Protein–RNA interactions for Protein: Q8NDH2

CCDC168, Coiled-coil domain-containing protein 168, humanhuman

Predictions only

Length 2,452 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC168Q8NDH2 MRPL49-209ENST00000534078 518 ntTSL 2 BASIC12.89□□□□□ -0.35
CCDC168Q8NDH2 NAT9-211ENST00000580632 799 ntTSL 3 BASIC12.89□□□□□ -0.35
CCDC168Q8NDH2 TMEM101-204ENST00000587529 965 ntTSL 2 BASIC12.89□□□□□ -0.35
CCDC168Q8NDH2 UBL5-208ENST00000593087 320 ntTSL 3 BASIC12.89□□□□□ -0.35
CCDC168Q8NDH2 GHRHR-212ENST00000611037 923 ntTSL 5 BASIC12.89□□□□□ -0.35
CCDC168Q8NDH2 AC090164.2-201ENST00000611487 516 ntBASIC12.89□□□□□ -0.35
CCDC168Q8NDH2 CPAMD8-203ENST00000443236 5992 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
CCDC168Q8NDH2 SYVN1-203ENST00000377190 3052 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
CCDC168Q8NDH2 SERPING1-204ENST00000378324 1751 ntAPPRIS ALT2 TSL 2 BASIC12.89□□□□□ -0.35
CCDC168Q8NDH2 NFIC-202ENST00000395111 1755 ntTSL 2 BASIC12.89□□□□□ -0.35
CCDC168Q8NDH2 AC092171.3-201ENST00000610122 2651 ntBASIC12.89□□□□□ -0.35
CCDC168Q8NDH2 FAM222A-201ENST00000358906 2731 ntAPPRIS P1 TSL 5 BASIC12.89□□□□□ -0.35
CCDC168Q8NDH2 FAM234A-203ENST00000399932 3213 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
CCDC168Q8NDH2 METTL6-201ENST00000383789 1413 ntTSL 2 BASIC12.89□□□□□ -0.35
CCDC168Q8NDH2 PACS2-202ENST00000430725 2944 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
CCDC168Q8NDH2 TNFSF8-203ENST00000618336 1523 ntTSL 3 BASIC12.89□□□□□ -0.35
CCDC168Q8NDH2 VIPR1-201ENST00000325123 2773 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
CCDC168Q8NDH2 TRMT6-201ENST00000203001 2327 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
CCDC168Q8NDH2 MAG-203ENST00000537831 2341 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
CCDC168Q8NDH2 ZNF419-207ENST00000442920 1857 ntAPPRIS ALT2 TSL 2 BASIC12.88□□□□□ -0.35
CCDC168Q8NDH2 DKK4-201ENST00000220812 894 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
CCDC168Q8NDH2 ALG1L-201ENST00000340333 805 ntAPPRIS P3 TSL 1 (best) BASIC12.88□□□□□ -0.35
CCDC168Q8NDH2 WDR54-201ENST00000348227 1147 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
CCDC168Q8NDH2 CIDEC-202ENST00000383817 1199 ntAPPRIS ALT1 TSL 1 (best) BASIC12.88□□□□□ -0.35
CCDC168Q8NDH2 NSUN5P1-203ENST00000422386 972 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
CCDC168Q8NDH2 VEGFB-202ENST00000426086 979 ntAPPRIS ALT1 TSL 1 (best) BASIC12.88□□□□□ -0.35
CCDC168Q8NDH2 FAU-202ENST00000434372 533 ntTSL 2 BASIC12.88□□□□□ -0.35
CCDC168Q8NDH2 AGPAT5P1-201ENST00000455855 1019 ntBASIC12.88□□□□□ -0.35
CCDC168Q8NDH2 TMEM14B-210ENST00000473276 730 ntTSL 3 BASIC12.88□□□□□ -0.35
CCDC168Q8NDH2 AC021723.1-201ENST00000486306 515 ntBASIC12.88□□□□□ -0.35
CCDC168Q8NDH2 AC005586.1-201ENST00000488310 577 ntTSL 4 BASIC12.88□□□□□ -0.35
CCDC168Q8NDH2 AC103988.2-201ENST00000561804 725 ntBASIC12.88□□□□□ -0.35
CCDC168Q8NDH2 AC012044.1-201ENST00000603431 297 ntBASIC12.88□□□□□ -0.35
