Protein–RNA interactions for Protein: Q8N196

SIX5, Homeobox protein SIX5, humanhuman

Predictions only

Length 739 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SIX5Q8N196 GABARAPL1-217ENST00000545887 571 ntAPPRIS P1 TSL 3 BASIC15.99■□□□□ 0.15
SIX5Q8N196 DIO3OS-203ENST00000554441 1068 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
SIX5Q8N196 HIRIP3-204ENST00000564026 988 ntTSL 2 BASIC15.99■□□□□ 0.15
SIX5Q8N196 YIF1B-215ENST00000592246 936 ntTSL 3 BASIC15.99■□□□□ 0.15
SIX5Q8N196 NDUFV2P1-201ENST00000596415 907 ntBASIC15.99■□□□□ 0.15
SIX5Q8N196 AP005019.2-201ENST00000615104 511 ntBASIC15.99■□□□□ 0.15
SIX5Q8N196 AC132938.4-201ENST00000623835 848 ntBASIC15.99■□□□□ 0.15
SIX5Q8N196 SGSH-201ENST00000326317 2784 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
SIX5Q8N196 TTC13-201ENST00000366661 3253 ntAPPRIS P3 TSL 1 (best) BASIC15.99■□□□□ 0.15
SIX5Q8N196 IFT140-203ENST00000426508 5270 ntAPPRIS P1 TSL 5 BASIC15.99■□□□□ 0.15
SIX5Q8N196 AHDC1-201ENST00000247087 6334 ntAPPRIS P1 TSL 5 BASIC15.99■□□□□ 0.15
SIX5Q8N196 TCTN1-202ENST00000397655 1879 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
SIX5Q8N196 PELP1-208ENST00000572293 5272 ntAPPRIS P2 TSL 1 (best) BASIC15.99■□□□□ 0.15
SIX5Q8N196 BPIFB4-201ENST00000375483 2159 ntAPPRIS P1 TSL 5 BASIC15.99■□□□□ 0.15
SIX5Q8N196 AL592424.1-201ENST00000563624 1536 ntBASIC15.99■□□□□ 0.15
SIX5Q8N196 KLC1-212ENST00000553286 3135 ntTSL 5 BASIC15.99■□□□□ 0.15
SIX5Q8N196 EML3-202ENST00000394773 3256 ntAPPRIS P2 TSL 1 (best) BASIC15.99■□□□□ 0.15
SIX5Q8N196 TMEM57-202ENST00000399766 3294 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
SIX5Q8N196 KRT35-202ENST00000393989 1670 ntAPPRIS P1 TSL 5 BASIC15.99■□□□□ 0.15
SIX5Q8N196 ASB10-201ENST00000275838 1820 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
SIX5Q8N196 DYNLL2-201ENST00000579991 6805 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
SIX5Q8N196 JMJD4-207ENST00000620518 2432 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
SIX5Q8N196 ZBTB46-201ENST00000245663 5185 ntAPPRIS P1 TSL 5 BASIC15.98■□□□□ 0.15
SIX5Q8N196 WIPF3-202ENST00000409123 3491 ntAPPRIS ALT2 TSL 5 BASIC15.98■□□□□ 0.15
SIX5Q8N196 CTSD-207ENST00000636571 1790 ntAPPRIS ALT2 TSL 5 BASIC15.98■□□□□ 0.15
SIX5Q8N196 COL17A1-202ENST00000369733 5488 ntAPPRIS ALT2 TSL 5 BASIC15.98■□□□□ 0.15
SIX5Q8N196 TSNARE1-201ENST00000307180 1907 ntAPPRIS ALT2 TSL 5 BASIC15.98■□□□□ 0.15
SIX5Q8N196 SLC44A3-206ENST00000527077 1943 ntTSL 2 BASIC15.98■□□□□ 0.15
SIX5Q8N196 PILRB-208ENST00000452089 2099 ntAPPRIS P2 TSL 2 BASIC15.98■□□□□ 0.15
SIX5Q8N196 SPEG-201ENST00000312358 10782 ntAPPRIS P1 TSL 5 BASIC15.98■□□□□ 0.15
SIX5Q8N196 FENDRR-206ENST00000599749 2843 ntTSL 3 BASIC15.98■□□□□ 0.15
SIX5Q8N196 P2RY4-201ENST00000374519 1595 ntAPPRIS P1 BASIC15.98■□□□□ 0.15
SIX5Q8N196 IGLV4-69-201ENST00000390282 419 ntAPPRIS P1 BASIC15.98■□□□□ 0.15
