Protein–RNA interactions for Protein: Q8IVD9

NUDCD3, NudC domain-containing protein 3, humanhuman

Predictions only

Length 361 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NUDCD3Q8IVD9 C11orf16-202ENST00000525780 1685 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
NUDCD3Q8IVD9 CCKAR-201ENST00000295589 1720 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
NUDCD3Q8IVD9 LIMS2-217ENST00000545738 1730 ntTSL 5 BASIC15.56■□□□□ 0.08
NUDCD3Q8IVD9 CEP164-201ENST00000278935 5630 ntAPPRIS P2 TSL 1 (best) BASIC15.56■□□□□ 0.08
NUDCD3Q8IVD9 MCM7-202ENST00000343023 1968 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
NUDCD3Q8IVD9 CCDC90B-213ENST00000529611 1986 ntTSL 2 BASIC15.56■□□□□ 0.08
NUDCD3Q8IVD9 PNPLA5-201ENST00000216177 2539 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
NUDCD3Q8IVD9 CA12-202ENST00000344366 2744 ntAPPRIS ALT2 TSL 1 (best) BASIC15.56■□□□□ 0.08
NUDCD3Q8IVD9 CMPK1-203ENST00000371873 2930 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
NUDCD3Q8IVD9 GTF2H2C-210ENST00000510979 2952 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
NUDCD3Q8IVD9 PRKD2-206ENST00000595515 3012 ntTSL 2 BASIC15.56■□□□□ 0.08
NUDCD3Q8IVD9 VLDLR-202ENST00000382099 3240 ntAPPRIS ALT1 TSL 1 (best) BASIC15.56■□□□□ 0.08
NUDCD3Q8IVD9 SPIDR-201ENST00000297423 3988 ntAPPRIS P3 TSL 1 (best) BASIC15.56■□□□□ 0.08
NUDCD3Q8IVD9 UBQLN1-202ENST00000376395 4118 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
NUDCD3Q8IVD9 AL669831.1-201ENST00000506640 6432 ntTSL 5 BASIC15.56■□□□□ 0.08
NUDCD3Q8IVD9 TMEM181-201ENST00000367090 5390 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
NUDCD3Q8IVD9 ZFYVE28-201ENST00000290974 4131 ntAPPRIS P3 TSL 1 (best) BASIC15.55■□□□□ 0.08
NUDCD3Q8IVD9 SCNN1D-205ENST00000379116 3044 ntAPPRIS P2 TSL 5 BASIC15.55■□□□□ 0.08
NUDCD3Q8IVD9 NR3C1-209ENST00000503201 2594 ntAPPRIS P3 TSL 1 (best) BASIC15.55■□□□□ 0.08
NUDCD3Q8IVD9 HTR3A-202ENST00000355556 2331 ntTSL 2 BASIC15.55■□□□□ 0.08
NUDCD3Q8IVD9 LMBRD1-202ENST00000370577 2209 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
NUDCD3Q8IVD9 LINC00691-201ENST00000432505 2232 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
NUDCD3Q8IVD9 SLC38A5-212ENST00000619100 2100 ntTSL 2 BASIC15.55■□□□□ 0.08
NUDCD3Q8IVD9 SLC38A5-214ENST00000622196 2100 ntTSL 5 BASIC15.55■□□□□ 0.08
NUDCD3Q8IVD9 TNFSF13-201ENST00000338784 1971 ntAPPRIS P3 TSL 1 (best) BASIC15.55■□□□□ 0.08
NUDCD3Q8IVD9 CHEK2-204ENST00000382580 1971 ntAPPRIS ALT2 TSL 1 (best) BASIC15.55■□□□□ 0.08
NUDCD3Q8IVD9 PHYH-203ENST00000396920 1829 ntTSL 5 BASIC15.55■□□□□ 0.08
NUDCD3Q8IVD9 MAP3K4-201ENST00000348824 5295 ntAPPRIS ALT2 TSL 5 BASIC15.55■□□□□ 0.08
NUDCD3Q8IVD9 LRRC42-201ENST00000319223 1727 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
NUDCD3Q8IVD9 DMAC2-201ENST00000221943 1692 ntAPPRIS P1 TSL 2 BASIC15.55■□□□□ 0.08
NUDCD3Q8IVD9 MTX3-201ENST00000509852 1655 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
