Protein–RNA interactions for Protein: Q8TCU4

ALMS1, Alstrom syndrome protein 1, humanhuman

Predictions only

Length 4,167 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ALMS1Q8TCU4 MLLT10-216ENST00000621220 381 ntTSL 1 (best) BASIC10.19□□□□□ -0.78
ALMS1Q8TCU4 PTPN6-204ENST00000456013 2389 ntTSL 1 (best) BASIC10.19□□□□□ -0.78
ALMS1Q8TCU4 AIFM3-203ENST00000405089 2333 ntAPPRIS ALT1 TSL 2 BASIC10.19□□□□□ -0.78
ALMS1Q8TCU4 MTA2-204ENST00000527204 2265 ntTSL 2 BASIC10.19□□□□□ -0.78
ALMS1Q8TCU4 DTX2-201ENST00000324432 2769 ntAPPRIS P3 TSL 1 (best) BASIC10.19□□□□□ -0.78
ALMS1Q8TCU4 RNF32-202ENST00000317955 1682 ntAPPRIS P1 TSL 1 (best) BASIC10.19□□□□□ -0.78
ALMS1Q8TCU4 PITX2-205ENST00000394598 1906 ntAPPRIS ALT1 TSL 1 (best) BASIC10.19□□□□□ -0.78
ALMS1Q8TCU4 CACNA1H-201ENST00000348261 8208 ntAPPRIS P4 TSL 1 (best) BASIC10.19□□□□□ -0.78
ALMS1Q8TCU4 FMR1-208ENST00000440235 4271 ntTSL 1 (best) BASIC10.19□□□□□ -0.78
ALMS1Q8TCU4 ETFA-203ENST00000557943 2287 ntAPPRIS P1 TSL 1 (best) BASIC10.19□□□□□ -0.78
ALMS1Q8TCU4 CAAP1-206ENST00000625311 1532 ntTSL 2 BASIC10.18□□□□□ -0.78
ALMS1Q8TCU4 AL731661.1-201ENST00000438217 758 ntTSL 5 BASIC10.18□□□□□ -0.78
ALMS1Q8TCU4 DNM1P51-201ENST00000558149 522 ntBASIC10.18□□□□□ -0.78
ALMS1Q8TCU4 GPSM3-207ENST00000375043 1456 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
ALMS1Q8TCU4 KRT8P31-201ENST00000504812 1408 ntBASIC10.18□□□□□ -0.78
ALMS1Q8TCU4 GLRB-201ENST00000264428 3126 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
ALMS1Q8TCU4 EIF4A1-201ENST00000293831 1756 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
ALMS1Q8TCU4 LUC7L3-201ENST00000240304 1972 ntAPPRIS P1 TSL 2 BASIC10.18□□□□□ -0.78
ALMS1Q8TCU4 RBCK1-202ENST00000356286 2774 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
ALMS1Q8TCU4 ELAC2-203ENST00000426905 2671 ntTSL 2 BASIC10.18□□□□□ -0.78
ALMS1Q8TCU4 RAN-212ENST00000543796 2661 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
ALMS1Q8TCU4 ATP6AP2-213ENST00000636251 1877 ntAPPRIS ALT2 TSL 5 BASIC10.18□□□□□ -0.78
ALMS1Q8TCU4 AL645933.1-201ENST00000440087 609 ntBASIC10.18□□□□□ -0.78
ALMS1Q8TCU4 ALG1L6P-201ENST00000515248 758 ntBASIC10.18□□□□□ -0.78
ALMS1Q8TCU4 AL049833.2-202ENST00000556773 626 ntTSL 3 BASIC10.18□□□□□ -0.78
ALMS1Q8TCU4 AC010335.1-201ENST00000594590 599 ntTSL 3 BASIC10.18□□□□□ -0.78
ALMS1Q8TCU4 TMIGD2-204ENST00000600349 333 ntAPPRIS ALT2 TSL 1 (best) BASIC10.18□□□□□ -0.78
ALMS1Q8TCU4 AC009145.4-201ENST00000625119 1294 ntBASIC10.18□□□□□ -0.78
ALMS1Q8TCU4 MEPCE-201ENST00000310512 3030 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
ALMS1Q8TCU4 DLX4-202ENST00000411890 1404 ntTSL 1 (best) BASIC10.18□□□□□ -0.78
ALMS1Q8TCU4 FKBP6-204ENST00000431982 1446 ntAPPRIS ALT2 TSL 2 BASIC10.18□□□□□ -0.78
ALMS1Q8TCU4 DENND5B-201ENST00000354285 3132 ntTSL 1 (best) BASIC10.18□□□□□ -0.78
