Protein–RNA interactions for Protein: Q8N2S1

LTBP4, Latent-transforming growth factor beta-binding protein 4, humanhuman

Predictions only

Length 1,624 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LTBP4Q8N2S1 UNG-201ENST00000242576 2071 ntAPPRIS P4 TSL 1 (best) BASIC20.8■□□□□ 0.92
LTBP4Q8N2S1 SPDYE6-201ENST00000563237 1691 ntAPPRIS P1 TSL 5 BASIC20.8■□□□□ 0.92
LTBP4Q8N2S1 TXNDC9-201ENST00000264255 1637 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
LTBP4Q8N2S1 LAIR1-209ENST00000434277 1645 ntAPPRIS ALT2 TSL 2 BASIC20.8■□□□□ 0.92
LTBP4Q8N2S1 EFHD1-207ENST00000611312 1490 ntTSL 5 BASIC20.8■□□□□ 0.92
LTBP4Q8N2S1 BTBD8-201ENST00000342818 1412 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
LTBP4Q8N2S1 PANX1-202ENST00000436171 2750 ntAPPRIS ALT1 TSL 1 (best) BASIC20.8■□□□□ 0.92
LTBP4Q8N2S1 DAD1-201ENST00000250498 731 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
LTBP4Q8N2S1 SNORA57-201ENST00000383870 149 ntBASIC20.8■□□□□ 0.92
LTBP4Q8N2S1 IGHV3-43-201ENST00000434710 434 ntAPPRIS P1 BASIC20.8■□□□□ 0.92
LTBP4Q8N2S1 BPIFB5P-201ENST00000457066 1099 ntBASIC20.8■□□□□ 0.92
LTBP4Q8N2S1 AC004889.1-205ENST00000493248 531 ntTSL 4 BASIC20.8■□□□□ 0.92
LTBP4Q8N2S1 OR2A1-AS1-210ENST00000496968 531 ntBASIC20.8■□□□□ 0.92
LTBP4Q8N2S1 HOXC-AS3-203ENST00000514702 368 ntTSL 3 BASIC20.8■□□□□ 0.92
LTBP4Q8N2S1 AC090820.1-201ENST00000519722 591 ntBASIC20.8■□□□□ 0.92
LTBP4Q8N2S1 LINC01485-202ENST00000520324 566 ntTSL 4 BASIC20.8■□□□□ 0.92
LTBP4Q8N2S1 TMEM123-208ENST00000532161 743 ntAPPRIS ALT2 TSL 3 BASIC20.8■□□□□ 0.92
LTBP4Q8N2S1 AC003006.1-202ENST00000594684 612 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
LTBP4Q8N2S1 PAX4-207ENST00000611453 1235 ntTSL 5 BASIC20.8■□□□□ 0.92
LTBP4Q8N2S1 AP001043.1-206ENST00000613045 730 ntTSL 5 BASIC20.8■□□□□ 0.92
LTBP4Q8N2S1 KMT5C-212ENST00000630497 2037 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
LTBP4Q8N2S1 BTBD10-208ENST00000528120 1662 ntTSL 2 BASIC20.8■□□□□ 0.92
LTBP4Q8N2S1 ANP32A-203ENST00000465139 2440 ntAPPRIS P2 TSL 1 (best) BASIC20.8■□□□□ 0.92
LTBP4Q8N2S1 SUCLA2-205ENST00000470760 1445 ntTSL 2 BASIC20.79■□□□□ 0.92
LTBP4Q8N2S1 SPATA20-226ENST00000619622 2769 ntAPPRIS P2 TSL 5 BASIC20.79■□□□□ 0.92
LTBP4Q8N2S1 SLC25A48-203ENST00000425402 2062 ntTSL 5 BASIC20.79■□□□□ 0.92
LTBP4Q8N2S1 DHRS7-209ENST00000557185 1322 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
LTBP4Q8N2S1 RASA4B-201ENST00000306682 2589 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
LTBP4Q8N2S1 PCBD1-201ENST00000299299 1006 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
LTBP4Q8N2S1 CFAP36-203ENST00000403007 759 ntTSL 2 BASIC20.79■□□□□ 0.92
LTBP4Q8N2S1 BX284668.5-201ENST00000422124 406 ntTSL 2 BASIC20.79■□□□□ 0.92
LTBP4Q8N2S1 AC092295.1-201ENST00000446262 434 ntTSL 3 BASIC20.79■□□□□ 0.92