SIX5Q8N196 AC244250.1-201ENST00000438185 451 ntTSL 2 BASIC15.98■□□□□ 0.15
SIX5Q8N196 RASA4-202ENST00000449970 2787 ntAPPRIS ALT1 TSL 2 BASIC15.98■□□□□ 0.15
SIX5Q8N196 LDHBP1-201ENST00000455730 1119 ntBASIC15.98■□□□□ 0.15
SIX5Q8N196 AP001790.1-201ENST00000511947 570 ntTSL 4 BASIC15.98■□□□□ 0.15
SIX5Q8N196 RNA5SP486-201ENST00000515961 83 ntBASIC15.98■□□□□ 0.15
SIX5Q8N196 CYGB-203ENST00000589145 788 ntTSL 3 BASIC15.98■□□□□ 0.15
SIX5Q8N196 ANGPTL8-203ENST00000591200 504 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
SIX5Q8N196 GRIA3-205ENST00000611689 936 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
SIX5Q8N196 AC128714.1-201ENST00000637035 887 ntBASIC15.98■□□□□ 0.15
SIX5Q8N196 NUCKS1-201ENST00000367142 6496 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
SIX5Q8N196 MITF-204ENST00000352241 4814 ntAPPRIS ALT1 TSL 1 (best) BASIC15.98■□□□□ 0.15
SIX5Q8N196 CTSB-232ENST00000534510 1989 ntAPPRIS P1 TSL 5 BASIC15.98■□□□□ 0.15
SIX5Q8N196 RUNX1T1-246ENST00000523629 7537 ntAPPRIS P3 TSL 5 BASIC15.98■□□□□ 0.15
SIX5Q8N196 SUFU-202ENST00000369902 5001 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
SIX5Q8N196 MAGEA2-202ENST00000598543 1662 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
SIX5Q8N196 ZCCHC17-206ENST00000616393 1534 ntTSL 5 BASIC15.98■□□□□ 0.15
SIX5Q8N196 ZNF815P-201ENST00000421890 1352 ntTSL 2 BASIC15.98■□□□□ 0.15
SIX5Q8N196 CYP4F3-202ENST00000585846 2056 ntAPPRIS ALT1 TSL 1 (best) BASIC15.98■□□□□ 0.15
SIX5Q8N196 DPF2-205ENST00000528416 2799 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
SIX5Q8N196 DUOX1-202ENST00000389037 5483 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
SIX5Q8N196 ITGAV-201ENST00000261023 7030 ntAPPRIS P3 TSL 1 (best) BASIC15.98■□□□□ 0.15
SIX5Q8N196 ELMSAN1-202ENST00000394071 7721 ntAPPRIS P2 TSL 1 (best) BASIC15.98■□□□□ 0.15
SIX5Q8N196 LSR-212ENST00000602122 2480 ntAPPRIS ALT2 TSL 2 BASIC15.97■□□□□ 0.15
SIX5Q8N196 SIGLEC7-201ENST00000305628 1469 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
SIX5Q8N196 PGAP3-201ENST00000300658 2737 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
SIX5Q8N196 CBS-201ENST00000352178 2583 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
SIX5Q8N196 LRCH3-201ENST00000334859 2258 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
SIX5Q8N196 GRM5-205ENST00000455756 7927 ntAPPRIS P3 TSL 2 BASIC15.97■□□□□ 0.15
SIX5Q8N196 AC007495.1-201ENST00000501259 2678 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
SIX5Q8N196 RBM33-205ENST00000392759 1580 ntTSL 5 BASIC15.97■□□□□ 0.15
SIX5Q8N196 ETV7-207ENST00000620358 1599 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
SIX5Q8N196 SLC29A2-202ENST00000357440 2514 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
SIX5Q8N196 AC100861.1-202ENST00000500853 1970 ntTSL 2 BASIC15.97■□□□□ 0.15