CCDC168Q8NDH2 ALG1L-202ENST00000611639 701 ntAPPRIS ALT2 TSL 3 BASIC12.88□□□□□ -0.35
CCDC168Q8NDH2 ANGPTL8-204ENST00000616433 1223 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
CCDC168Q8NDH2 PAXBP1-202ENST00000331923 3995 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
CCDC168Q8NDH2 SNRNP27-202ENST00000409116 1339 ntTSL 5 BASIC12.88□□□□□ -0.35
CCDC168Q8NDH2 DAGLB-202ENST00000425398 2044 ntTSL 2 BASIC12.88□□□□□ -0.35
CCDC168Q8NDH2 AC090515.2-201ENST00000500929 1396 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
CCDC168Q8NDH2 KIAA1614-AS1-201ENST00000415647 1440 ntTSL 2 BASIC12.88□□□□□ -0.35
CCDC168Q8NDH2 DARS-AS1-209ENST00000594219 1420 ntTSL 5 BASIC12.88□□□□□ -0.35
CCDC168Q8NDH2 ANKRD23-203ENST00000418232 2156 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
CCDC168Q8NDH2 TPM1-201ENST00000267996 1670 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
CCDC168Q8NDH2 LGALS12-205ENST00000425950 1789 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
CCDC168Q8NDH2 AC148477.4-201ENST00000613430 1793 ntBASIC12.88□□□□□ -0.35
CCDC168Q8NDH2 AP005717.1-201ENST00000500705 1899 ntTSL 5 BASIC12.88□□□□□ -0.35
CCDC168Q8NDH2 ANTXRL-206ENST00000622632 1964 ntAPPRIS ALT2 TSL 5 BASIC12.88□□□□□ -0.35
CCDC168Q8NDH2 SENP5-201ENST00000323460 6308 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
CCDC168Q8NDH2 FAM49B-223ENST00000522746 2196 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
CCDC168Q8NDH2 FBXL5-201ENST00000341285 3385 ntAPPRIS P3 TSL 1 (best) BASIC12.88□□□□□ -0.35
CCDC168Q8NDH2 PPP1R3B-202ENST00000519699 2334 ntAPPRIS P1 TSL 2 BASIC12.88□□□□□ -0.35
CCDC168Q8NDH2 AL139094.1-201ENST00000405549 1188 ntBASIC12.88□□□□□ -0.35
CCDC168Q8NDH2 AC099552.2-201ENST00000418523 456 ntTSL 3 BASIC12.88□□□□□ -0.35
CCDC168Q8NDH2 NUBP1-202ENST00000433392 1185 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
CCDC168Q8NDH2 AC026410.1-201ENST00000507366 1101 ntBASIC12.88□□□□□ -0.35
CCDC168Q8NDH2 AC113383.1-201ENST00000514696 582 ntTSL 4 BASIC12.88□□□□□ -0.35
CCDC168Q8NDH2 REC114-202ENST00000560581 833 ntAPPRIS ALT2 TSL 2 BASIC12.88□□□□□ -0.35
CCDC168Q8NDH2 AC008687.1-201ENST00000591656 786 ntAPPRIS P1 TSL 2 BASIC12.88□□□□□ -0.35
CCDC168Q8NDH2 GPR39-203ENST00000622084 900 ntTSL 5 BASIC12.88□□□□□ -0.35
CCDC168Q8NDH2 AP001002.3-201ENST00000623482 206 ntBASIC12.88□□□□□ -0.35
CCDC168Q8NDH2 ASCC2-223ENST00000542393 2594 ntTSL 2 BASIC12.88□□□□□ -0.35
CCDC168Q8NDH2 DTX2-206ENST00000430490 2623 ntAPPRIS P3 TSL 1 (best) BASIC12.88□□□□□ -0.35
CCDC168Q8NDH2 RAPH1-211ENST00000457812 2673 ntAPPRIS ALT2 TSL 2 BASIC12.88□□□□□ -0.35
CCDC168Q8NDH2 UBL7-AS1-203ENST00000564621 1612 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
CCDC168Q8NDH2 AMT-233ENST00000636522 1620 ntTSL 2 BASIC12.88□□□□□ -0.35
CCDC168Q8NDH2 GOLGA2P3Y-201ENST00000416946 1653 ntBASIC12.88□□□□□ -0.35
CCDC168Q8NDH2 MEF2C-AS1-210ENST00000514011 1754 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
