Protein–RNA interactions for Protein: Q8NHX4

SPATA3, Spermatogenesis-associated protein 3, humanhuman

Predictions only

Length 192 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPATA3Q8NHX4 CD300A-205ENST00000577511 1459 ntTSL 1 (best) BASIC12.08□□□□□ -0.47
SPATA3Q8NHX4 SH2D3C-203ENST00000373277 2750 ntAPPRIS ALT2 TSL 1 (best) BASIC12.08□□□□□ -0.48
SPATA3Q8NHX4 PFKP-202ENST00000381075 2769 ntTSL 2 BASIC12.08□□□□□ -0.48
SPATA3Q8NHX4 AL953897.1-201ENST00000376620 1868 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
SPATA3Q8NHX4 SLCO6A1-207ENST00000513675 1611 ntTSL 2 BASIC12.08□□□□□ -0.48
SPATA3Q8NHX4 TRPV4-205ENST00000537083 2436 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
SPATA3Q8NHX4 FAM53A-201ENST00000308132 2802 ntAPPRIS P1 TSL 2 BASIC12.08□□□□□ -0.48
SPATA3Q8NHX4 GJB3-201ENST00000373362 1797 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
SPATA3Q8NHX4 MEG3-206ENST00000423456 1771 ntTSL 2 BASIC12.08□□□□□ -0.48
SPATA3Q8NHX4 HMOX2-205ENST00000458134 1797 ntAPPRIS P1 TSL 5 BASIC12.08□□□□□ -0.48
SPATA3Q8NHX4 DNAJB8-AS1-201ENST00000471626 1798 ntTSL 2 BASIC12.08□□□□□ -0.48
SPATA3Q8NHX4 BSG-204ENST00000545507 1795 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
SPATA3Q8NHX4 AL034550.2-201ENST00000620523 1771 ntTSL 2 BASIC12.08□□□□□ -0.48
SPATA3Q8NHX4 ELP5-202ENST00000356683 2197 ntTSL 5 BASIC12.08□□□□□ -0.48
SPATA3Q8NHX4 ARHGEF28-212ENST00000513042 6273 ntAPPRIS ALT2 TSL 5 BASIC12.08□□□□□ -0.48
SPATA3Q8NHX4 ZCCHC17-206ENST00000616393 1534 ntTSL 5 BASIC12.08□□□□□ -0.48
SPATA3Q8NHX4 ALOX12P2-203ENST00000570921 1945 ntBASIC12.08□□□□□ -0.48
SPATA3Q8NHX4 CCDC116-203ENST00000607942 1913 ntAPPRIS ALT2 TSL 2 BASIC12.08□□□□□ -0.48
SPATA3Q8NHX4 NYX-201ENST00000342595 2713 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
SPATA3Q8NHX4 KIAA1324L-207ENST00000444627 3527 ntTSL 5 BASIC12.08□□□□□ -0.48
SPATA3Q8NHX4 BRPF1-203ENST00000424362 4712 ntAPPRIS ALT1 TSL 1 (best) BASIC12.08□□□□□ -0.48
SPATA3Q8NHX4 KRT35-202ENST00000393989 1670 ntAPPRIS P1 TSL 5 BASIC12.08□□□□□ -0.48
SPATA3Q8NHX4 SSR4-203ENST00000370086 643 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
SPATA3Q8NHX4 NRM-202ENST00000376420 1228 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
SPATA3Q8NHX4 AC004522.1-201ENST00000419978 654 ntBASIC12.08□□□□□ -0.48
SPATA3Q8NHX4 HDAC2-AS2-203ENST00000436876 591 ntTSL 5 BASIC12.08□□□□□ -0.48
SPATA3Q8NHX4 PUDPP3-201ENST00000445368 636 ntBASIC12.08□□□□□ -0.48
SPATA3Q8NHX4 LINC01875-201ENST00000454477 660 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
SPATA3Q8NHX4 AC092535.3-201ENST00000504969 468 ntTSL 3 BASIC12.08□□□□□ -0.48
SPATA3Q8NHX4 LINC00461-207ENST00000506978 564 ntTSL 5 BASIC12.08□□□□□ -0.48
SPATA3Q8NHX4 TMEM208-207ENST00000563953 887 ntTSL 2 BASIC12.08□□□□□ -0.48
SPATA3Q8NHX4 SHBG-207ENST00000570547 801 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
SPATA3Q8NHX4 AC138894.2-201ENST00000602838 371 ntBASIC12.08□□□□□ -0.48