LTBP4Q8N2S1 RGS5-216ENST00000449680 788 ntTSL 3 BASIC20.79■□□□□ 0.92
LTBP4Q8N2S1 CASP3-205ENST00000517513 964 ntTSL 5 BASIC20.79■□□□□ 0.92
LTBP4Q8N2S1 RNASEK-204ENST00000552039 591 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
LTBP4Q8N2S1 PIGH-209ENST00000559581 1049 ntTSL 4 BASIC20.79■□□□□ 0.92
LTBP4Q8N2S1 AL450487.2-201ENST00000615934 407 ntBASIC20.79■□□□□ 0.92
LTBP4Q8N2S1 OSMR-AS1-204ENST00000636516 850 ntTSL 5 BASIC20.79■□□□□ 0.92
LTBP4Q8N2S1 LSR-212ENST00000602122 2480 ntAPPRIS ALT2 TSL 2 BASIC20.79■□□□□ 0.92
LTBP4Q8N2S1 PORCN-201ENST00000326194 1755 ntAPPRIS P4 TSL 1 (best) BASIC20.79■□□□□ 0.92
LTBP4Q8N2S1 CXCL14-202ENST00000512158 1760 ntAPPRIS ALT2 TSL 1 (best) BASIC20.79■□□□□ 0.92
LTBP4Q8N2S1 CRELD1-203ENST00000397170 1728 ntAPPRIS P1 TSL 5 BASIC20.79■□□□□ 0.92
LTBP4Q8N2S1 CHRNG-202ENST00000389494 2262 ntAPPRIS P1 TSL 5 BASIC20.79■□□□□ 0.92
LTBP4Q8N2S1 LIMS2-209ENST00000410038 1695 ntTSL 2 BASIC20.79■□□□□ 0.92
LTBP4Q8N2S1 EIF3J-201ENST00000261868 2569 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
LTBP4Q8N2S1 PRDM12-201ENST00000253008 2476 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
LTBP4Q8N2S1 SIGLEC6-204ENST00000391797 1391 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
LTBP4Q8N2S1 NIPAL3-204ENST00000374399 1711 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
LTBP4Q8N2S1 EEF1DP5-201ENST00000431410 772 ntBASIC20.78■□□□□ 0.92
LTBP4Q8N2S1 MAGEA7P-201ENST00000436482 942 ntBASIC20.78■□□□□ 0.92
LTBP4Q8N2S1 TIMMDC1-207ENST00000493694 710 ntTSL 2 BASIC20.78■□□□□ 0.92
LTBP4Q8N2S1 IFITM1-204ENST00000528780 730 ntAPPRIS P1 TSL 3 BASIC20.78■□□□□ 0.92
LTBP4Q8N2S1 ANO3-205ENST00000531646 1264 ntTSL 4 BASIC20.78■□□□□ 0.92
LTBP4Q8N2S1 KNOP1P1-201ENST00000542108 989 ntBASIC20.78■□□□□ 0.92
LTBP4Q8N2S1 NR4A1-209ENST00000548232 1101 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
LTBP4Q8N2S1 PRR13-209ENST00000549924 625 ntAPPRIS ALT2 TSL 2 BASIC20.78■□□□□ 0.92
LTBP4Q8N2S1 ZNF772-207ENST00000601768 482 ntTSL 3 BASIC20.78■□□□□ 0.92
LTBP4Q8N2S1 FGD4-203ENST00000472289 1629 ntTSL 2 BASIC20.78■□□□□ 0.92
LTBP4Q8N2S1 ASS1-204ENST00000372394 1973 ntAPPRIS P1 TSL 2 BASIC20.78■□□□□ 0.92
LTBP4Q8N2S1 SCAF11-204ENST00000395454 1931 ntAPPRIS ALT2 TSL 1 (best) BASIC20.78■□□□□ 0.92
LTBP4Q8N2S1 ARHGEF7-214ENST00000478679 1833 ntTSL 2 BASIC20.78■□□□□ 0.92
LTBP4Q8N2S1 ZNF302-214ENST00000613363 2893 ntAPPRIS ALT2 TSL 4 BASIC20.78■□□□□ 0.92
LTBP4Q8N2S1 SCGN-202ENST00000377961 1447 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
LTBP4Q8N2S1 TTLL3-209ENST00000426895 2767 ntAPPRIS P2 TSL 2 BASIC20.78■□□□□ 0.92
LTBP4Q8N2S1 PRSS35-201ENST00000369700 2440 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
LTBP4Q8N2S1 TMC4-209ENST00000617472 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC20.78■□□□□ 0.92
