Protein–RNA interactions for Protein: Q8WVI0

SMIM4, Small integral membrane protein 4, humanhuman

Predictions only

Length 70 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMIM4Q8WVI0 HPSE-207ENST00000513463 1458 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
SMIM4Q8WVI0 GPN3-202ENST00000537466 1491 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
SMIM4Q8WVI0 LINC02167-203ENST00000566900 1489 ntTSL 2 BASIC13.36□□□□□ -0.27
SMIM4Q8WVI0 KCTD10-208ENST00000540089 3096 ntTSL 2 BASIC13.36□□□□□ -0.27
SMIM4Q8WVI0 PFKFB4-201ENST00000232375 3586 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
SMIM4Q8WVI0 GGT5-202ENST00000327365 2494 ntAPPRIS P3 TSL 1 (best) BASIC13.36□□□□□ -0.27
SMIM4Q8WVI0 DNAJC27-201ENST00000264711 4992 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
SMIM4Q8WVI0 COPS3-201ENST00000268717 1641 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
SMIM4Q8WVI0 SNX14-203ENST00000369627 3111 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
SMIM4Q8WVI0 SYT15-201ENST00000374321 1369 ntAPPRIS P4 TSL 2 BASIC13.36□□□□□ -0.27
SMIM4Q8WVI0 LRRFIP1-204ENST00000392000 3365 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
SMIM4Q8WVI0 MAGED4B-202ENST00000360134 2510 ntAPPRIS ALT2 TSL 1 (best) BASIC13.36□□□□□ -0.27
SMIM4Q8WVI0 MST1P2-201ENST00000457982 2291 ntBASIC13.36□□□□□ -0.27
SMIM4Q8WVI0 CDK16-211ENST00000518022 2022 ntAPPRIS P1 TSL 2 BASIC13.36□□□□□ -0.27
SMIM4Q8WVI0 SIDT1-201ENST00000264852 5080 ntAPPRIS P1 TSL 2 BASIC13.36□□□□□ -0.27
SMIM4Q8WVI0 KCNMA1-262ENST00000639489 4302 ntAPPRIS ALT2 TSL 5 BASIC13.36□□□□□ -0.27
SMIM4Q8WVI0 DHDH-201ENST00000221403 1081 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
SMIM4Q8WVI0 PDLIM7-205ENST00000393551 1226 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
SMIM4Q8WVI0 IFT27-205ENST00000433985 1095 ntAPPRIS ALT1 TSL 1 (best) BASIC13.36□□□□□ -0.27
SMIM4Q8WVI0 CXCL1P1-201ENST00000502804 216 ntBASIC13.36□□□□□ -0.27
SMIM4Q8WVI0 REEP2-206ENST00000506158 1021 ntTSL 2 BASIC13.36□□□□□ -0.27
SMIM4Q8WVI0 PRYP6-201ENST00000514804 343 ntBASIC13.36□□□□□ -0.27
SMIM4Q8WVI0 NPM2-204ENST00000518119 1190 ntAPPRIS P2 TSL 1 (best) BASIC13.36□□□□□ -0.27
SMIM4Q8WVI0 FCHSD1-204ENST00000519800 802 ntTSL 2 BASIC13.36□□□□□ -0.27
SMIM4Q8WVI0 OVCA2-201ENST00000572195 1122 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
SMIM4Q8WVI0 HOXB8-203ENST00000576562 743 ntAPPRIS ALT1 TSL 2 BASIC13.36□□□□□ -0.27
SMIM4Q8WVI0 PNMT-203ENST00000581428 677 ntTSL 2 BASIC13.36□□□□□ -0.27
SMIM4Q8WVI0 AQP4-AS1-204ENST00000582605 525 ntTSL 4 BASIC13.36□□□□□ -0.27
SMIM4Q8WVI0 AL009183.1-201ENST00000603760 355 ntBASIC13.36□□□□□ -0.27
SMIM4Q8WVI0 AC008608.2-201ENST00000606089 416 ntBASIC13.36□□□□□ -0.27
SMIM4Q8WVI0 LINC01128-210ENST00000609139 455 ntTSL 3 BASIC13.36□□□□□ -0.27
SMIM4Q8WVI0 SPACA6-213ENST00000637797 1073 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
SMIM4Q8WVI0 ADORA1-209ENST00000640524 653 ntTSL 5 BASIC13.36□□□□□ -0.27