SPATA3Q8NHX4 AC021016.3-201ENST00000608367 477 ntBASIC12.08□□□□□ -0.48
SPATA3Q8NHX4 GHRHR-212ENST00000611037 923 ntTSL 5 BASIC12.08□□□□□ -0.48
SPATA3Q8NHX4 AC073592.2-201ENST00000623062 780 ntBASIC12.08□□□□□ -0.48
SPATA3Q8NHX4 DDX5-235ENST00000630471 473 ntTSL 4 BASIC12.08□□□□□ -0.48
SPATA3Q8NHX4 PTGER3-208ENST00000370932 1841 ntAPPRIS ALT2 TSL 5 BASIC12.08□□□□□ -0.48
SPATA3Q8NHX4 NPY4R-202ENST00000612632 1800 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
SPATA3Q8NHX4 NPY4R2-202ENST00000613306 1800 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
SPATA3Q8NHX4 PLCG1-201ENST00000244007 5285 ntAPPRIS P4 TSL 5 BASIC12.08□□□□□ -0.48
SPATA3Q8NHX4 CXorf38-201ENST00000327877 2118 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
SPATA3Q8NHX4 NOMO2-202ENST00000381474 3911 ntAPPRIS ALT2 TSL 5 BASIC12.08□□□□□ -0.48
SPATA3Q8NHX4 FBXL5-202ENST00000412094 2837 ntAPPRIS ALT1 TSL 1 (best) BASIC12.08□□□□□ -0.48
SPATA3Q8NHX4 TRMT1-203ENST00000437766 2263 ntAPPRIS P3 TSL 1 (best) BASIC12.08□□□□□ -0.48
SPATA3Q8NHX4 AC026688.2-201ENST00000518984 1734 ntTSL 3 BASIC12.08□□□□□ -0.48
SPATA3Q8NHX4 AP1M1-211ENST00000590756 1705 ntTSL 5 BASIC12.08□□□□□ -0.48
SPATA3Q8NHX4 SCARB2-201ENST00000264896 4792 ntAPPRIS P2 TSL 1 (best) BASIC12.08□□□□□ -0.48
SPATA3Q8NHX4 AC080080.1-201ENST00000625121 2420 ntBASIC12.08□□□□□ -0.48
SPATA3Q8NHX4 CLSTN1-202ENST00000377298 5221 ntAPPRIS ALT2 TSL 1 (best) BASIC12.08□□□□□ -0.48
SPATA3Q8NHX4 AL109910.1-201ENST00000452071 1330 ntTSL 2 BASIC12.08□□□□□ -0.48
SPATA3Q8NHX4 LINC02370-201ENST00000428272 2009 ntTSL 5 BASIC12.08□□□□□ -0.48
SPATA3Q8NHX4 LSMEM2-201ENST00000316436 1494 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
SPATA3Q8NHX4 CHRNA1-203ENST00000409219 1466 ntTSL 3 BASIC12.08□□□□□ -0.48
SPATA3Q8NHX4 WIPF1-201ENST00000272746 3028 ntAPPRIS ALT2 TSL 1 (best) BASIC12.08□□□□□ -0.48
SPATA3Q8NHX4 C5orf30-201ENST00000319933 3049 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
SPATA3Q8NHX4 THSD1-202ENST00000349258 3189 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
SPATA3Q8NHX4 CEP128-201ENST00000216517 1606 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
SPATA3Q8NHX4 CRLF2-203ENST00000400841 1639 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
SPATA3Q8NHX4 RIC8B-213ENST00000638198 1611 ntTSL 5 BASIC12.08□□□□□ -0.48
SPATA3Q8NHX4 BID-201ENST00000317361 2495 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
SPATA3Q8NHX4 IL6R-202ENST00000368485 5914 ntAPPRIS P4 TSL 1 (best) BASIC12.07□□□□□ -0.48
SPATA3Q8NHX4 CYP4F3-202ENST00000585846 2056 ntAPPRIS ALT1 TSL 1 (best) BASIC12.07□□□□□ -0.48
SPATA3Q8NHX4 PHF12-205ENST00000577226 7679 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
SPATA3Q8NHX4 COL4A3BP-203ENST00000380494 5651 ntTSL 2 BASIC12.07□□□□□ -0.48
SPATA3Q8NHX4 TSC22D4-201ENST00000300181 2383 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