LTBP4Q8N2S1 CDC25B-204ENST00000379598 2990 ntTSL 2 BASIC20.78■□□□□ 0.92
LTBP4Q8N2S1 CEP55-201ENST00000371485 2638 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
LTBP4Q8N2S1 ACBD3-201ENST00000366812 3573 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
LTBP4Q8N2S1 SH2B1-216ENST00000618521 2935 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
LTBP4Q8N2S1 AL121949.3-201ENST00000406684 385 ntBASIC20.78■□□□□ 0.92
LTBP4Q8N2S1 OR2R1P-201ENST00000441404 914 ntBASIC20.78■□□□□ 0.92
LTBP4Q8N2S1 CICP12-201ENST00000455801 843 ntBASIC20.78■□□□□ 0.92
LTBP4Q8N2S1 AC078814.4-201ENST00000546650 327 ntBASIC20.78■□□□□ 0.92
LTBP4Q8N2S1 AC023968.2-201ENST00000560593 1049 ntBASIC20.78■□□□□ 0.92
LTBP4Q8N2S1 AC139099.2-201ENST00000572343 641 ntTSL 3 BASIC20.78■□□□□ 0.92
LTBP4Q8N2S1 AC254633.1-201ENST00000606790 345 ntBASIC20.78■□□□□ 0.92
LTBP4Q8N2S1 AP000769.1-203ENST00000637245 208 ntBASIC20.78■□□□□ 0.92
LTBP4Q8N2S1 TCP11L2-201ENST00000299045 2219 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
LTBP4Q8N2S1 MOAP1-202ENST00000556883 2529 ntAPPRIS P1 TSL 2 BASIC20.78■□□□□ 0.92
LTBP4Q8N2S1 PABPC1L-201ENST00000217073 1851 ntAPPRIS P1 TSL 5 BASIC20.78■□□□□ 0.92
LTBP4Q8N2S1 FAM198A-202ENST00000430121 3121 ntAPPRIS P2 TSL 5 BASIC20.78■□□□□ 0.92
LTBP4Q8N2S1 RBM47-212ENST00000514014 2419 ntTSL 2 BASIC20.78■□□□□ 0.92
LTBP4Q8N2S1 ZNF48-206ENST00000622647 2695 ntTSL 4 BASIC20.77■□□□□ 0.92
LTBP4Q8N2S1 UCN2-201ENST00000273610 1481 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
LTBP4Q8N2S1 TTC9-201ENST00000256367 5217 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
LTBP4Q8N2S1 TMEM189-203ENST00000371656 1973 ntTSL 2 BASIC20.77■□□□□ 0.92
LTBP4Q8N2S1 VASH2-204ENST00000366966 1369 ntTSL 5 BASIC20.77■□□□□ 0.92
LTBP4Q8N2S1 UPK1A-203ENST00000616789 1366 ntTSL 5 BASIC20.77■□□□□ 0.92
LTBP4Q8N2S1 FTX-216ENST00000638985 1367 ntTSL 5 BASIC20.77■□□□□ 0.92
LTBP4Q8N2S1 RSPH3-201ENST00000252655 2175 ntAPPRIS P2 TSL 1 (best) BASIC20.77■□□□□ 0.92
LTBP4Q8N2S1 LONP1-215ENST00000593119 2918 ntTSL 2 BASIC20.77■□□□□ 0.92
LTBP4Q8N2S1 GJB6-202ENST00000356192 2131 ntAPPRIS P1 TSL 2 BASIC20.77■□□□□ 0.92
LTBP4Q8N2S1 TMCO5B-204ENST00000529696 1568 ntTSL 2 BASIC20.77■□□□□ 0.92
LTBP4Q8N2S1 DCP1B-201ENST00000280665 2086 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
LTBP4Q8N2S1 ABCG4-206ENST00000622721 2553 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
LTBP4Q8N2S1 TMEM250-201ENST00000418388 2823 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
LTBP4Q8N2S1 UPK1A-201ENST00000222275 1223 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
LTBP4Q8N2S1 MRPL35-201ENST00000254644 1061 ntAPPRIS ALT1 TSL 1 (best) BASIC20.77■□□□□ 0.92
LTBP4Q8N2S1 FAU-201ENST00000279259 461 ntTSL 2 BASIC20.77■□□□□ 0.92
Retrieved 100 of 98,524 protein–RNA pairs in 54.1 ms