SIX5Q8N196 SGPP2-201ENST00000321276 3336 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
SIX5Q8N196 APAF1-201ENST00000333991 4539 ntTSL 5 BASIC15.97■□□□□ 0.15
SIX5Q8N196 RIMS3-202ENST00000372684 7235 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
SIX5Q8N196 PRAG1-201ENST00000615670 4903 ntAPPRIS P1 TSL 5 BASIC15.97■□□□□ 0.15
SIX5Q8N196 AL158154.2-201ENST00000585776 2208 ntTSL 2 BASIC15.97■□□□□ 0.15
SIX5Q8N196 CBY1-201ENST00000216029 1133 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
SIX5Q8N196 RANBP1-201ENST00000331821 837 ntAPPRIS P3 TSL 1 (best) BASIC15.97■□□□□ 0.15
SIX5Q8N196 DYDC1-201ENST00000372202 612 ntAPPRIS P1 TSL 3 BASIC15.97■□□□□ 0.15
SIX5Q8N196 C17orf51-202ENST00000412778 877 ntAPPRIS ALT2 TSL 3 BASIC15.97■□□□□ 0.15
SIX5Q8N196 POU5F1P6-201ENST00000466990 990 ntBASIC15.97■□□□□ 0.15
SIX5Q8N196 ANAPC15-214ENST00000543587 883 ntAPPRIS ALT1 TSL 1 (best) BASIC15.97■□□□□ 0.15
SIX5Q8N196 MIR3619-201ENST00000579667 83 ntBASIC15.97■□□□□ 0.15
SIX5Q8N196 AC068473.4-201ENST00000587527 585 ntTSL 4 BASIC15.97■□□□□ 0.15
SIX5Q8N196 TMEM101-204ENST00000587529 965 ntTSL 2 BASIC15.97■□□□□ 0.15
SIX5Q8N196 AL450472.2-201ENST00000603663 1156 ntBASIC15.97■□□□□ 0.15
SIX5Q8N196 C17orf50-202ENST00000604830 477 ntTSL 3 BASIC15.97■□□□□ 0.15
SIX5Q8N196 AL451050.2-201ENST00000606967 682 ntBASIC15.97■□□□□ 0.15
SIX5Q8N196 AL138709.1-201ENST00000614840 1693 ntBASIC15.97■□□□□ 0.15
SIX5Q8N196 SH3BP2-207ENST00000503393 9158 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
SIX5Q8N196 DIO3OS-208ENST00000556120 2473 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
SIX5Q8N196 SLIT3-201ENST00000332966 4895 ntAPPRIS ALT2 TSL 1 (best) BASIC15.97■□□□□ 0.15
SIX5Q8N196 ITGB1BP1-204ENST00000360635 4859 ntAPPRIS P1 TSL 5 BASIC15.97■□□□□ 0.15
SIX5Q8N196 SLC39A1-211ENST00000621013 2322 ntAPPRIS P1 TSL 2 BASIC15.97■□□□□ 0.15
SIX5Q8N196 SMIM5-201ENST00000375215 1546 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
SIX5Q8N196 TP53INP1-201ENST00000342697 5638 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
SIX5Q8N196 ZNF764-202ENST00000395091 2970 ntAPPRIS ALT1 TSL 2 BASIC15.97■□□□□ 0.15
SIX5Q8N196 SARAF-201ENST00000256255 2154 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
SIX5Q8N196 FOSB-209ENST00000590335 2170 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
SIX5Q8N196 NFIC-202ENST00000395111 1755 ntTSL 2 BASIC15.97■□□□□ 0.15
SIX5Q8N196 KCNJ2-AS1-201ENST00000590966 2442 ntBASIC15.97■□□□□ 0.15
SIX5Q8N196 PRDM1-203ENST00000369096 5164 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
SIX5Q8N196 HSFX2-201ENST00000598963 1365 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
SIX5Q8N196 EPHX2-202ENST00000517536 1600 ntTSL 5 BASIC15.97■□□□□ 0.15
SIX5Q8N196 PLA2G2D-202ENST00000617227 1856 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
Retrieved 100 of 98,524 protein–RNA pairs in 43.3 ms