CCDC168Q8NDH2 B3GALNT1-203ENST00000392781 3606 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
CCDC168Q8NDH2 HPCAL1-202ENST00000381765 1904 ntAPPRIS P1 TSL 2 BASIC12.88□□□□□ -0.35
CCDC168Q8NDH2 HPCAL1-207ENST00000620771 1941 ntAPPRIS P1 TSL 2 BASIC12.88□□□□□ -0.35
CCDC168Q8NDH2 CERNA1-202ENST00000560518 1972 ntTSL 2 BASIC12.88□□□□□ -0.35
CCDC168Q8NDH2 PSEN2-211ENST00000626989 1972 ntTSL 5 BASIC12.88□□□□□ -0.35
CCDC168Q8NDH2 HOXB3-205ENST00000470495 4208 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
CCDC168Q8NDH2 IGLON5-201ENST00000270642 2606 ntAPPRIS P1 TSL 5 BASIC12.88□□□□□ -0.35
CCDC168Q8NDH2 FAM53A-207ENST00000489363 2776 ntTSL 2 BASIC12.88□□□□□ -0.35
CCDC168Q8NDH2 HOXC6-202ENST00000394331 2943 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
CCDC168Q8NDH2 EML3-212ENST00000494176 2901 ntTSL 2 BASIC12.88□□□□□ -0.35
CCDC168Q8NDH2 EML3-216ENST00000529309 2909 ntTSL 2 BASIC12.88□□□□□ -0.35
CCDC168Q8NDH2 KDM1A-202ENST00000400181 3059 ntAPPRIS ALT2 TSL 1 (best) BASIC12.88□□□□□ -0.35
CCDC168Q8NDH2 IMPAD1-201ENST00000262644 7199 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
CCDC168Q8NDH2 ARRDC4-201ENST00000268042 4072 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
CCDC168Q8NDH2 PCTP-201ENST00000268896 2044 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
CCDC168Q8NDH2 ITGA7-202ENST00000347027 4084 ntAPPRIS ALT2 TSL 5 BASIC12.87□□□□□ -0.35
CCDC168Q8NDH2 PPIE-202ENST00000356511 1079 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
CCDC168Q8NDH2 CXorf40A-201ENST00000359293 974 ntAPPRIS P3 TSL 2 BASIC12.87□□□□□ -0.35
CCDC168Q8NDH2 ETNK2-203ENST00000367202 2434 ntAPPRIS P3 TSL 1 (best) BASIC12.87□□□□□ -0.35
CCDC168Q8NDH2 MBTD1-201ENST00000376381 1420 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
CCDC168Q8NDH2 NRM-202ENST00000376420 1228 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
CCDC168Q8NDH2 SCAF11-203ENST00000395453 1336 ntAPPRIS ALT2 TSL 2 BASIC12.87□□□□□ -0.35
CCDC168Q8NDH2 RPL3-202ENST00000401609 1289 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
CCDC168Q8NDH2 NREP-204ENST00000419114 704 ntAPPRIS P1 TSL 2 BASIC12.87□□□□□ -0.35
CCDC168Q8NDH2 AC233976.1-201ENST00000425150 451 ntTSL 3 BASIC12.87□□□□□ -0.35
CCDC168Q8NDH2 SLC25A19-205ENST00000442286 1496 ntAPPRIS P1 TSL 5 BASIC12.87□□□□□ -0.35
CCDC168Q8NDH2 AC096649.1-201ENST00000449168 497 ntTSL 3 BASIC12.87□□□□□ -0.35
CCDC168Q8NDH2 KLK11-204ENST00000453757 1174 ntAPPRIS ALT2 TSL 1 (best) BASIC12.87□□□□□ -0.35
CCDC168Q8NDH2 BX322559.1-201ENST00000456613 319 ntTSL 3 BASIC12.87□□□□□ -0.35
CCDC168Q8NDH2 BUD31-205ENST00000456893 512 ntTSL 5 BASIC12.87□□□□□ -0.35
CCDC168Q8NDH2 KRBOX4-206ENST00000478600 730 ntAPPRIS ALT2 TSL 2 BASIC12.87□□□□□ -0.35
CCDC168Q8NDH2 RN7SL67P-201ENST00000492147 296 ntBASIC12.87□□□□□ -0.35
CCDC168Q8NDH2 CD59-210ENST00000528700 652 ntAPPRIS P2 TSL 2 BASIC12.87□□□□□ -0.35
Retrieved 100 of 98,524 protein–RNA pairs in 33.4 ms