SMIM4Q8WVI0 GLIS2-201ENST00000262366 4469 ntAPPRIS P1 TSL 2 BASIC13.36□□□□□ -0.27
SMIM4Q8WVI0 AHCYL2-202ENST00000446544 5026 ntAPPRIS ALT1 TSL 1 (best) BASIC13.36□□□□□ -0.27
SMIM4Q8WVI0 TOX3-201ENST00000219746 3233 ntAPPRIS P4 TSL 2 BASIC13.36□□□□□ -0.27
SMIM4Q8WVI0 YTHDF3-216ENST00000623280 5193 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
SMIM4Q8WVI0 UNKL-202ENST00000301712 1431 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
SMIM4Q8WVI0 PPP1R27-202ENST00000570394 1443 ntTSL 2 BASIC13.36□□□□□ -0.27
SMIM4Q8WVI0 INF2-203ENST00000392634 4672 ntAPPRIS P3 TSL 5 BASIC13.36□□□□□ -0.27
SMIM4Q8WVI0 CPA5-202ENST00000431780 1803 ntTSL 2 BASIC13.36□□□□□ -0.27
SMIM4Q8WVI0 OR10AC1-201ENST00000439431 2898 ntAPPRIS P1 BASIC13.36□□□□□ -0.27
SMIM4Q8WVI0 PAPSS2-201ENST00000361175 3949 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
SMIM4Q8WVI0 FUK-201ENST00000288078 4081 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
SMIM4Q8WVI0 GPR37-201ENST00000303921 3021 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
SMIM4Q8WVI0 OSMR-201ENST00000274276 5539 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
SMIM4Q8WVI0 A1CF-202ENST00000373993 1997 ntAPPRIS P4 TSL 1 (best) BASIC13.36□□□□□ -0.27
SMIM4Q8WVI0 FGR-202ENST00000374004 2350 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
SMIM4Q8WVI0 TAP2-201ENST00000374897 5684 ntAPPRIS P2 TSL 1 (best) BASIC13.36□□□□□ -0.27
SMIM4Q8WVI0 EIF1B-AS1-206ENST00000631175 1303 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
SMIM4Q8WVI0 STMN1-203ENST00000399728 1712 ntAPPRIS P1 TSL 2 BASIC13.36□□□□□ -0.27
SMIM4Q8WVI0 AKNA-206ENST00000374088 5464 ntAPPRIS P2 TSL 2 BASIC13.36□□□□□ -0.27
SMIM4Q8WVI0 SLC29A1-204ENST00000371731 2258 ntAPPRIS P1 TSL 5 BASIC13.36□□□□□ -0.27
SMIM4Q8WVI0 PLCG1-AS1-201ENST00000454626 1462 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
SMIM4Q8WVI0 CDT1-201ENST00000301019 3240 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
SMIM4Q8WVI0 SHMT2-202ENST00000414700 2006 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
SMIM4Q8WVI0 DPP9-210ENST00000597849 2025 ntTSL 5 BASIC13.35□□□□□ -0.27
SMIM4Q8WVI0 SLC20A2-208ENST00000520262 2992 ntAPPRIS P1 TSL 2 BASIC13.35□□□□□ -0.27
SMIM4Q8WVI0 KCP-206ENST00000613019 4853 ntAPPRIS P5 TSL 5 BASIC13.35□□□□□ -0.27
SMIM4Q8WVI0 NF2-205ENST00000361452 5884 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
SMIM4Q8WVI0 MPP6-201ENST00000222644 8452 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
SMIM4Q8WVI0 CYTH3-201ENST00000350796 4505 ntAPPRIS P2 TSL 1 (best) BASIC13.35□□□□□ -0.27
SMIM4Q8WVI0 CYTH3-202ENST00000396741 4508 ntAPPRIS ALT1 TSL 5 BASIC13.35□□□□□ -0.27
SMIM4Q8WVI0 GOLM1-203ENST00000388712 3046 ntAPPRIS P2 TSL 1 (best) BASIC13.35□□□□□ -0.27
SMIM4Q8WVI0 IRF9-203ENST00000557894 1391 ntTSL 5 BASIC13.35□□□□□ -0.27
SMIM4Q8WVI0 PRKD1-202ENST00000415220 3189 ntAPPRIS ALT2 TSL 5 BASIC13.35□□□□□ -0.27
SMIM4Q8WVI0 GLIPR1L2-204ENST00000550916 2609 ntAPPRIS ALT2 TSL 1 (best) BASIC13.35□□□□□ -0.27