NUDCD3Q8IVD9 TMEM161A-206ENST00000587583 1654 ntTSL 5 BASIC15.55■□□□□ 0.08
NUDCD3Q8IVD9 TATDN3-214ENST00000532324 1381 ntTSL 2 BASIC15.55■□□□□ 0.08
NUDCD3Q8IVD9 GHSR-201ENST00000241256 1172 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
NUDCD3Q8IVD9 NFU1-201ENST00000303698 1034 ntAPPRIS ALT2 TSL 1 (best) BASIC15.55■□□□□ 0.08
NUDCD3Q8IVD9 SLX1A-202ENST00000345535 762 ntAPPRIS ALT2 TSL 1 (best) BASIC15.55■□□□□ 0.08
NUDCD3Q8IVD9 SLX1B-202ENST00000351581 762 ntAPPRIS ALT2 TSL 1 (best) BASIC15.55■□□□□ 0.08
NUDCD3Q8IVD9 TNNC2-202ENST00000372557 780 ntTSL 3 BASIC15.55■□□□□ 0.08
NUDCD3Q8IVD9 AC002056.1-201ENST00000395613 760 ntBASIC15.55■□□□□ 0.08
NUDCD3Q8IVD9 FAM8A3P-201ENST00000427218 844 ntBASIC15.55■□□□□ 0.08
NUDCD3Q8IVD9 ZNF655-216ENST00000449244 544 ntTSL 4 BASIC15.55■□□□□ 0.08
NUDCD3Q8IVD9 MRPL2-208ENST00000489623 570 ntTSL 2 BASIC15.55■□□□□ 0.08
NUDCD3Q8IVD9 CNOT8-225ENST00000524105 904 ntTSL 2 BASIC15.55■□□□□ 0.08
NUDCD3Q8IVD9 ATP5G2-204ENST00000549164 745 ntAPPRIS P1 TSL 3 BASIC15.55■□□□□ 0.08
NUDCD3Q8IVD9 ABCD4-228ENST00000557588 763 ntTSL 3 BASIC15.55■□□□□ 0.08
NUDCD3Q8IVD9 AL138781.1-202ENST00000563018 775 ntTSL 3 BASIC15.55■□□□□ 0.08
NUDCD3Q8IVD9 COQ9-214ENST00000567933 882 ntTSL 3 BASIC15.55■□□□□ 0.08
NUDCD3Q8IVD9 C19orf33-202ENST00000588605 520 ntAPPRIS ALT2 TSL 1 (best) BASIC15.55■□□□□ 0.08
NUDCD3Q8IVD9 CALM3-211ENST00000598871 561 ntTSL 4 BASIC15.55■□□□□ 0.08
NUDCD3Q8IVD9 ATP5G2-209ENST00000602871 668 ntAPPRIS P1 TSL 2 BASIC15.55■□□□□ 0.08
NUDCD3Q8IVD9 UBE3D-208ENST00000626828 114 ntTSL 5 BASIC15.55■□□□□ 0.08
NUDCD3Q8IVD9 LHFPL4-201ENST00000287585 4880 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
NUDCD3Q8IVD9 EIF3J-AS1-201ENST00000313807 2863 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
NUDCD3Q8IVD9 ZNF664-204ENST00000538932 4321 ntAPPRIS P1 TSL 3 BASIC15.55■□□□□ 0.08
NUDCD3Q8IVD9 ALG9-201ENST00000398006 2345 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
NUDCD3Q8IVD9 NOX5-204ENST00000455873 2277 ntAPPRIS ALT2 TSL 1 (best) BASIC15.55■□□□□ 0.08
NUDCD3Q8IVD9 DNAH14-204ENST00000366849 2215 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
NUDCD3Q8IVD9 INTS4P1-203ENST00000641008 3683 ntBASIC15.55■□□□□ 0.08
NUDCD3Q8IVD9 LIN9-201ENST00000328205 3567 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
NUDCD3Q8IVD9 ALAS2-201ENST00000330807 2027 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
NUDCD3Q8IVD9 NMUR1-201ENST00000305141 3298 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
NUDCD3Q8IVD9 BBS1-225ENST00000630659 1934 ntTSL 5 BASIC15.55■□□□□ 0.08
NUDCD3Q8IVD9 PRSS8-201ENST00000317508 1872 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
NUDCD3Q8IVD9 FBLN2-203ENST00000404922 4318 ntAPPRIS P4 TSL 5 BASIC15.54■□□□□ 0.08
NUDCD3Q8IVD9 MAPK7-203ENST00000395602 3059 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
