SLC25A46-201ENST00000355943 2385 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
ALPK3Q96L96 SPATA21-205ENST00000540400 1773 ntAPPRIS ALT2 TSL 1 (best) BASIC16.51■□□□□ 0.23
ALPK3Q96L96 CRY2-211ENST00000616080 1936 ntAPPRIS ALT2 TSL 1 (best) BASIC16.51■□□□□ 0.23
ALPK3Q96L96 AC018695.7-201ENST00000624587 2492 ntBASIC16.51■□□□□ 0.23
ALPK3Q96L96 AC006449.6-201ENST00000612330 2296 ntBASIC16.51■□□□□ 0.23
ALPK3Q96L96 RELL1-201ENST00000314117 1326 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
ALPK3Q96L96 TRPM2-AS-202ENST00000456880 2056 ntTSL 2 BASIC16.51■□□□□ 0.23
ALPK3Q96L96 AC133785.1-201ENST00000429282 2824 ntTSL 2 BASIC16.51■□□□□ 0.23
ALPK3Q96L96 SIGLEC6-205ENST00000425629 1852 ntAPPRIS P4 TSL 2 BASIC16.51■□□□□ 0.23
ALPK3Q96L96 YAP1-210ENST00000615667 5398 ntAPPRIS ALT2 TSL 5 BASIC16.51■□□□□ 0.23
ALPK3Q96L96 CYP4B1-202ENST00000371919 1494 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
ALPK3Q96L96 CRB3-201ENST00000308243 631 ntAPPRIS ALT2 TSL 2 BASIC16.51■□□□□ 0.23
ALPK3Q96L96 ETV2-201ENST00000379023 926 ntAPPRIS ALT2 TSL 1 (best) BASIC16.51■□□□□ 0.23
ALPK3Q96L96 RPS9-204ENST00000391753 709 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
ALPK3Q96L96 PCBP3-201ENST00000400304 1086 ntAPPRIS ALT2 TSL 1 (best) BASIC16.51■□□□□ 0.23
ALPK3Q96L96 IGF1-205ENST00000424202 612 ntAPPRIS ALT1 TSL 1 (best) BASIC16.51■□□□□ 0.23
ALPK3Q96L96 AC114763.1-201ENST00000431985 928 ntTSL 2 BASIC16.51■□□□□ 0.23
ALPK3Q96L96 PCBP3-208ENST00000449640 1278 ntAPPRIS ALT2 TSL 5 BASIC16.51■□□□□ 0.23
ALPK3Q96L96 AC105219.2-201ENST00000527908 299 ntTSL 4 BASIC16.51■□□□□ 0.23
ALPK3Q96L96 NME1-NME2-203ENST00000555572 1193 ntAPPRIS ALT2 TSL 2 BASIC16.51■□□□□ 0.23
ALPK3Q96L96 AC010335.1-201ENST00000594590 599 ntTSL 3 BASIC16.51■□□□□ 0.23
ALPK3Q96L96 CTNNAL1-204ENST00000374595 2522 ntAPPRIS ALT2 TSL 1 (best) BASIC16.51■□□□□ 0.23
ALPK3Q96L96 APOPT1-201ENST00000409074 2523 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
ALPK3Q96L96 KLHL24-201ENST00000242810 2345 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
ALPK3Q96L96 LRP5-201ENST00000294304 5159 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
ALPK3Q96L96 YARS2-201ENST00000324868 2122 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
ALPK3Q96L96 ANKMY1-202ENST00000361678 2499 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
ALPK3Q96L96 TTLL10-202ENST00000379289 2259 ntAPPRIS P1 TSL 2 BASIC16.5■□□□□ 0.23
ALPK3Q96L96 C12orf66-204ENST00000544871 2441 ntTSL 2 BASIC16.5■□□□□ 0.23
ALPK3Q96L96 DYNC1LI2-203ENST00000443351 1502 ntTSL 2 BASIC16.5■□□□□ 0.23