ALMS1Q8TCU4 CHST8-201ENST00000262622 2479 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
ALMS1Q8TCU4 KDM1A-201ENST00000356634 3033 ntAPPRIS P3 TSL 1 (best) BASIC10.18□□□□□ -0.78
ALMS1Q8TCU4 PCNA-202ENST00000379160 1359 ntAPPRIS P1 TSL 5 BASIC10.18□□□□□ -0.78
ALMS1Q8TCU4 ARL6IP6-201ENST00000326446 2805 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
ALMS1Q8TCU4 ETV4-211ENST00000591713 1727 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
ALMS1Q8TCU4 DBNDD1-202ENST00000304733 2081 ntTSL 1 (best) BASIC10.18□□□□□ -0.78
ALMS1Q8TCU4 ADAM8-205ENST00000485491 2441 ntTSL 2 BASIC10.18□□□□□ -0.78
ALMS1Q8TCU4 CCNE1-203ENST00000444983 1680 ntTSL 1 (best) BASIC10.18□□□□□ -0.78
ALMS1Q8TCU4 SPDYE6-201ENST00000563237 1691 ntAPPRIS P1 TSL 5 BASIC10.18□□□□□ -0.78
ALMS1Q8TCU4 AKT2-210ENST00000424901 5170 ntTSL 5 BASIC10.18□□□□□ -0.78
ALMS1Q8TCU4 NSFL1C-206ENST00000476071 2800 ntTSL 5 BASIC10.18□□□□□ -0.78
ALMS1Q8TCU4 TP53I3-203ENST00000407482 747 ntTSL 1 (best) BASIC10.18□□□□□ -0.78
ALMS1Q8TCU4 RAD51C-203ENST00000421782 567 ntTSL 1 (best) BASIC10.18□□□□□ -0.78
ALMS1Q8TCU4 DCST1-AS1-201ENST00000452962 822 ntTSL 2 BASIC10.18□□□□□ -0.78
ALMS1Q8TCU4 AC130709.1-201ENST00000484779 1212 ntBASIC10.18□□□□□ -0.78
ALMS1Q8TCU4 AC079325.2-202ENST00000641031 462 ntAPPRIS ALT2 BASIC10.18□□□□□ -0.78
ALMS1Q8TCU4 AC079325.2-201ENST00000641710 606 ntAPPRIS P5 BASIC10.18□□□□□ -0.78
ALMS1Q8TCU4 MAGEA2-207ENST00000620710 1947 ntAPPRIS P1 TSL 2 BASIC10.18□□□□□ -0.78
ALMS1Q8TCU4 ZNF211-201ENST00000240731 2440 ntAPPRIS P4 TSL 2 BASIC10.18□□□□□ -0.78
ALMS1Q8TCU4 MOB3A-201ENST00000357066 3391 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
ALMS1Q8TCU4 CLU-215ENST00000523500 2381 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
ALMS1Q8TCU4 PTHLH-201ENST00000201015 1872 ntAPPRIS P3 TSL 3 BASIC10.18□□□□□ -0.78
ALMS1Q8TCU4 GALNT18-201ENST00000227756 2504 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
ALMS1Q8TCU4 ADIRF-AS1-201ENST00000418273 2627 ntTSL 3 BASIC10.18□□□□□ -0.78
ALMS1Q8TCU4 BAIAP2-205ENST00000435091 2129 ntAPPRIS ALT2 TSL 1 (best) BASIC10.18□□□□□ -0.78
ALMS1Q8TCU4 RNASE1-202ENST00000397967 1348 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
ALMS1Q8TCU4 PIGL-201ENST00000225609 1137 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
ALMS1Q8TCU4 RAB25-201ENST00000361084 1110 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
ALMS1Q8TCU4 ASB3-202ENST00000394717 1734 ntTSL 2 BASIC10.18□□□□□ -0.78
ALMS1Q8TCU4 DARS-AS1-204ENST00000444406 442 ntTSL 2 BASIC10.18□□□□□ -0.78
ALMS1Q8TCU4 FAM86KP-201ENST00000509817 987 ntBASIC10.18□□□□□ -0.78
ALMS1Q8TCU4 AC138123.2-203ENST00000552451 653 ntTSL 3 BASIC10.18□□□□□ -0.78
ALMS1Q8TCU4 TCL1A-205ENST00000555202 717 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