NUDCD3Q8IVD9 AC026688.2-201ENST00000518984 1734 ntTSL 3 BASIC15.54■□□□□ 0.08
NUDCD3Q8IVD9 RAPSN-201ENST00000298854 1671 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
NUDCD3Q8IVD9 FKBP5-203ENST00000539068 3827 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
NUDCD3Q8IVD9 KMT2E-202ENST00000311117 6874 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
NUDCD3Q8IVD9 CYP4F24P-201ENST00000586049 1580 ntBASIC15.54■□□□□ 0.08
NUDCD3Q8IVD9 AC092384.2-204ENST00000565053 2566 ntTSL 2 BASIC15.54■□□□□ 0.08
NUDCD3Q8IVD9 RSPRY1-202ENST00000537866 3586 ntAPPRIS P1 TSL 2 BASIC15.54■□□□□ 0.08
NUDCD3Q8IVD9 SHOX2-202ENST00000425436 1513 ntTSL 5 BASIC15.54■□□□□ 0.08
NUDCD3Q8IVD9 GPX3-209ENST00000614343 1478 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
NUDCD3Q8IVD9 ANP32A-203ENST00000465139 2440 ntAPPRIS P2 TSL 1 (best) BASIC15.54■□□□□ 0.08
NUDCD3Q8IVD9 PUS7-202ENST00000469408 2356 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
NUDCD3Q8IVD9 SIX5-204ENST00000622857 1401 ntTSL 5 BASIC15.54■□□□□ 0.08
NUDCD3Q8IVD9 YTHDF3-216ENST00000623280 5193 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
NUDCD3Q8IVD9 C1orf159-202ENST00000379320 2324 ntAPPRIS ALT2 TSL 2 BASIC15.54■□□□□ 0.08
NUDCD3Q8IVD9 LSM6-201ENST00000296581 2259 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
NUDCD3Q8IVD9 ASTN2-206ENST00000361477 4001 ntTSL 5 BASIC15.54■□□□□ 0.08
NUDCD3Q8IVD9 ATP23-201ENST00000300145 1245 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
NUDCD3Q8IVD9 MAL-203ENST00000353004 873 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
NUDCD3Q8IVD9 FAM19A5-204ENST00000406880 833 ntTSL 3 BASIC15.54■□□□□ 0.08
NUDCD3Q8IVD9 AC079781.3-201ENST00000449110 356 ntBASIC15.54■□□□□ 0.08
NUDCD3Q8IVD9 PPIE-208ENST00000470213 927 ntTSL 3 BASIC15.54■□□□□ 0.08
NUDCD3Q8IVD9 AC093909.1-201ENST00000504731 1122 ntBASIC15.54■□□□□ 0.08
NUDCD3Q8IVD9 AL356056.2-201ENST00000506914 669 ntTSL 4 BASIC15.54■□□□□ 0.08
NUDCD3Q8IVD9 AC079776.4-201ENST00000511039 504 ntBASIC15.54■□□□□ 0.08
NUDCD3Q8IVD9 MAL2-202ENST00000531508 892 ntTSL 3 BASIC15.54■□□□□ 0.08
NUDCD3Q8IVD9 NCAM1-AS1-202ENST00000533638 618 ntTSL 4 BASIC15.54■□□□□ 0.08
NUDCD3Q8IVD9 LDLRAD2-203ENST00000543870 1180 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
NUDCD3Q8IVD9 MARVELD3-206ENST00000567566 850 ntAPPRIS ALT2 TSL 1 (best) BASIC15.54■□□□□ 0.08
NUDCD3Q8IVD9 AC018845.2-201ENST00000568326 409 ntBASIC15.54■□□□□ 0.08
NUDCD3Q8IVD9 AC024592.3-202ENST00000586349 506 ntTSL 2 BASIC15.54■□□□□ 0.08
NUDCD3Q8IVD9 AC068137.2-201ENST00000605408 478 ntBASIC15.54■□□□□ 0.08
NUDCD3Q8IVD9 AC073263.1-201ENST00000616370 494 ntTSL 3 BASIC15.54■□□□□ 0.08
NUDCD3Q8IVD9 PSMA6-216ENST00000627895 484 ntTSL 5 BASIC15.54■□□□□ 0.08
NUDCD3Q8IVD9 PTPN13-203ENST00000427191 8487 ntAPPRIS ALT2 TSL 1 (best) BASIC15.54■□□□□ 0.08
NUDCD3Q8IVD9 ADAM33-206ENST00000617732 1971 ntTSL 5 BASIC15.54■□□□□ 0.08
Retrieved 100 of 98,524 protein–RNA pairs in 34.7 ms