SPATA3Q8NHX4 TTC8-216ENST00000614125 2377 ntTSL 5 BASIC12.07□□□□□ -0.48
SPATA3Q8NHX4 AC090515.2-201ENST00000500929 1396 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
SPATA3Q8NHX4 SART1-201ENST00000312397 3293 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
SPATA3Q8NHX4 CYB5R1-201ENST00000367249 1651 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
SPATA3Q8NHX4 FBXO33-201ENST00000298097 3853 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
SPATA3Q8NHX4 PCK2-205ENST00000558096 2433 ntTSL 2 BASIC12.07□□□□□ -0.48
SPATA3Q8NHX4 NKAIN1-201ENST00000373736 2589 ntAPPRIS P1 TSL 2 BASIC12.07□□□□□ -0.48
SPATA3Q8NHX4 MEPCE-201ENST00000310512 3030 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
SPATA3Q8NHX4 ELF3-201ENST00000359651 4994 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
SPATA3Q8NHX4 ZNF354C-201ENST00000315475 5411 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
SPATA3Q8NHX4 PYCR1-201ENST00000329875 1855 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
SPATA3Q8NHX4 ATG10-202ENST00000355178 1438 ntTSL 2 BASIC12.07□□□□□ -0.48
SPATA3Q8NHX4 POLR3E-202ENST00000359210 2469 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
SPATA3Q8NHX4 PDGFB-202ENST00000381551 1125 ntTSL 5 BASIC12.07□□□□□ -0.48
SPATA3Q8NHX4 METTL6-201ENST00000383789 1413 ntTSL 2 BASIC12.07□□□□□ -0.48
SPATA3Q8NHX4 ACTBP8-201ENST00000403258 1108 ntBASIC12.07□□□□□ -0.48
SPATA3Q8NHX4 IP6K2-205ENST00000413298 792 ntTSL 3 BASIC12.07□□□□□ -0.48
SPATA3Q8NHX4 AC012442.2-201ENST00000414784 425 ntTSL 2 BASIC12.07□□□□□ -0.48
SPATA3Q8NHX4 TREX1-202ENST00000444177 1200 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
SPATA3Q8NHX4 KRT18P43-201ENST00000469825 1281 ntBASIC12.07□□□□□ -0.48
SPATA3Q8NHX4 NCK1-AS1-203ENST00000474250 827 ntTSL 2 BASIC12.07□□□□□ -0.48
SPATA3Q8NHX4 APOPT1-209ENST00000492189 513 ntTSL 3 BASIC12.07□□□□□ -0.48
SPATA3Q8NHX4 PRSS30P-205ENST00000506153 699 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
SPATA3Q8NHX4 TBX6-203ENST00000553607 2162 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
SPATA3Q8NHX4 FOS-204ENST00000554617 796 ntTSL 2 BASIC12.07□□□□□ -0.48
SPATA3Q8NHX4 ERVK13-1-204ENST00000566343 567 ntTSL 4 BASIC12.07□□□□□ -0.48
SPATA3Q8NHX4 AC005901.1-201ENST00000592766 552 ntTSL 4 BASIC12.07□□□□□ -0.48
SPATA3Q8NHX4 GRIA3-205ENST00000611689 936 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
SPATA3Q8NHX4 AP001002.3-201ENST00000623482 206 ntBASIC12.07□□□□□ -0.48
SPATA3Q8NHX4 BX539320.1-201ENST00000623759 877 ntBASIC12.07□□□□□ -0.48
SPATA3Q8NHX4 GIT1-203ENST00000394869 3711 ntAPPRIS ALT2 TSL 1 (best) BASIC12.07□□□□□ -0.48
SPATA3Q8NHX4 CERCAM-201ENST00000372838 2685 ntAPPRIS P3 TSL 1 (best) BASIC12.07□□□□□ -0.48
SPATA3Q8NHX4 NCK1-201ENST00000288986 1937 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
SPATA3Q8NHX4 HNRNPR-204ENST00000427764 1788 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Retrieved 100 of 98,524 protein–RNA pairs in 52.9 ms