ALMS1Q8TCU4 EDNRB-204ENST00000626030 1571 ntTSL 1 (best) BASIC10.18□□□□□ -0.78
ALMS1Q8TCU4 DDX5-235ENST00000630471 473 ntTSL 4 BASIC10.18□□□□□ -0.78
ALMS1Q8TCU4 CLDND1-222ENST00000510545 2124 ntAPPRIS P1 TSL 5 BASIC10.18□□□□□ -0.78
ALMS1Q8TCU4 C11orf71-202ENST00000623205 1980 ntAPPRIS ALT2 BASIC10.17□□□□□ -0.78
ALMS1Q8TCU4 AL157414.3-201ENST00000624276 1954 ntBASIC10.17□□□□□ -0.78
ALMS1Q8TCU4 AC068987.4-201ENST00000562343 2094 ntTSL 5 BASIC10.17□□□□□ -0.78
ALMS1Q8TCU4 SH2D3C-213ENST00000629203 2478 ntTSL 2 BASIC10.17□□□□□ -0.78
ALMS1Q8TCU4 AL162311.3-201ENST00000555918 2867 ntTSL 2 BASIC10.17□□□□□ -0.78
ALMS1Q8TCU4 CBSL-202ENST00000617706 2563 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
ALMS1Q8TCU4 CD300A-202ENST00000360141 1858 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
ALMS1Q8TCU4 PLEKHJ1-211ENST00000589097 2251 ntAPPRIS P1 TSL 2 BASIC10.17□□□□□ -0.78
ALMS1Q8TCU4 SVOPL-201ENST00000288513 1413 ntTSL 2 BASIC10.17□□□□□ -0.78
ALMS1Q8TCU4 LINC01815-202ENST00000641468 1409 ntBASIC10.17□□□□□ -0.78
ALMS1Q8TCU4 CRB3-201ENST00000308243 631 ntAPPRIS ALT2 TSL 2 BASIC10.17□□□□□ -0.78
ALMS1Q8TCU4 RASSF3-202ENST00000336061 1030 ntTSL 1 (best) BASIC10.17□□□□□ -0.78
ALMS1Q8TCU4 COX20P1-201ENST00000366529 357 ntBASIC10.17□□□□□ -0.78
ALMS1Q8TCU4 GLIS3-AS1-201ENST00000451340 734 ntTSL 1 (best) BASIC10.17□□□□□ -0.78
ALMS1Q8TCU4 AF111169.2-201ENST00000553758 721 ntTSL 3 BASIC10.17□□□□□ -0.78
ALMS1Q8TCU4 AC103810.10-201ENST00000606504 343 ntBASIC10.17□□□□□ -0.78
ALMS1Q8TCU4 ADGRG3-202ENST00000450388 1785 ntAPPRIS ALT2 TSL 2 BASIC10.17□□□□□ -0.78
ALMS1Q8TCU4 ACAP1-201ENST00000158762 2512 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
ALMS1Q8TCU4 FAM156B-202ENST00000509613 1701 ntAPPRIS P2 TSL 2 BASIC10.17□□□□□ -0.78
ALMS1Q8TCU4 ASAH1-254ENST00000637636 2218 ntAPPRIS ALT1 TSL 5 BASIC10.17□□□□□ -0.78
ALMS1Q8TCU4 TTC8-202ENST00000345383 2329 ntTSL 5 BASIC10.17□□□□□ -0.78
ALMS1Q8TCU4 CA12-203ENST00000422263 2556 ntTSL 2 BASIC10.17□□□□□ -0.78
ALMS1Q8TCU4 C1orf228-219ENST00000535358 1685 ntAPPRIS P2 TSL 5 BASIC10.17□□□□□ -0.78
ALMS1Q8TCU4 ABHD4-201ENST00000216327 716 ntTSL 5 BASIC10.17□□□□□ -0.78
ALMS1Q8TCU4 CDKN2C-202ENST00000371761 1220 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
ALMS1Q8TCU4 RPS9-204ENST00000391753 709 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
ALMS1Q8TCU4 AL139241.1-201ENST00000433374 1168 ntTSL 1 (best) BASIC10.17□□□□□ -0.78
ALMS1Q8TCU4 LINC00513-201ENST00000447430 1616 ntTSL 5 BASIC10.17□□□□□ -0.78
ALMS1Q8TCU4 DNM1-216ENST00000634267 2909 ntTSL 5 BASIC10.17□□□□□ -0.78
ALMS1Q8TCU4 IGFBP3-203ENST00000381086 2322 ntTSL 2 BASIC10.17□□□□□ -0.78
ALMS1Q8TCU4 CISH-202ENST00000443053 2167 ntTSL 1 (best) BASIC10.17□□□□□ -0.78
ALMS1Q8TCU4 AIFM3-202ENST00000399167 2387 ntAPPRIS P3 TSL 2 BASIC10.17□□□□□ -0.78
Retrieved 100 of 98,524 protein–RNA pairs in 48.9 ms