SMIM4Q8WVI0 SEPT11-206ENST00000505788 2079 ntAPPRIS ALT1 TSL 5 BASIC13.35□□□□□ -0.27
SMIM4Q8WVI0 ZNF70-201ENST00000341976 6924 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
SMIM4Q8WVI0 BAIAP3-216ENST00000628027 4732 ntTSL 5 BASIC13.35□□□□□ -0.27
SMIM4Q8WVI0 RAB5C-201ENST00000346213 1671 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
SMIM4Q8WVI0 XPNPEP1-218ENST00000502935 2539 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
SMIM4Q8WVI0 ENO2-211ENST00000541477 2549 ntAPPRIS P1 TSL 2 BASIC13.35□□□□□ -0.27
SMIM4Q8WVI0 MAPK4-201ENST00000400384 4770 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
SMIM4Q8WVI0 CHIC2-201ENST00000263921 1194 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
SMIM4Q8WVI0 PRR29-203ENST00000425164 1266 ntTSL 2 BASIC13.35□□□□□ -0.27
SMIM4Q8WVI0 GHSR-202ENST00000427970 912 ntBASIC13.35□□□□□ -0.27
SMIM4Q8WVI0 HILS1-201ENST00000504307 1219 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
SMIM4Q8WVI0 AC100810.1-201ENST00000518822 978 ntTSL 2 BASIC13.35□□□□□ -0.27
SMIM4Q8WVI0 REXO2-206ENST00000539275 710 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
SMIM4Q8WVI0 AC021087.4-201ENST00000563761 564 ntBASIC13.35□□□□□ -0.27
SMIM4Q8WVI0 AC126696.3-202ENST00000570159 553 ntTSL 5 BASIC13.35□□□□□ -0.27
SMIM4Q8WVI0 AP000845.1-201ENST00000581677 2131 ntBASIC13.35□□□□□ -0.27
SMIM4Q8WVI0 AC064853.6-201ENST00000642029 303 ntAPPRIS P1 BASIC13.35□□□□□ -0.27
SMIM4Q8WVI0 CEP170B-204ENST00000556508 6683 ntTSL 5 BASIC13.35□□□□□ -0.27
SMIM4Q8WVI0 SPIB-201ENST00000270632 1443 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
SMIM4Q8WVI0 IRF3-202ENST00000377135 1442 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
SMIM4Q8WVI0 TEX264-209ENST00000457573 1448 ntAPPRIS P3 TSL 5 BASIC13.35□□□□□ -0.27
SMIM4Q8WVI0 ANP32A-203ENST00000465139 2440 ntAPPRIS P2 TSL 1 (best) BASIC13.35□□□□□ -0.27
SMIM4Q8WVI0 PIK3R1-211ENST00000521381 7011 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
SMIM4Q8WVI0 MLLT10-201ENST00000307729 5032 ntAPPRIS ALT2 TSL 1 (best) BASIC13.35□□□□□ -0.27
SMIM4Q8WVI0 FLII-201ENST00000327031 4338 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
SMIM4Q8WVI0 TGFB1I1-203ENST00000394863 1898 ntAPPRIS ALT1 TSL 1 (best) BASIC13.35□□□□□ -0.27
SMIM4Q8WVI0 INTS11-204ENST00000421495 1868 ntTSL 2 BASIC13.35□□□□□ -0.27
SMIM4Q8WVI0 PITRM1-206ENST00000451104 3183 ntTSL 2 BASIC13.35□□□□□ -0.27
SMIM4Q8WVI0 TMPRSS9-201ENST00000332578 3331 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
SMIM4Q8WVI0 IBA57-201ENST00000366711 7817 ntAPPRIS P1 TSL 2 BASIC13.35□□□□□ -0.27
SMIM4Q8WVI0 CTXND1-201ENST00000560778 6890 ntAPPRIS P1 TSL 3 BASIC13.35□□□□□ -0.27
SMIM4Q8WVI0 MAP3K1-201ENST00000399503 7011 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
SMIM4Q8WVI0 RIC1-201ENST00000251879 4127 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
Retrieved 100 of 98,524 protein–RNA pairs in 54.7 ms