ALPK3Q96L96 NFATC4-218ENST00000554966 2506 ntAPPRIS ALT2 TSL 1 (best) BASIC16.5■□□□□ 0.23
ALPK3Q96L96 NFATC4-225ENST00000556169 2509 ntAPPRIS ALT2 TSL 1 (best) BASIC16.5■□□□□ 0.23
ALPK3Q96L96 KCNQ2-207ENST00000370224 3004 ntTSL 5 BASIC16.5■□□□□ 0.23
ALPK3Q96L96 SCAF11-203ENST00000395453 1336 ntAPPRIS ALT2 TSL 2 BASIC16.5■□□□□ 0.23
ALPK3Q96L96 MIB2-201ENST00000355826 3290 ntAPPRIS ALT2 TSL 1 (best) BASIC16.5■□□□□ 0.23
ALPK3Q96L96 CHRNG-202ENST00000389494 2262 ntAPPRIS P1 TSL 5 BASIC16.5■□□□□ 0.23
ALPK3Q96L96 PSMB4-201ENST00000290541 964 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
ALPK3Q96L96 FABP5P3-202ENST00000477993 1027 ntTSL 5 BASIC16.5■□□□□ 0.23
ALPK3Q96L96 HTATIP2-205ENST00000530266 713 ntTSL 3 BASIC16.5■□□□□ 0.23
ALPK3Q96L96 CR383656.3-201ENST00000551315 183 ntBASIC16.5■□□□□ 0.23
ALPK3Q96L96 SLC25A21-203ENST00000555449 1023 ntAPPRIS ALT1 TSL 2 BASIC16.5■□□□□ 0.23
ALPK3Q96L96 EXOSC5-204ENST00000596905 826 ntTSL 2 BASIC16.5■□□□□ 0.23
ALPK3Q96L96 AC004706.3-207ENST00000634823 977 ntTSL 5 BASIC16.5■□□□□ 0.23
ALPK3Q96L96 LINC00431-202ENST00000636375 159 ntBASIC16.5■□□□□ 0.23
ALPK3Q96L96 Z84468.1-201ENST00000626321 1408 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
ALPK3Q96L96 KIF1BP-214ENST00000638119 2537 ntTSL 5 BASIC16.5■□□□□ 0.23
ALPK3Q96L96 AL079303.2-201ENST00000555107 2613 ntTSL 3 BASIC16.5■□□□□ 0.23
ALPK3Q96L96 SLCO2B1-205ENST00000525650 2121 ntTSL 2 BASIC16.5■□□□□ 0.23
ALPK3Q96L96 PRSS36-207ENST00000569305 2723 ntAPPRIS ALT2 TSL 1 (best) BASIC16.5■□□□□ 0.23
ALPK3Q96L96 DGKQ-201ENST00000273814 4636 ntAPPRIS P2 TSL 1 (best) BASIC16.5■□□□□ 0.23
ALPK3Q96L96 MYO1C-203ENST00000438665 4898 ntAPPRIS ALT1 TSL 5 BASIC16.49■□□□□ 0.23
ALPK3Q96L96 KRT18P9-201ENST00000604826 1300 ntBASIC16.49■□□□□ 0.23
ALPK3Q96L96 NMD3-202ENST00000460469 3061 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
ALPK3Q96L96 NPFF-201ENST00000267017 592 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
ALPK3Q96L96 AC239868.1-201ENST00000369385 493 ntBASIC16.49■□□□□ 0.23
ALPK3Q96L96 THAP4-202ENST00000402136 785 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
ALPK3Q96L96 HCG27-204ENST00000424675 895 ntTSL 3 BASIC16.49■□□□□ 0.23
ALPK3Q96L96 AL731661.1-201ENST00000438217 758 ntTSL 5 BASIC16.49■□□□□ 0.23
ALPK3Q96L96 AC061961.1-201ENST00000443901 432 ntTSL 3 BASIC16.49■□□□□ 0.23
ALPK3Q96L96 PUDPP3-201ENST00000445368 636 ntBASIC16.49■□□□□ 0.23
ALPK3Q96L96 HIST2H2BB-202ENST00000609585 563 ntTSL 2 BASIC16.49■□□□□ 0.23
Retrieved 100 of 98,524 protein–RNA pairs in 37.4 ms